RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 C14orf37Q86TY3 774 aa8.09□□□□□ -1.11
LSM6P2-201ENST00000552208 SLC24A3Q9HC58 644 aa8.09□□□□□ -1.11
LSM6P2-201ENST00000552208 MS4A4AQ96JQ5 239 aa8.08□□□□□ -1.12
LSM6P2-201ENST00000552208 CRISPLD2Q9H0B8 497 aa8.08□□□□□ -1.12
LSM6P2-201ENST00000552208 PDE4AP27815 886 aa8.06□□□□□ -1.12
LSM6P2-201ENST00000552208 CAMK2BQ13554 666 aa8.06□□□□□ -1.12
LSM6P2-201ENST00000552208 METRNQ9UJH8 293 aa8.06□□□□□ -1.12
LSM6P2-201ENST00000552208 NEUROD2Q15784 382 aa8.05□□□□□ -1.12
LSM6P2-201ENST00000552208 LARP6Q9BRS8 491 aaKnown RBP8.05□□□□□ -1.12
LSM6P2-201ENST00000552208 BARGINQ6ZT62 677 aa8.04□□□□□ -1.12
LSM6P2-201ENST00000552208 SMYD5Q6GMV2 418 aa8.03□□□□□ -1.12
LSM6P2-201ENST00000552208 SCUBE2Q9NQ36 999 aa8.03□□□□□ -1.12
LSM6P2-201ENST00000552208 C7P10643 843 aa8.02□□□□□ -1.13
LSM6P2-201ENST00000552208 SLC39A7Q92504 469 aa8.02□□□□□ -1.13
LSM6P2-201ENST00000552208 MMRN1Q13201 1228 aa8.01□□□□□ -1.13
LSM6P2-201ENST00000552208 DDX27Q96GQ7 796 aaKnown RBP8.01□□□□□ -1.13
LSM6P2-201ENST00000552208 ASTLQ6HA08 431 aaPredicted RBP7.99□□□□□ -1.13
LSM6P2-201ENST00000552208 ILDR1Q86SU0 546 aaPredicted RBP7.96□□□□□ -1.14
LSM6P2-201ENST00000552208 HOMEZQ8IX15 550 aa7.95□□□□□ -1.14
LSM6P2-201ENST00000552208 MLLT3P42568 568 aaPredicted RBP7.94□□□□□ -1.14
LSM6P2-201ENST00000552208 RBM26Q5T8P6 1007 aaKnown RBP7.94□□□□□ -1.14
LSM6P2-201ENST00000552208 AK7Q96M32 723 aa7.94□□□□□ -1.14
LSM6P2-201ENST00000552208 PHF12Q96QT6 1004 aa7.94□□□□□ -1.14
LSM6P2-201ENST00000552208 ATMINO43313 823 aaPredicted RBP7.93□□□□□ -1.14
LSM6P2-201ENST00000552208 SPNS2Q8IVW8 549 aa7.93□□□□□ -1.14
LSM6P2-201ENST00000552208 TMEM106CQ9BVX2 250 aa7.93□□□□□ -1.14
LSM6P2-201ENST00000552208 DAXXQ9UER7 740 aaPredicted RBP7.93□□□□□ -1.14
LSM6P2-201ENST00000552208 GPHNQ9NQX3 736 aaPredicted RBP7.92□□□□□ -1.14
LSM6P2-201ENST00000552208 TRPC6Q9Y210 931 aa7.91□□□□□ -1.14
LSM6P2-201ENST00000552208 TIE1P35590 1138 aa7.9□□□□□ -1.14
LSM6P2-201ENST00000552208 PPP1R15BQ5SWA1 713 aa7.9□□□□□ -1.14
LSM6P2-201ENST00000552208 GPIHBP1Q8IV16 184 aa7.9□□□□□ -1.14
LSM6P2-201ENST00000552208 GPBP1L1Q9HC44 474 aaPredicted RBP7.9□□□□□ -1.14
LSM6P2-201ENST00000552208 MS4A3Q96HJ5 214 aa7.89□□□□□ -1.15
LSM6P2-201ENST00000552208 EMILIN3Q9NT22 766 aa7.89□□□□□ -1.15
LSM6P2-201ENST00000552208 TRIM66O15016 1216 aa7.88□□□□□ -1.15
LSM6P2-201ENST00000552208 GOLGA2Q08379 1002 aa7.88□□□□□ -1.15
LSM6P2-201ENST00000552208 MKRN3Q13064 507 aaKnown RBP7.88□□□□□ -1.15
LSM6P2-201ENST00000552208 SUPT5HO00267 1087 aaKnown RBP7.87□□□□□ -1.15
LSM6P2-201ENST00000552208 PDIA6Q15084 440 aa7.87□□□□□ -1.15
LSM6P2-201ENST00000552208 KDM4CQ9H3R0 1056 aa7.87□□□□□ -1.15
LSM6P2-201ENST00000552208 SPDYE16A6NNV3 312 aaPredicted RBP7.86□□□□□ -1.15
LSM6P2-201ENST00000552208 GPR37O15354 613 aa7.86□□□□□ -1.15
LSM6P2-201ENST00000552208 DPYSL4O14531 572 aa7.85□□□□□ -1.15
LSM6P2-201ENST00000552208 KRI1Q8N9T8 703 aaKnown RBP7.85□□□□□ -1.15
LSM6P2-201ENST00000552208 PDE4DQ08499 809 aa7.84□□□□□ -1.15
LSM6P2-201ENST00000552208 DSG2Q14126 1118 aa7.84□□□□□ -1.15
LSM6P2-201ENST00000552208 IL27Q8NEV9 243 aa7.84□□□□□ -1.15
LSM6P2-201ENST00000552208 TTLL13PA6NNM8 815 aa7.82□□□□□ -1.16
LSM6P2-201ENST00000552208 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.82□□□□□ -1.16
LSM6P2-201ENST00000552208 POTEFA5A3E0 1075 aa7.81□□□□□ -1.16
LSM6P2-201ENST00000552208 ST18O60284 1047 aa7.81□□□□□ -1.16
LSM6P2-201ENST00000552208 FOXK1P85037 733 aa7.81□□□□□ -1.16
LSM6P2-201ENST00000552208 DPY19L2Q6NUT2 758 aa7.8□□□□□ -1.16
LSM6P2-201ENST00000552208 ATN1P54259 1190 aaPredicted RBP7.79□□□□□ -1.16
LSM6P2-201ENST00000552208 MICALL2Q8IY33 904 aa7.79□□□□□ -1.16
LSM6P2-201ENST00000552208 ZMYND15Q9H091 742 aa7.79□□□□□ -1.16
LSM6P2-201ENST00000552208 BMP2KQ9NSY1 1161 aaPredicted RBP7.79□□□□□ -1.16
LSM6P2-201ENST00000552208 MINK1Q8N4C8 1332 aaPredicted RBP7.78□□□□□ -1.16
LSM6P2-201ENST00000552208 KIF3CO14782 793 aa7.77□□□□□ -1.17
LSM6P2-201ENST00000552208 TMEM121BQ9BXQ6 578 aaPredicted RBP7.77□□□□□ -1.17
LSM6P2-201ENST00000552208 IER5LQ5T953 404 aa7.76□□□□□ -1.17
LSM6P2-201ENST00000552208 PDCD7Q8N8D1 485 aaKnown RBP7.76□□□□□ -1.17
LSM6P2-201ENST00000552208 FAM117AQ9C073 453 aa7.76□□□□□ -1.17
LSM6P2-201ENST00000552208 TRIM35Q9UPQ4 493 aa7.76□□□□□ -1.17
LSM6P2-201ENST00000552208 PLEKHG3A1L390 1219 aa7.75□□□□□ -1.17
LSM6P2-201ENST00000552208 AMHR2Q16671 573 aa7.75□□□□□ -1.17
LSM6P2-201ENST00000552208 IRF6O14896 467 aa7.74□□□□□ -1.17
LSM6P2-201ENST00000552208 MAP2K5Q13163 448 aa7.74□□□□□ -1.17
LSM6P2-201ENST00000552208 PLPP6Q8IY26 295 aa7.74□□□□□ -1.17
LSM6P2-201ENST00000552208 TMC2Q8TDI7 906 aa7.74□□□□□ -1.17
LSM6P2-201ENST00000552208 RSPH6AQ9H0K4 717 aa7.74□□□□□ -1.17
LSM6P2-201ENST00000552208 OSBPP22059 807 aa7.73□□□□□ -1.17
LSM6P2-201ENST00000552208 C2orf72A6NCS6 295 aa7.72□□□□□ -1.17
LSM6P2-201ENST00000552208 PTGER2P43116 358 aa7.72□□□□□ -1.17
LSM6P2-201ENST00000552208 CCDC102AQ96A19 550 aa7.72□□□□□ -1.17
LSM6P2-201ENST00000552208 GNPATO15228 680 aa7.7□□□□□ -1.18
LSM6P2-201ENST00000552208 IRX5P78411 483 aaPredicted RBP7.7□□□□□ -1.18
LSM6P2-201ENST00000552208 PARP9Q8IXQ6 854 aa7.7□□□□□ -1.18
LSM6P2-201ENST00000552208 DDRGK1Q96HY6 314 aa7.7□□□□□ -1.18
LSM6P2-201ENST00000552208 NUTM2FA1L443 756 aa7.69□□□□□ -1.18
LSM6P2-201ENST00000552208 ZNF316A6NFI3 1004 aaPredicted RBP7.69□□□□□ -1.18
LSM6P2-201ENST00000552208 GRXCR2A6NFK2 248 aa7.69□□□□□ -1.18
LSM6P2-201ENST00000552208 UBTFP17480 764 aaKnown RBP7.69□□□□□ -1.18
LSM6P2-201ENST00000552208 MAP3K9P80192 1104 aa7.69□□□□□ -1.18
LSM6P2-201ENST00000552208 OXER1Q8TDS5 423 aa7.69□□□□□ -1.18
LSM6P2-201ENST00000552208 OCEL1Q9H607 264 aa7.69□□□□□ -1.18
LSM6P2-201ENST00000552208 FECHP22830 423 aa7.68□□□□□ -1.18
LSM6P2-201ENST00000552208 HIC1Q14526 733 aa7.68□□□□□ -1.18
LSM6P2-201ENST00000552208 GOPCQ9HD26 462 aa7.68□□□□□ -1.18
LSM6P2-201ENST00000552208 BOLA1Q9Y3E2 137 aa7.68□□□□□ -1.18
LSM6P2-201ENST00000552208 PRIM1P49642 420 aaKnown RBP7.67□□□□□ -1.18
LSM6P2-201ENST00000552208 SLAIN1Q8ND83 568 aa7.67□□□□□ -1.18
LSM6P2-201ENST00000552208 FCHSD2O94868 740 aa7.66□□□□□ -1.18
LSM6P2-201ENST00000552208 C1orf115Q9H7X2 142 aa7.66□□□□□ -1.18
LSM6P2-201ENST00000552208 COLQQ9Y215 455 aaPredicted RBP7.66□□□□□ -1.18
LSM6P2-201ENST00000552208 ONECUT3O60422 494 aaPredicted RBP7.65□□□□□ -1.18
LSM6P2-201ENST00000552208 SEC24BO95487 1268 aa7.65□□□□□ -1.18
LSM6P2-201ENST00000552208 PLCG2P16885 1265 aa7.64□□□□□ -1.19
LSM6P2-201ENST00000552208 TMEM92Q6UXU6 159 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms