RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 MYO5CQ9NQX4 1742 aa27.26■■□□□ 1.95
RAB5C-209ENST00000552162 HSPA2P54652 639 aa27.25■■□□□ 1.95
RAB5C-209ENST00000552162 FMN1Q68DA7 1419 aa27.23■■□□□ 1.95
RAB5C-209ENST00000552162 MLECQ14165 292 aa27.22■■□□□ 1.95
RAB5C-209ENST00000552162 KIF14Q15058 1648 aa27.19■■□□□ 1.94
RAB5C-209ENST00000552162 C9orf84Q5VXU9 1444 aa27.18■■□□□ 1.94
RAB5C-209ENST00000552162 ARHGEF12Q9NZN5 1544 aa27.18■■□□□ 1.94
RAB5C-209ENST00000552162 ATP1B4Q9UN42 357 aaPredicted RBP27.18■■□□□ 1.94
RAB5C-209ENST00000552162 ATP10AO60312 1499 aa27.18■■□□□ 1.94
RAB5C-209ENST00000552162 ARHGAP35Q9NRY4 1499 aa27.17■■□□□ 1.94
RAB5C-209ENST00000552162 EHMT2Q96KQ7 1210 aa27.16■■□□□ 1.94
RAB5C-209ENST00000552162 UBTFP17480 764 aaKnown RBP27.15■■□□□ 1.94
RAB5C-209ENST00000552162 EFCAB2Q5VUJ9 269 aa27.15■■□□□ 1.94
RAB5C-209ENST00000552162 CDK11AQ9UQ88 783 aaPredicted RBP27.13■■□□□ 1.93
RAB5C-209ENST00000552162 ZNF518AQ6AHZ1 1483 aa27.13■■□□□ 1.93
RAB5C-209ENST00000552162 PREX1Q8TCU6 1659 aa27.12■■□□□ 1.93
RAB5C-209ENST00000552162 ARHGAP5Q13017 1502 aa27.11■■□□□ 1.93
RAB5C-209ENST00000552162 TROQ12816 1431 aaPredicted RBP27.1■■□□□ 1.93
RAB5C-209ENST00000552162 KDM5CP41229 1560 aa27.09■■□□□ 1.93
RAB5C-209ENST00000552162 LRRIQ1Q96JM4 1722 aa27.09■■□□□ 1.93
RAB5C-209ENST00000552162 CLIP1P30622 1438 aa27.07■■□□□ 1.92
RAB5C-209ENST00000552162 DIP2CQ9Y2E4 1556 aa27.04■■□□□ 1.92
RAB5C-209ENST00000552162 CERKQ8TCT0 537 aa27.03■■□□□ 1.92
RAB5C-209ENST00000552162 CDC42BPBQ9Y5S2 1711 aa27.02■■□□□ 1.92
RAB5C-209ENST00000552162 CEBPAP49715 358 aaPredicted RBP27.01■■□□□ 1.91
RAB5C-209ENST00000552162 AFAP1Q8N556 730 aa27.01■■□□□ 1.91
RAB5C-209ENST00000552162 REREQ9P2R6 1566 aa27■■□□□ 1.91
RAB5C-209ENST00000552162 ABCA6Q8N139 1617 aa26.99■■□□□ 1.91
RAB5C-209ENST00000552162 PREX2Q70Z35 1606 aa26.98■■□□□ 1.91
RAB5C-209ENST00000552162 MYT1LQ9UL68 1186 aa26.97■■□□□ 1.91
RAB5C-209ENST00000552162 STRCQ7RTU9 1775 aa26.96■■□□□ 1.91
RAB5C-209ENST00000552162 UHRF1BP1Q6BDS2 1440 aa26.95■■□□□ 1.9
RAB5C-209ENST00000552162 ABCC1P33527 1531 aa26.95■■□□□ 1.9
RAB5C-209ENST00000552162 MLH3Q9UHC1 1453 aa26.94■■□□□ 1.9
RAB5C-209ENST00000552162 ITSN2Q9NZM3 1697 aa26.94■■□□□ 1.9
RAB5C-209ENST00000552162 C3P01024 1663 aa26.92■■□□□ 1.9
RAB5C-209ENST00000552162 CCDC18Q5T9S5 1454 aa26.92■■□□□ 1.9
RAB5C-209ENST00000552162 SETD1BQ9UPS6 1966 aaKnown RBP26.91■■□□□ 1.9
RAB5C-209ENST00000552162 AGLP35573 1532 aa26.9■■□□□ 1.9
RAB5C-209ENST00000552162 TRAPPC8Q9Y2L5 1435 aa26.9■■□□□ 1.9
RAB5C-209ENST00000552162 CASKIN1Q8WXD9 1431 aa26.89■■□□□ 1.89
RAB5C-209ENST00000552162 CHIC1Q5VXU3 224 aa26.87■■□□□ 1.89
RAB5C-209ENST00000552162 DMRT2Q9Y5R5 561 aa26.87■■□□□ 1.89
RAB5C-209ENST00000552162 CDC42BPAQ5VT25 1732 aa26.87■■□□□ 1.89
RAB5C-209ENST00000552162 KIDINS220Q9ULH0 1771 aa26.86■■□□□ 1.89
RAB5C-209ENST00000552162 ESF1Q9H501 851 aaKnown RBP26.82■■□□□ 1.88
RAB5C-209ENST00000552162 FYCO1Q9BQS8 1478 aa26.79■■□□□ 1.88
RAB5C-209ENST00000552162 SAMD9LQ8IVG5 1584 aa26.77■■□□□ 1.88
RAB5C-209ENST00000552162 PTPRTO14522 1441 aa26.77■■□□□ 1.88
RAB5C-209ENST00000552162 CNTLNQ9NXG0 1405 aa26.77■■□□□ 1.88
RAB5C-209ENST00000552162 SYCP2Q9BX26 1530 aa26.75■■□□□ 1.87
RAB5C-209ENST00000552162 MROH2AA6NES4 1674 aa26.73■■□□□ 1.87
RAB5C-209ENST00000552162 ZNF777Q9ULD5 760 aaPredicted RBP26.7■■□□□ 1.86
RAB5C-209ENST00000552162 NCOA1Q15788 1441 aa26.7■■□□□ 1.86
RAB5C-209ENST00000552162 SUPT6HQ7KZ85 1726 aaKnown RBP26.69■■□□□ 1.86
RAB5C-209ENST00000552162 GPATCH8Q9UKJ3 1502 aaKnown RBP26.69■■□□□ 1.86
RAB5C-209ENST00000552162 LTBP4Q8N2S1 1624 aa26.68■■□□□ 1.86
RAB5C-209ENST00000552162 NPATQ14207 1427 aa26.67■■□□□ 1.86
RAB5C-209ENST00000552162 ATP7AQ04656 1500 aa26.66■■□□□ 1.86
RAB5C-209ENST00000552162 SPAG9O60271 1321 aaKnown RBP26.65■■□□□ 1.86
RAB5C-209ENST00000552162 DISP3Q9P2K9 1392 aa26.65■■□□□ 1.86
RAB5C-209ENST00000552162 INO80Q9ULG1 1556 aaPredicted RBP26.65■■□□□ 1.86
RAB5C-209ENST00000552162 CAMSAP1Q5T5Y3 1602 aa26.65■■□□□ 1.86
RAB5C-209ENST00000552162 PLXNC1O60486 1568 aa26.63■■□□□ 1.85
RAB5C-209ENST00000552162 CLTCQ00610 1675 aaKnown RBP26.63■■□□□ 1.85
RAB5C-209ENST00000552162 HNRNPMP52272 730 aaKnown RBP eCLIP26.62■■□□□ 1.85
RAB5C-209ENST00000552162 ZMYM3Q14202 1370 aa26.61■■□□□ 1.85
RAB5C-209ENST00000552162 KIAA1107Q9UPP5 1409 aa26.61■■□□□ 1.85
RAB5C-209ENST00000552162 IQSEC2Q5JU85 1478 aa26.61■■□□□ 1.85
RAB5C-209ENST00000552162 PLEKHH2Q8IVE3 1493 aa26.61■■□□□ 1.85
RAB5C-209ENST00000552162 MYO3AQ8NEV4 1616 aa26.59■■□□□ 1.85
RAB5C-209ENST00000552162 ZNF142P52746 1687 aaPredicted RBP26.59■■□□□ 1.85
RAB5C-209ENST00000552162 A2MP01023 1474 aa26.58■■□□□ 1.85
RAB5C-209ENST00000552162 CFDP1Q9UEE9 299 aaPredicted RBP26.57■■□□□ 1.84
RAB5C-209ENST00000552162 SPATA31D1Q6ZQQ2 1576 aa26.57■■□□□ 1.84
RAB5C-209ENST00000552162 CCNB3Q8WWL7 1395 aa26.57■■□□□ 1.84
RAB5C-209ENST00000552162 ILDR2Q71H61 639 aa26.55■■□□□ 1.84
RAB5C-209ENST00000552162 ADGBQ8N7X0 1667 aa26.54■■□□□ 1.84
RAB5C-209ENST00000552162 CEP170BQ9Y4F5 1589 aaPredicted RBP26.53■■□□□ 1.84
RAB5C-209ENST00000552162 MTUS2Q5JR59 1369 aa26.52■■□□□ 1.84
RAB5C-209ENST00000552162 PTPRKQ15262 1439 aa26.51■■□□□ 1.83
RAB5C-209ENST00000552162 PLA2R1Q13018 1463 aa26.5■■□□□ 1.83
RAB5C-209ENST00000552162 NCKAP5LQ9HCH0 1330 aa26.5■■□□□ 1.83
RAB5C-209ENST00000552162 TIAM1Q13009 1591 aa26.5■■□□□ 1.83
RAB5C-209ENST00000552162 GGT6Q6P531 493 aa26.48■■□□□ 1.83
RAB5C-209ENST00000552162 ZNF335Q9H4Z2 1342 aaPredicted RBP26.46■■□□□ 1.83
RAB5C-209ENST00000552162 TCOF1Q13428 1488 aaKnown RBP26.46■■□□□ 1.83
RAB5C-209ENST00000552162 EHBP1L1Q8N3D4 1523 aa26.45■■□□□ 1.83
RAB5C-209ENST00000552162 SOCS7O14512 581 aa26.44■■□□□ 1.82
RAB5C-209ENST00000552162 PKD2Q13563 968 aa26.44■■□□□ 1.82
RAB5C-209ENST00000552162 MBD5Q9P267 1494 aa26.42■■□□□ 1.82
RAB5C-209ENST00000552162 ZNF644Q9H582 1327 aaPredicted RBP26.42■■□□□ 1.82
RAB5C-209ENST00000552162 PPP6R1Q9UPN7 881 aa26.41■■□□□ 1.82
RAB5C-209ENST00000552162 RTEL1-TNFRSF6BF6WH68 1400 aa26.39■■□□□ 1.81
RAB5C-209ENST00000552162 A2ML1A8K2U0 1454 aa26.38■■□□□ 1.81
RAB5C-209ENST00000552162 DNMT1P26358 1616 aaKnown RBP26.37■■□□□ 1.81
RAB5C-209ENST00000552162 CEP162Q5TB80 1403 aa26.37■■□□□ 1.81
RAB5C-209ENST00000552162 UBAP1LF5GYI3 381 aa26.35■■□□□ 1.81
RAB5C-209ENST00000552162 DHX29Q7Z478 1369 aaKnown RBP26.34■■□□□ 1.81
RAB5C-209ENST00000552162 POLR1AO95602 1720 aaPredicted RBP26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms