RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 ABCC2Q92887 1545 aa27.95■■■□□ 2.07
BRF1-215ENST00000549655 CDC42BPAQ5VT25 1732 aa27.92■■■□□ 2.06
BRF1-215ENST00000549655 ROCK1Q13464 1354 aa27.91■■■□□ 2.06
BRF1-215ENST00000549655 ZNF777Q9ULD5 760 aaPredicted RBP27.9■■■□□ 2.06
BRF1-215ENST00000549655 SIN3AQ96ST3 1273 aa27.87■■■□□ 2.05
BRF1-215ENST00000549655 DIEXFQ68CQ4 756 aaKnown RBP27.85■■■□□ 2.05
BRF1-215ENST00000549655 KDM6BO15054 1643 aa27.85■■■□□ 2.05
BRF1-215ENST00000549655 NEUROD1Q13562 356 aa27.84■■■□□ 2.05
BRF1-215ENST00000549655 UHRF1BP1LA0JNW5 1464 aa27.83■■■□□ 2.05
BRF1-215ENST00000549655 CROCC2H7BZ55 1655 aa27.78■■■□□ 2.04
BRF1-215ENST00000549655 TRIM52Q96A61 297 aa27.78■■■□□ 2.04
BRF1-215ENST00000549655 ZCCHC11Q5TAX3 1644 aaKnown RBP27.76■■■□□ 2.03
BRF1-215ENST00000549655 TIMELESSQ9UNS1 1208 aa27.76■■■□□ 2.03
BRF1-215ENST00000549655 ADGBQ8N7X0 1667 aa27.75■■■□□ 2.03
BRF1-215ENST00000549655 KDM5BQ9UGL1 1544 aa27.75■■■□□ 2.03
BRF1-215ENST00000549655 PREX2Q70Z35 1606 aa27.74■■■□□ 2.03
BRF1-215ENST00000549655 NCOA1Q15788 1441 aa27.74■■■□□ 2.03
BRF1-215ENST00000549655 ADGRL2O95490 1459 aa27.73■■■□□ 2.03
BRF1-215ENST00000549655 CDC42BPBQ9Y5S2 1711 aa27.73■■■□□ 2.03
BRF1-215ENST00000549655 OSCARQ8IYS5 282 aa27.73■■■□□ 2.03
BRF1-215ENST00000549655 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.73■■■□□ 2.03
BRF1-215ENST00000549655 ACIN1Q9UKV3 1341 aaKnown RBP27.72■■■□□ 2.03
BRF1-215ENST00000549655 TTC37Q6PGP7 1564 aa27.72■■■□□ 2.03
BRF1-215ENST00000549655 ANKRD30AQ9BXX3 1397 aa27.69■■■□□ 2.02
BRF1-215ENST00000549655 DENND4BO75064 1496 aaPredicted RBP27.68■■■□□ 2.02
BRF1-215ENST00000549655 SHANK2Q9UPX8 1470 aa27.68■■■□□ 2.02
BRF1-215ENST00000549655 KCNH8Q96L42 1107 aa27.68■■■□□ 2.02
BRF1-215ENST00000549655 MPHOSPH9Q99550 1183 aa27.68■■■□□ 2.02
BRF1-215ENST00000549655 SAMD9LQ8IVG5 1584 aa27.67■■■□□ 2.02
BRF1-215ENST00000549655 HNRNPMP52272 730 aaKnown RBP eCLIP27.66■■■□□ 2.022e-7■■■■■ 35.3
BRF1-215ENST00000549655 ARHGEF5Q12774 1597 aa27.65■■■□□ 2.02
BRF1-215ENST00000549655 MBD5Q9P267 1494 aa27.65■■■□□ 2.02
BRF1-215ENST00000549655 C9orf84Q5VXU9 1444 aa27.64■■■□□ 2.02
BRF1-215ENST00000549655 TSPY4P0CV99 314 aa27.63■■■□□ 2.01
BRF1-215ENST00000549655 TSPY10P0CW01 314 aa27.63■■■□□ 2.01
BRF1-215ENST00000549655 ARHGAP5Q13017 1502 aa27.63■■■□□ 2.01
BRF1-215ENST00000549655 MYO5CQ9NQX4 1742 aa27.63■■■□□ 2.01
BRF1-215ENST00000549655 TONSLQ96HA7 1378 aa27.61■■■□□ 2.01
BRF1-215ENST00000549655 PPP1R15AO75807 674 aaPredicted RBP27.59■■■□□ 2.01
BRF1-215ENST00000549655 RSPH4AQ5TD94 716 aa27.58■■■□□ 2.01
BRF1-215ENST00000549655 CCDC141Q6ZP82 1450 aa27.58■■■□□ 2.01
BRF1-215ENST00000549655 ANKRD50Q9ULJ7 1429 aa27.56■■■□□ 2
BRF1-215ENST00000549655 SYCP2Q9BX26 1530 aa27.55■■■□□ 2
BRF1-215ENST00000549655 PLCH2O75038 1416 aa27.54■■■□□ 2
BRF1-215ENST00000549655 SLC4A1APQ9BWU0 796 aaKnown RBP27.53■■■□□ 2
BRF1-215ENST00000549655 FOXD1Q16676 465 aa27.52■■■□□ 2
BRF1-215ENST00000549655 PLEKHH2Q8IVE3 1493 aa27.51■■□□□ 1.99
BRF1-215ENST00000549655 KIAA1107Q9UPP5 1409 aa27.51■■□□□ 1.99
BRF1-215ENST00000549655 PZPP20742 1482 aa27.5■■□□□ 1.99
BRF1-215ENST00000549655 WDR7Q9Y4E6 1490 aa27.5■■□□□ 1.99
BRF1-215ENST00000549655 KIF15Q9NS87 1388 aa27.49■■□□□ 1.99
BRF1-215ENST00000549655 ANKRD30BQ9BXX2 1392 aa27.47■■□□□ 1.99
BRF1-215ENST00000549655 EFCAB2Q5VUJ9 269 aa27.47■■□□□ 1.99
BRF1-215ENST00000549655 MAST1Q9Y2H9 1570 aa27.44■■□□□ 1.98
BRF1-215ENST00000549655 ARHGEF12Q9NZN5 1544 aa27.42■■□□□ 1.98
BRF1-215ENST00000549655 ARAP3Q8WWN8 1544 aa27.4■■□□□ 1.98
BRF1-215ENST00000549655 ASXL2Q76L83 1435 aa27.4■■□□□ 1.98
BRF1-215ENST00000549655 ABCC1P33527 1531 aa27.38■■□□□ 1.97
BRF1-215ENST00000549655 NUP155O75694 1391 aa27.38■■□□□ 1.97
BRF1-215ENST00000549655 RPRD2Q5VT52 1461 aaKnown RBP27.37■■□□□ 1.97
BRF1-215ENST00000549655 MIER1Q8N108 512 aa27.36■■□□□ 1.97
BRF1-215ENST00000549655 NPM1P06748 294 aaKnown RBP eCLIP27.35■■□□□ 1.97
BRF1-215ENST00000549655 PKD2Q13563 968 aa27.35■■□□□ 1.97
BRF1-215ENST00000549655 ABCA9Q8IUA7 1624 aa27.35■■□□□ 1.97
BRF1-215ENST00000549655 KDM5DQ9BY66 1539 aa27.35■■□□□ 1.97
BRF1-215ENST00000549655 PLXNC1O60486 1568 aa27.34■■□□□ 1.97
BRF1-215ENST00000549655 L3MBTL2Q969R5 705 aa27.31■■□□□ 1.96
BRF1-215ENST00000549655 TRAPPC8Q9Y2L5 1435 aa27.31■■□□□ 1.96
BRF1-215ENST00000549655 FANCAO15360 1455 aa27.27■■□□□ 1.96
BRF1-215ENST00000549655 TEX14Q8IWB6 1497 aa27.25■■□□□ 1.95
BRF1-215ENST00000549655 DUOX2Q9NRD8 1548 aa27.25■■□□□ 1.95
BRF1-215ENST00000549655 HIRIP3Q9BW71 556 aaPredicted RBP27.22■■□□□ 1.95
BRF1-215ENST00000549655 FAM135AQ9P2D6 1515 aa27.22■■□□□ 1.95
BRF1-215ENST00000549655 AFAP1Q8N556 730 aa27.22■■□□□ 1.95
BRF1-215ENST00000549655 UNC13BO14795 1591 aa27.21■■□□□ 1.95
BRF1-215ENST00000549655 SPAG9O60271 1321 aaKnown RBP27.21■■□□□ 1.95
BRF1-215ENST00000549655 ERBINQ96RT1 1412 aa27.19■■□□□ 1.94
BRF1-215ENST00000549655 RTEL1-TNFRSF6BF6WH68 1400 aa27.19■■□□□ 1.94
BRF1-215ENST00000549655 ADGRL1O94910 1474 aa27.17■■□□□ 1.94
BRF1-215ENST00000549655 ZFYVE16Q7Z3T8 1539 aa27.15■■□□□ 1.94
BRF1-215ENST00000549655 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.15■■□□□ 1.945e-6■■■□□ 17
BRF1-215ENST00000549655 SCAPERQ9BY12 1400 aa27.14■■□□□ 1.94
BRF1-215ENST00000549655 NBPF8Q3BBV2 869 aa27.11■■□□□ 1.93
BRF1-215ENST00000549655 IQGAP3Q86VI3 1631 aa27.11■■□□□ 1.93
BRF1-215ENST00000549655 CD109Q6YHK3 1445 aa27.1■■□□□ 1.93
BRF1-215ENST00000549655 MAGI2Q86UL8 1455 aa27.1■■□□□ 1.93
BRF1-215ENST00000549655 DDX10Q13206 875 aaKnown RBP27.09■■□□□ 1.93
BRF1-215ENST00000549655 ATP7AQ04656 1500 aa27.08■■□□□ 1.93
BRF1-215ENST00000549655 INO80Q9ULG1 1556 aaPredicted RBP27.08■■□□□ 1.93
BRF1-215ENST00000549655 CYB5RLQ6IPT4 315 aa27.06■■□□□ 1.92
BRF1-215ENST00000549655 HSPA5P11021 654 aaKnown RBP27.06■■□□□ 1.92
BRF1-215ENST00000549655 EIF4G2P78344 907 aaKnown RBP eCLIP27.05■■□□□ 1.92
BRF1-215ENST00000549655 RIMBP3CA6NJZ7 1639 aa27.03■■□□□ 1.92
BRF1-215ENST00000549655 RIMBP3BA6NNM3 1639 aa27.03■■□□□ 1.92
BRF1-215ENST00000549655 RIMBP3Q9UFD9 1639 aa27.03■■□□□ 1.92
BRF1-215ENST00000549655 CFAP74Q9C0B2 1584 aa27.03■■□□□ 1.92
BRF1-215ENST00000549655 MYT1LQ9UL68 1186 aa27.02■■□□□ 1.92
BRF1-215ENST00000549655 ZNF518AQ6AHZ1 1483 aa26.99■■□□□ 1.91
BRF1-215ENST00000549655 PLA2R1Q13018 1463 aa26.98■■□□□ 1.91
BRF1-215ENST00000549655 CCDC144AA2RUR9 1427 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms