RNA–Protein interactions for RNA: ENST00000546243.5

THRA-204, Transcript of thyroid hormone receptor alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene THRA, Length 1,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-204ENST00000546243 ADCY10Q96PN6 1610 aa35.9■■■■□ 3.34
THRA-204ENST00000546243 TROQ12816 1431 aaPredicted RBP35.9■■■■□ 3.34
THRA-204ENST00000546243 ITSN2Q9NZM3 1697 aa35.89■■■■□ 3.34
THRA-204ENST00000546243 DAPK1P53355 1430 aa35.87■■■■□ 3.33
THRA-204ENST00000546243 RRP7BPQ9NSQ0 103 aa35.86■■■■□ 3.33
THRA-204ENST00000546243 ARID3CA6NKF2 412 aa35.85■■■■□ 3.33
THRA-204ENST00000546243 PLB1Q6P1J6 1458 aa35.82■■■■□ 3.32
THRA-204ENST00000546243 CHIC2Q9UKJ5 165 aa35.81■■■■□ 3.32
THRA-204ENST00000546243 KDM6BO15054 1643 aa35.81■■■■□ 3.32
THRA-204ENST00000546243 ABCC5O15440 1437 aa35.78■■■■□ 3.32
THRA-204ENST00000546243 PTPRGP23470 1445 aa35.76■■■■□ 3.32
THRA-204ENST00000546243 ABCA8O94911 1581 aa35.76■■■■□ 3.31
THRA-204ENST00000546243 DENND4BO75064 1496 aaPredicted RBP35.75■■■■□ 3.31
THRA-204ENST00000546243 KDM5BQ9UGL1 1544 aa35.73■■■■□ 3.31
THRA-204ENST00000546243 CAMSAP2Q08AD1 1489 aa35.69■■■■□ 3.3
THRA-204ENST00000546243 ADGBQ8N7X0 1667 aa35.69■■■■□ 3.3
THRA-204ENST00000546243 TRIM52Q96A61 297 aa35.68■■■■□ 3.3
THRA-204ENST00000546243 GPATCH8Q9UKJ3 1502 aaKnown RBP35.68■■■■□ 3.3
THRA-204ENST00000546243 KIF14Q15058 1648 aa35.67■■■■□ 3.3
THRA-204ENST00000546243 CROCC2H7BZ55 1655 aa35.64■■■■□ 3.3
THRA-204ENST00000546243 MPHOSPH9Q99550 1183 aa35.63■■■■□ 3.29
THRA-204ENST00000546243 CFDP1Q9UEE9 299 aaPredicted RBP35.6■■■■□ 3.29
THRA-204ENST00000546243 ZNF644Q9H582 1327 aaPredicted RBP35.6■■■■□ 3.29
THRA-204ENST00000546243 ADGRL2O95490 1459 aa35.59■■■■□ 3.29
THRA-204ENST00000546243 DDX10Q13206 875 aaKnown RBP35.57■■■■□ 3.28
THRA-204ENST00000546243 ATP10BO94823 1461 aa35.54■■■■□ 3.28
THRA-204ENST00000546243 PELP1Q8IZL8 1130 aaKnown RBP35.54■■■■□ 3.28
THRA-204ENST00000546243 CDC42BPAQ5VT25 1732 aa35.53■■■■□ 3.28
THRA-204ENST00000546243 ABCC10Q5T3U5 1492 aa35.52■■■■□ 3.28
THRA-204ENST00000546243 PLEKHD1A6NEE1 506 aa35.51■■■■□ 3.27
THRA-204ENST00000546243 NCOA1Q15788 1441 aa35.5■■■■□ 3.27
THRA-204ENST00000546243 ANKRD30BQ9BXX2 1392 aa35.48■■■■□ 3.27
THRA-204ENST00000546243 RPRD2Q5VT52 1461 aaKnown RBP35.46■■■■□ 3.27
THRA-204ENST00000546243 SHANK2Q9UPX8 1470 aa35.46■■■■□ 3.27
THRA-204ENST00000546243 ABCC2Q92887 1545 aa35.43■■■■□ 3.26
THRA-204ENST00000546243 ANKRD30AQ9BXX3 1397 aa35.41■■■■□ 3.26
THRA-204ENST00000546243 HIRIP3Q9BW71 556 aaPredicted RBP35.39■■■■□ 3.26
THRA-204ENST00000546243 PZPP20742 1482 aa35.38■■■■□ 3.25
THRA-204ENST00000546243 CCER2I3L3R5 266 aa35.38■■■■□ 3.25
THRA-204ENST00000546243 SLC4A1APQ9BWU0 796 aaKnown RBP35.35■■■■□ 3.25
THRA-204ENST00000546243 UHRF1BP1LA0JNW5 1464 aa35.35■■■■□ 3.25
THRA-204ENST00000546243 ANP32CO43423 234 aa35.34■■■■□ 3.25
THRA-204ENST00000546243 TEX14Q8IWB6 1497 aa35.34■■■■□ 3.25
THRA-204ENST00000546243 NPM1P06748 294 aaKnown RBP eCLIP35.34■■■■□ 3.25
THRA-204ENST00000546243 ZNF777Q9ULD5 760 aaPredicted RBP35.33■■■■□ 3.25
THRA-204ENST00000546243 ARHGEF5Q12774 1597 aa35.33■■■■□ 3.25
THRA-204ENST00000546243 L3MBTL2Q969R5 705 aa35.31■■■■□ 3.24
THRA-204ENST00000546243 ZCCHC11Q5TAX3 1644 aaKnown RBP35.31■■■■□ 3.24
THRA-204ENST00000546243 FOXD1Q16676 465 aa35.28■■■■□ 3.24
THRA-204ENST00000546243 C9orf84Q5VXU9 1444 aa35.27■■■■□ 3.24
THRA-204ENST00000546243 ANKRD50Q9ULJ7 1429 aa35.26■■■■□ 3.24
THRA-204ENST00000546243 PREX2Q70Z35 1606 aa35.26■■■■□ 3.24
THRA-204ENST00000546243 EIF4G2P78344 907 aaKnown RBP eCLIP35.26■■■■□ 3.23
THRA-204ENST00000546243 KIAA1107Q9UPP5 1409 aa35.25■■■■□ 3.23
THRA-204ENST00000546243 HSPA5P11021 654 aaKnown RBP35.24■■■■□ 3.23
THRA-204ENST00000546243 KCNH8Q96L42 1107 aa35.24■■■■□ 3.23
THRA-204ENST00000546243 KDM5DQ9BY66 1539 aa35.21■■■■□ 3.23
THRA-204ENST00000546243 TRHP20396 242 aaPredicted RBP35.21■■■■□ 3.23
THRA-204ENST00000546243 CDC42BPBQ9Y5S2 1711 aa35.19■■■■□ 3.22
THRA-204ENST00000546243 ASXL2Q76L83 1435 aa35.16■■■■□ 3.22
THRA-204ENST00000546243 MBD5Q9P267 1494 aa35.15■■■■□ 3.22
THRA-204ENST00000546243 TSPY4P0CV99 314 aa35.15■■■■□ 3.22
THRA-204ENST00000546243 TSPY10P0CW01 314 aa35.15■■■■□ 3.22
THRA-204ENST00000546243 SAMD9LQ8IVG5 1584 aa35.14■■■■□ 3.22
THRA-204ENST00000546243 CCDC141Q6ZP82 1450 aa35.13■■■■□ 3.21
THRA-204ENST00000546243 RSPH4AQ5TD94 716 aa35.12■■■■□ 3.21
THRA-204ENST00000546243 WASHC2AQ641Q2 1341 aa35.11■■■■□ 3.21
THRA-204ENST00000546243 POLR1AO95602 1720 aaPredicted RBP35.1■■■■□ 3.21
THRA-204ENST00000546243 NBPF8Q3BBV2 869 aa35.06■■■■□ 3.2
THRA-204ENST00000546243 MAST1Q9Y2H9 1570 aa35.06■■■■□ 3.2
THRA-204ENST00000546243 KIF15Q9NS87 1388 aa35.06■■■■□ 3.2
THRA-204ENST00000546243 PKD2Q13563 968 aa35.05■■■■□ 3.2
THRA-204ENST00000546243 KIF13AQ9H1H9 1805 aa35.04■■■■□ 3.2
THRA-204ENST00000546243 SPATA31E1Q6ZUB1 1445 aa35.03■■■■□ 3.2
THRA-204ENST00000546243 CNTLNQ9NXG0 1405 aa35.03■■■■□ 3.2
THRA-204ENST00000546243 TTC37Q6PGP7 1564 aa35.02■■■■□ 3.2
THRA-204ENST00000546243 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.02■■■■□ 3.2
THRA-204ENST00000546243 FAM69CQ0P6D2 419 aa35.02■■■■□ 3.2
THRA-204ENST00000546243 NUP155O75694 1391 aa35.01■■■■□ 3.2
THRA-204ENST00000546243 MYO5CQ9NQX4 1742 aa35.01■■■■□ 3.2
THRA-204ENST00000546243 PLEKHH2Q8IVE3 1493 aa34.99■■■■□ 3.19
THRA-204ENST00000546243 HNRNPMP52272 730 aaKnown RBP eCLIP34.99■■■■□ 3.19
THRA-204ENST00000546243 CCDC7Q96M83 1385 aa34.99■■■■□ 3.19
THRA-204ENST00000546243 WDR7Q9Y4E6 1490 aa34.99■■■■□ 3.19
THRA-204ENST00000546243 DIP2BQ9P265 1576 aa34.98■■■■□ 3.19
THRA-204ENST00000546243 ARHGAP5Q13017 1502 aa34.97■■■■□ 3.19
THRA-204ENST00000546243 ARHGEF12Q9NZN5 1544 aa34.97■■■■□ 3.19
THRA-204ENST00000546243 SUPT16HQ9Y5B9 1047 aaKnown RBP34.95■■■■□ 3.19
THRA-204ENST00000546243 SYCP2Q9BX26 1530 aa34.94■■■■□ 3.18
THRA-204ENST00000546243 UHRF1BP1Q6BDS2 1440 aa34.92■■■■□ 3.18
THRA-204ENST00000546243 PLXNC1O60486 1568 aa34.91■■■■□ 3.18
THRA-204ENST00000546243 TSPOAP1O95153 1857 aa34.91■■■■□ 3.18
THRA-204ENST00000546243 UNC13BO14795 1591 aa34.88■■■■□ 3.17
THRA-204ENST00000546243 FAM135AQ9P2D6 1515 aa34.85■■■■□ 3.17
THRA-204ENST00000546243 RALGAPBQ86X10 1494 aa34.83■■■■□ 3.17
THRA-204ENST00000546243 C11orf95C9JLR9 678 aaPredicted RBP34.82■■■■□ 3.16
THRA-204ENST00000546243 KDM5CP41229 1560 aa34.8■■■■□ 3.16
THRA-204ENST00000546243 PLCH2O75038 1416 aa34.78■■■■□ 3.16
THRA-204ENST00000546243 KIF7Q2M1P5 1343 aa34.78■■■■□ 3.16
THRA-204ENST00000546243 USP47Q96K76 1375 aa34.76■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms