RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 CREBRFQ8IUR6 639 aa25.42■■□□□ 1.66
BPTF-208ENST00000544778 CHMP3Q9Y3E7 222 aa25.42■■□□□ 1.66
BPTF-208ENST00000544778 PPP4R2Q9NY27 417 aa25.4■■□□□ 1.66
BPTF-208ENST00000544778 HDGFP51858 240 aaKnown RBP25.39■■□□□ 1.66
BPTF-208ENST00000544778 B4GALNT3Q6L9W6 998 aa25.39■■□□□ 1.65
BPTF-208ENST00000544778 CLIP1P30622 1438 aa25.39■■□□□ 1.65
BPTF-208ENST00000544778 GORABQ5T7V8 394 aa25.38■■□□□ 1.65
BPTF-208ENST00000544778 STK26Q9P289 416 aa25.37■■□□□ 1.65
BPTF-208ENST00000544778 MORC1Q86VD1 984 aa25.36■■□□□ 1.65
BPTF-208ENST00000544778 VPS53Q5VIR6 699 aa25.36■■□□□ 1.65
BPTF-208ENST00000544778 TAF7LQ5H9L4 462 aa25.36■■□□□ 1.65
BPTF-208ENST00000544778 RASSF8Q8NHQ8 419 aa25.34■■□□□ 1.65
BPTF-208ENST00000544778 TMF1P82094 1093 aa25.34■■□□□ 1.65
BPTF-208ENST00000544778 KRI1Q8N9T8 703 aaKnown RBP25.33■■□□□ 1.65
BPTF-208ENST00000544778 TPM4P67936 248 aa25.32■■□□□ 1.64
BPTF-208ENST00000544778 KANK1Q14678 1352 aa25.31■■□□□ 1.64
BPTF-208ENST00000544778 FBXO3Q9UK99 471 aa25.31■■□□□ 1.64
BPTF-208ENST00000544778 DCAF11Q8TEB1 546 aa25.29■■□□□ 1.64
BPTF-208ENST00000544778 DCAF1Q9Y4B6 1507 aa25.29■■□□□ 1.64
BPTF-208ENST00000544778 CFAP44Q96MT7 982 aa25.29■■□□□ 1.64
BPTF-208ENST00000544778 GZF1Q9H116 711 aaPredicted RBP25.28■■□□□ 1.64
BPTF-208ENST00000544778 CEP89Q96ST8 783 aa25.27■■□□□ 1.64
BPTF-208ENST00000544778 GOLGA6L1Q8N7Z2 621 aa25.26■■□□□ 1.63
BPTF-208ENST00000544778 HTATSF1O43719 755 aaKnown RBP25.26■■□□□ 1.63
BPTF-208ENST00000544778 WWC1Q8IX03 1113 aa25.25■■□□□ 1.63
BPTF-208ENST00000544778 TNNT3P45378 269 aaPredicted RBP25.23■■□□□ 1.63
BPTF-208ENST00000544778 MARCH6O60337 910 aa25.22■■□□□ 1.63
BPTF-208ENST00000544778 TRIM6-TRIM34B2RNG4 842 aa25.22■■□□□ 1.63
BPTF-208ENST00000544778 ITPRIPQ8IWB1 547 aa25.22■■□□□ 1.63
BPTF-208ENST00000544778 GPATCH3Q96I76 525 aa25.22■■□□□ 1.63
BPTF-208ENST00000544778 ERCC6Q03468 1493 aa25.21■■□□□ 1.63
BPTF-208ENST00000544778 HDGFL2Q7Z4V5 671 aaPredicted RBP25.21■■□□□ 1.63
BPTF-208ENST00000544778 FRAT2O75474 233 aaPredicted RBP25.2■■□□□ 1.63
BPTF-208ENST00000544778 GBP4Q96PP9 640 aa25.19■■□□□ 1.62
BPTF-208ENST00000544778 IPO8O15397 1037 aaKnown RBP25.19■■□□□ 1.62
BPTF-208ENST00000544778 SIN3AQ96ST3 1273 aa25.19■■□□□ 1.62
BPTF-208ENST00000544778 TOMM22Q9NS69 142 aa25.17■■□□□ 1.62
BPTF-208ENST00000544778 CCDC34Q96HJ3 373 aa25.17■■□□□ 1.62
BPTF-208ENST00000544778 PES1O00541 588 aaKnown RBP25.15■■□□□ 1.62
BPTF-208ENST00000544778 NOL8Q76FK4 1167 aaKnown RBP25.15■■□□□ 1.62
BPTF-208ENST00000544778 SYAP1Q96A49 352 aaPredicted RBP25.15■■□□□ 1.62
BPTF-208ENST00000544778 GGT6Q6P531 493 aa25.13■■□□□ 1.61
BPTF-208ENST00000544778 PTMSP20962 102 aa25.12■■□□□ 1.61
BPTF-208ENST00000544778 GTF2E1P29083 439 aaPredicted RBP25.12■■□□□ 1.61
BPTF-208ENST00000544778 SLKQ9H2G2 1235 aaPredicted RBP25.09■■□□□ 1.61
BPTF-208ENST00000544778 EIF4G1Q04637 1599 aaKnown RBP25.09■■□□□ 1.61
BPTF-208ENST00000544778 SPAG9O60271 1321 aaKnown RBP25.09■■□□□ 1.61
BPTF-208ENST00000544778 U2AF1L5P0DN76 240 aaPredicted RBP25.08■■□□□ 1.61
BPTF-208ENST00000544778 U2AF1Q01081 240 aaKnown RBP eCLIP25.08■■□□□ 1.61
BPTF-208ENST00000544778 CALD1Q05682 793 aaKnown RBP25.08■■□□□ 1.61
BPTF-208ENST00000544778 SLC4A10Q6U841 1118 aa25.08■■□□□ 1.61
BPTF-208ENST00000544778 DEKP35659 375 aaKnown RBP25.08■■□□□ 1.61
BPTF-208ENST00000544778 STK31Q9BXU1 1019 aa25.08■■□□□ 1.6
BPTF-208ENST00000544778 TPM3P06753 285 aa25.06■■□□□ 1.6
BPTF-208ENST00000544778 FOXD4L1Q9NU39 408 aa25.06■■□□□ 1.6
BPTF-208ENST00000544778 CNKSR2Q8WXI2 1034 aa25.06■■□□□ 1.6
BPTF-208ENST00000544778 MFAP1P55081 439 aaKnown RBP25.05■■□□□ 1.6
BPTF-208ENST00000544778 TPD52L1Q16890 204 aaPredicted RBP25.05■■□□□ 1.6
BPTF-208ENST00000544778 CCNB3Q8WWL7 1395 aa25.05■■□□□ 1.6
BPTF-208ENST00000544778 GOLGA3Q08378 1498 aa25.05■■□□□ 1.6
BPTF-208ENST00000544778 RAD21O60216 631 aa25.03■■□□□ 1.6
BPTF-208ENST00000544778 MSH5O43196 834 aa25.03■■□□□ 1.6
BPTF-208ENST00000544778 TCEAL9Q9UHQ7 104 aa25.03■■□□□ 1.6
BPTF-208ENST00000544778 CSPP1Q1MSJ5 1256 aa25.02■■□□□ 1.6
BPTF-208ENST00000544778 PATL2C9JE40 543 aaKnown RBP25.02■■□□□ 1.6
BPTF-208ENST00000544778 RWDD1Q9H446 243 aaPredicted RBP25.01■■□□□ 1.59
BPTF-208ENST00000544778 FOXD4L5Q5VV16 416 aaPredicted RBP25.01■■□□□ 1.59
BPTF-208ENST00000544778 FOXD4L4Q8WXT5 416 aaPredicted RBP25.01■■□□□ 1.59
BPTF-208ENST00000544778 SF3A1Q15459 793 aaKnown RBP25■■□□□ 1.59
BPTF-208ENST00000544778 LTV1Q96GA3 475 aaPredicted RBP24.99■■□□□ 1.59
BPTF-208ENST00000544778 USP35Q9P2H5 1018 aa24.98■■□□□ 1.59
BPTF-208ENST00000544778 KTN1Q86UP2 1357 aaKnown RBP24.97■■□□□ 1.59
BPTF-208ENST00000544778 CEP162Q5TB80 1403 aa24.96■■□□□ 1.59
BPTF-208ENST00000544778 CTDP1Q9Y5B0 961 aaPredicted RBP24.96■■□□□ 1.59
BPTF-208ENST00000544778 TSR1Q2NL82 804 aaKnown RBP24.95■■□□□ 1.58
BPTF-208ENST00000544778 TRIM34Q9BYJ4 488 aa24.95■■□□□ 1.58
BPTF-208ENST00000544778 SMC4Q9NTJ3 1288 aa24.94■■□□□ 1.58
BPTF-208ENST00000544778 KIF16BQ96L93 1317 aa24.93■■□□□ 1.58
BPTF-208ENST00000544778 CCAR2Q8N163 923 aaKnown RBP24.93■■□□□ 1.58
BPTF-208ENST00000544778 H3BQV1 296 aa24.92■■□□□ 1.58
BPTF-208ENST00000544778 IFFO2Q5TF58 517 aa24.92■■□□□ 1.58
BPTF-208ENST00000544778 HMMRO75330 724 aa24.91■■□□□ 1.58
BPTF-208ENST00000544778 SETQ01105 290 aaPredicted RBP24.91■■□□□ 1.58
BPTF-208ENST00000544778 NGDNQ8NEJ9 315 aaKnown RBP24.9■■□□□ 1.58
BPTF-208ENST00000544778 PMFBP1Q8TBY8 1022 aa24.9■■□□□ 1.58
BPTF-208ENST00000544778 AMPHP49418 695 aa24.9■■□□□ 1.58
BPTF-208ENST00000544778 TPM2P07951 284 aa24.89■■□□□ 1.58
BPTF-208ENST00000544778 CHMP4AQ9BY43 222 aa24.89■■□□□ 1.58
BPTF-208ENST00000544778 AKAP17AQ02040 695 aaKnown RBP24.89■■□□□ 1.57
BPTF-208ENST00000544778 GOLGA6L3A6NEY3 463 aa24.88■■□□□ 1.57
BPTF-208ENST00000544778 ROCK2O75116 1388 aaKnown RBP24.88■■□□□ 1.57
BPTF-208ENST00000544778 HDAC5Q9UQL6 1122 aa24.88■■□□□ 1.57
BPTF-208ENST00000544778 NUTM2FA1L443 756 aa24.87■■□□□ 1.57
BPTF-208ENST00000544778 RCAN3Q9UKA8 241 aa24.87■■□□□ 1.57
BPTF-208ENST00000544778 NUTM2DQ5VT03 806 aaPredicted RBP24.87■■□□□ 1.57
BPTF-208ENST00000544778 FBXW7Q969H0 707 aa24.87■■□□□ 1.57
BPTF-208ENST00000544778 CWC22Q9HCG8 908 aaKnown RBP24.86■■□□□ 1.57
BPTF-208ENST00000544778 PHF14O94880 888 aa24.86■■□□□ 1.57
BPTF-208ENST00000544778 EVA1CP58658 441 aa24.85■■□□□ 1.57
BPTF-208ENST00000544778 FOXD1Q16676 465 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms