RNA–Protein interactions for RNA: ENST00000543610.5

CCDC189-206, Transcript of coiled-coil domain containing 189, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC189, Length 1,967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-206ENST00000543610 ROCK1Q13464 1354 aa30.54■■■□□ 2.48
CCDC189-206ENST00000543610 PTPRGP23470 1445 aa30.52■■■□□ 2.48
CCDC189-206ENST00000543610 CFDP1Q9UEE9 299 aaPredicted RBP30.5■■■□□ 2.47
CCDC189-206ENST00000543610 DENND4BO75064 1496 aaPredicted RBP30.49■■■□□ 2.47
CCDC189-206ENST00000543610 CDC42BPAQ5VT25 1732 aa30.48■■■□□ 2.47
CCDC189-206ENST00000543610 PLEKHD1A6NEE1 506 aa30.47■■■□□ 2.47
CCDC189-206ENST00000543610 PPP1R15AO75807 674 aaPredicted RBP30.47■■■□□ 2.47
CCDC189-206ENST00000543610 TONSLQ96HA7 1378 aa30.47■■■□□ 2.47
CCDC189-206ENST00000543610 TRIM52Q96A61 297 aa30.45■■■□□ 2.47
CCDC189-206ENST00000543610 ABCC10Q5T3U5 1492 aa30.44■■■□□ 2.46
CCDC189-206ENST00000543610 ACIN1Q9UKV3 1341 aaKnown RBP30.44■■■□□ 2.46
CCDC189-206ENST00000543610 CROCC2H7BZ55 1655 aa30.44■■■□□ 2.46
CCDC189-206ENST00000543610 ADGBQ8N7X0 1667 aa30.43■■■□□ 2.46
CCDC189-206ENST00000543610 CENPBP07199 599 aaPredicted RBP30.43■■■□□ 2.46
CCDC189-206ENST00000543610 ZNF777Q9ULD5 760 aaPredicted RBP30.39■■■□□ 2.46
CCDC189-206ENST00000543610 ERCC6L2Q5T890 1561 aa30.37■■■□□ 2.45
CCDC189-206ENST00000543610 SCAF1Q9H7N4 1312 aaKnown RBP30.37■■■□□ 2.45
CCDC189-206ENST00000543610 MPHOSPH9Q99550 1183 aa30.36■■■□□ 2.45
CCDC189-206ENST00000543610 ADGRL2O95490 1459 aa30.33■■■□□ 2.45
CCDC189-206ENST00000543610 KDM5BQ9UGL1 1544 aa30.33■■■□□ 2.45
CCDC189-206ENST00000543610 YTHDC1Q96MU7 727 aaKnown RBP30.32■■■□□ 2.44
CCDC189-206ENST00000543610 NCOA1Q15788 1441 aa30.31■■■□□ 2.44
CCDC189-206ENST00000543610 CLASP1Q7Z460 1538 aa30.3■■■□□ 2.44
CCDC189-206ENST00000543610 ABCC2Q92887 1545 aa30.25■■■□□ 2.43
CCDC189-206ENST00000543610 PREX2Q70Z35 1606 aa30.23■■■□□ 2.43
CCDC189-206ENST00000543610 CDC42BPBQ9Y5S2 1711 aa30.23■■■□□ 2.43
CCDC189-206ENST00000543610 SHANK2Q9UPX8 1470 aa30.22■■■□□ 2.43
CCDC189-206ENST00000543610 FOXD1Q16676 465 aa30.22■■■□□ 2.43
CCDC189-206ENST00000543610 ANKRD30AQ9BXX3 1397 aa30.22■■■□□ 2.43
CCDC189-206ENST00000543610 OSCARQ8IYS5 282 aa30.21■■■□□ 2.43
CCDC189-206ENST00000543610 ANKRD30BQ9BXX2 1392 aa30.18■■■□□ 2.42
CCDC189-206ENST00000543610 C9orf84Q5VXU9 1444 aa30.17■■■□□ 2.42
CCDC189-206ENST00000543610 PZPP20742 1482 aa30.17■■■□□ 2.42
CCDC189-206ENST00000543610 HIRIP3Q9BW71 556 aaPredicted RBP30.17■■■□□ 2.42
CCDC189-206ENST00000543610 ARHGEF5Q12774 1597 aa30.16■■■□□ 2.42
CCDC189-206ENST00000543610 SAMD9LQ8IVG5 1584 aa30.16■■■□□ 2.42
CCDC189-206ENST00000543610 SLC4A1APQ9BWU0 796 aaKnown RBP30.16■■■□□ 2.42
CCDC189-206ENST00000543610 TTC37Q6PGP7 1564 aa30.15■■■□□ 2.42
CCDC189-206ENST00000543610 ANKRD50Q9ULJ7 1429 aa30.12■■■□□ 2.41
CCDC189-206ENST00000543610 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.12■■■□□ 2.41
CCDC189-206ENST00000543610 RPRD2Q5VT52 1461 aaKnown RBP30.12■■■□□ 2.41
CCDC189-206ENST00000543610 MBD5Q9P267 1494 aa30.12■■■□□ 2.41
CCDC189-206ENST00000543610 DDX10Q13206 875 aaKnown RBP30.1■■■□□ 2.41
CCDC189-206ENST00000543610 HNRNPMP52272 730 aaKnown RBP eCLIP30.08■■■□□ 2.41
CCDC189-206ENST00000543610 ZCCHC11Q5TAX3 1644 aaKnown RBP30.08■■■□□ 2.41
CCDC189-206ENST00000543610 TSPY4P0CV99 314 aa30.07■■■□□ 2.4
CCDC189-206ENST00000543610 TSPY10P0CW01 314 aa30.07■■■□□ 2.4
CCDC189-206ENST00000543610 MYO5CQ9NQX4 1742 aa30.06■■■□□ 2.4
CCDC189-206ENST00000543610 CCDC141Q6ZP82 1450 aa30.06■■■□□ 2.4
CCDC189-206ENST00000543610 L3MBTL2Q969R5 705 aa30.05■■■□□ 2.4
CCDC189-206ENST00000543610 UHRF1BP1LA0JNW5 1464 aa30.05■■■□□ 2.4
CCDC189-206ENST00000543610 ARHGAP5Q13017 1502 aa30.04■■■□□ 2.4
CCDC189-206ENST00000543610 TEX14Q8IWB6 1497 aa30.04■■■□□ 2.4
CCDC189-206ENST00000543610 SYCP2Q9BX26 1530 aa30.01■■■□□ 2.39
CCDC189-206ENST00000543610 KIAA1107Q9UPP5 1409 aa30.01■■■□□ 2.39
CCDC189-206ENST00000543610 KIF15Q9NS87 1388 aa30■■■□□ 2.39
CCDC189-206ENST00000543610 GTF3C3Q9Y5Q9 886 aa30■■■□□ 2.39
CCDC189-206ENST00000543610 KDM5DQ9BY66 1539 aa29.96■■■□□ 2.39
CCDC189-206ENST00000543610 RSPH4AQ5TD94 716 aa29.95■■■□□ 2.39
CCDC189-206ENST00000543610 PKD2Q13563 968 aa29.94■■■□□ 2.38
CCDC189-206ENST00000543610 KCNH8Q96L42 1107 aa29.94■■■□□ 2.38
CCDC189-206ENST00000543610 MAST1Q9Y2H9 1570 aa29.93■■■□□ 2.38
CCDC189-206ENST00000543610 NUP155O75694 1391 aa29.93■■■□□ 2.38
CCDC189-206ENST00000543610 PLEKHH2Q8IVE3 1493 aa29.89■■■□□ 2.38
CCDC189-206ENST00000543610 HSPA5P11021 654 aaKnown RBP29.88■■■□□ 2.37
CCDC189-206ENST00000543610 NBPF8Q3BBV2 869 aa29.86■■■□□ 2.37
CCDC189-206ENST00000543610 PLCH2O75038 1416 aa29.86■■■□□ 2.37
CCDC189-206ENST00000543610 EIF4G2P78344 907 aaKnown RBP eCLIP29.84■■■□□ 2.37
CCDC189-206ENST00000543610 PLXNC1O60486 1568 aa29.83■■■□□ 2.37
CCDC189-206ENST00000543610 ARHGEF12Q9NZN5 1544 aa29.83■■■□□ 2.37
CCDC189-206ENST00000543610 ABCC1P33527 1531 aa29.78■■■□□ 2.36
CCDC189-206ENST00000543610 FAM135AQ9P2D6 1515 aa29.78■■■□□ 2.36
CCDC189-206ENST00000543610 UNC13BO14795 1591 aa29.77■■■□□ 2.36
CCDC189-206ENST00000543610 WASHC2AQ641Q2 1341 aa29.76■■■□□ 2.35
CCDC189-206ENST00000543610 ANP32CO43423 234 aa29.76■■■□□ 2.35
CCDC189-206ENST00000543610 EFCAB2Q5VUJ9 269 aa29.75■■■□□ 2.35
CCDC189-206ENST00000543610 WDR7Q9Y4E6 1490 aa29.72■■■□□ 2.35
CCDC189-206ENST00000543610 ARAP3Q8WWN8 1544 aa29.71■■■□□ 2.35
CCDC189-206ENST00000543610 DUOX2Q9NRD8 1548 aa29.7■■■□□ 2.34
CCDC189-206ENST00000543610 SPATA31E1Q6ZUB1 1445 aa29.68■■■□□ 2.34
CCDC189-206ENST00000543610 CCER2I3L3R5 266 aa29.68■■■□□ 2.34
CCDC189-206ENST00000543610 TRAPPC8Q9Y2L5 1435 aa29.67■■■□□ 2.34
CCDC189-206ENST00000543610 POLR1AO95602 1720 aaPredicted RBP29.66■■■□□ 2.34
CCDC189-206ENST00000543610 IQGAP3Q86VI3 1631 aa29.65■■■□□ 2.34
CCDC189-206ENST00000543610 ERBINQ96RT1 1412 aa29.63■■■□□ 2.33
CCDC189-206ENST00000543610 ABCA9Q8IUA7 1624 aa29.62■■■□□ 2.33
CCDC189-206ENST00000543610 C11orf95C9JLR9 678 aaPredicted RBP29.62■■■□□ 2.33
CCDC189-206ENST00000543610 UHRF1BP1Q6BDS2 1440 aa29.61■■■□□ 2.33
CCDC189-206ENST00000543610 CCDC7Q96M83 1385 aa29.61■■■□□ 2.33
CCDC189-206ENST00000543610 ZNF326Q5BKZ1 582 aaKnown RBP29.61■■■□□ 2.33
CCDC189-206ENST00000543610 MAGI2Q86UL8 1455 aa29.6■■■□□ 2.33
CCDC189-206ENST00000543610 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.59■■■□□ 2.33
CCDC189-206ENST00000543610 CNTLNQ9NXG0 1405 aa29.59■■■□□ 2.33
CCDC189-206ENST00000543610 RIMBP3CA6NJZ7 1639 aa29.57■■■□□ 2.32
CCDC189-206ENST00000543610 RIMBP3BA6NNM3 1639 aa29.57■■■□□ 2.32
CCDC189-206ENST00000543610 RIMBP3Q9UFD9 1639 aa29.57■■■□□ 2.32
CCDC189-206ENST00000543610 ZFYVE16Q7Z3T8 1539 aa29.56■■■□□ 2.32
CCDC189-206ENST00000543610 ASXL2Q76L83 1435 aa29.56■■■□□ 2.32
CCDC189-206ENST00000543610 RALGAPBQ86X10 1494 aa29.55■■■□□ 2.32
CCDC189-206ENST00000543610 KDM5CP41229 1560 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms