RNA–Protein interactions for RNA: ENST00000542188.5

TRPM1-203, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-203ENST00000542188 MYO15BQ96JP2 1530 aa17.7■□□□□ 0.42
TRPM1-203ENST00000542188 IPO8O15397 1037 aaKnown RBP17.7■□□□□ 0.42
TRPM1-203ENST00000542188 HSP90B1P14625 803 aaKnown RBP17.69■□□□□ 0.42
TRPM1-203ENST00000542188 CCDC70Q6NSX1 233 aa17.69■□□□□ 0.42
TRPM1-203ENST00000542188 ZNF771Q7L3S4 317 aaPredicted RBP17.69■□□□□ 0.42
TRPM1-203ENST00000542188 VSIG10Q8N0Z9 540 aa17.69■□□□□ 0.42
TRPM1-203ENST00000542188 RWDD1Q9H446 243 aaPredicted RBP17.68■□□□□ 0.42
TRPM1-203ENST00000542188 SLKQ9H2G2 1235 aaPredicted RBP17.67■□□□□ 0.42
TRPM1-203ENST00000542188 CC2D1BQ5T0F9 858 aaKnown RBP17.66■□□□□ 0.42
TRPM1-203ENST00000542188 PDE4CQ08493 712 aa17.66■□□□□ 0.42
TRPM1-203ENST00000542188 POGKQ9P215 609 aa17.66■□□□□ 0.42
TRPM1-203ENST00000542188 TEX35Q5T0J7 233 aa17.65■□□□□ 0.42
TRPM1-203ENST00000542188 DDX11L8A8MPP1 907 aa17.64■□□□□ 0.41
TRPM1-203ENST00000542188 RRP12Q5JTH9 1297 aaKnown RBP17.63■□□□□ 0.41
TRPM1-203ENST00000542188 SENP3Q9H4L4 574 aaPredicted RBP17.63■□□□□ 0.41
TRPM1-203ENST00000542188 CCER2I3L3R5 266 aa17.63■□□□□ 0.41
TRPM1-203ENST00000542188 IPO9Q96P70 1041 aaKnown RBP17.63■□□□□ 0.41
TRPM1-203ENST00000542188 PMFBP1Q8TBY8 1022 aa17.62■□□□□ 0.41
TRPM1-203ENST00000542188 RASSF8Q8NHQ8 419 aa17.62■□□□□ 0.41
TRPM1-203ENST00000542188 TSR1Q2NL82 804 aaKnown RBP17.62■□□□□ 0.41
TRPM1-203ENST00000542188 PATL2C9JE40 543 aaKnown RBP17.61■□□□□ 0.41
TRPM1-203ENST00000542188 GPATCH3Q96I76 525 aa17.61■□□□□ 0.41
TRPM1-203ENST00000542188 CLIP1P30622 1438 aa17.61■□□□□ 0.41
TRPM1-203ENST00000542188 TMF1P82094 1093 aa17.6■□□□□ 0.41
TRPM1-203ENST00000542188 NOM1Q5C9Z4 860 aaKnown RBP17.6■□□□□ 0.41
TRPM1-203ENST00000542188 RTF1Q92541 710 aaKnown RBP17.59■□□□□ 0.41
TRPM1-203ENST00000542188 KIF3AQ9Y496 699 aa17.59■□□□□ 0.41
TRPM1-203ENST00000542188 CCDC180Q9P1Z9 1646 aa17.58■□□□□ 0.41
TRPM1-203ENST00000542188 LMOD2Q6P5Q4 547 aa17.57■□□□□ 0.4
TRPM1-203ENST00000542188 TPM2P07951 284 aa17.57■□□□□ 0.4
TRPM1-203ENST00000542188 TPM1P09493 284 aa17.57■□□□□ 0.4
TRPM1-203ENST00000542188 CREBRFQ8IUR6 639 aa17.57■□□□□ 0.4
TRPM1-203ENST00000542188 MFAP1P55081 439 aaKnown RBP17.56■□□□□ 0.4
TRPM1-203ENST00000542188 SKOR2Q2VWA4 1001 aaPredicted RBP17.56■□□□□ 0.4
TRPM1-203ENST00000542188 CCAR2Q8N163 923 aaKnown RBP17.55■□□□□ 0.4
TRPM1-203ENST00000542188 CHMP4AQ9BY43 222 aa17.55■□□□□ 0.4
TRPM1-203ENST00000542188 APBB1O00213 710 aa17.55■□□□□ 0.4
TRPM1-203ENST00000542188 TPD52L1Q16890 204 aaPredicted RBP17.55■□□□□ 0.4
TRPM1-203ENST00000542188 ST18O60284 1047 aa17.53■□□□□ 0.4
TRPM1-203ENST00000542188 ITPRIPQ8IWB1 547 aa17.53■□□□□ 0.4
TRPM1-203ENST00000542188 GOLGA6L19H0YKK7 550 aa17.53■□□□□ 0.4
TRPM1-203ENST00000542188 HDAC5Q9UQL6 1122 aa17.53■□□□□ 0.4
TRPM1-203ENST00000542188 KIF16BQ96L93 1317 aa17.52■□□□□ 0.4
TRPM1-203ENST00000542188 CDR1P51861 262 aa17.52■□□□□ 0.4
TRPM1-203ENST00000542188 MORC1Q86VD1 984 aa17.52■□□□□ 0.4
TRPM1-203ENST00000542188 CHMP4CQ96CF2 233 aa17.52■□□□□ 0.4
TRPM1-203ENST00000542188 PLEKHD1A6NEE1 506 aa17.52■□□□□ 0.39
TRPM1-203ENST00000542188 ABCC9O60706 1549 aa17.52■□□□□ 0.39
TRPM1-203ENST00000542188 SF3A1Q15459 793 aaKnown RBP17.51■□□□□ 0.39
TRPM1-203ENST00000542188 RCAN3Q9UKA8 241 aa17.51■□□□□ 0.39
TRPM1-203ENST00000542188 HMMRO75330 724 aa17.5■□□□□ 0.39
TRPM1-203ENST00000542188 ACBD3Q9H3P7 528 aa17.49■□□□□ 0.39
TRPM1-203ENST00000542188 GORABQ5T7V8 394 aa17.48■□□□□ 0.39
TRPM1-203ENST00000542188 KTN1Q86UP2 1357 aaKnown RBP17.48■□□□□ 0.39
TRPM1-203ENST00000542188 PES1O00541 588 aaKnown RBP17.48■□□□□ 0.39
TRPM1-203ENST00000542188 AK7Q96M32 723 aa17.48■□□□□ 0.39
TRPM1-203ENST00000542188 ATP6V1DQ9Y5K8 247 aa17.48■□□□□ 0.39
TRPM1-203ENST00000542188 TRIM6-TRIM34B2RNG4 842 aa17.47■□□□□ 0.39
TRPM1-203ENST00000542188 BECN2A8MW95 431 aa17.47■□□□□ 0.39
TRPM1-203ENST00000542188 APPP05067 770 aa17.46■□□□□ 0.39
TRPM1-203ENST00000542188 MARCH6O60337 910 aa17.46■□□□□ 0.39
TRPM1-203ENST00000542188 TMX4Q9H1E5 349 aaPredicted RBP17.46■□□□□ 0.39
TRPM1-203ENST00000542188 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.45■□□□□ 0.38
TRPM1-203ENST00000542188 GSE1Q14687 1217 aa17.45■□□□□ 0.38
TRPM1-203ENST00000542188 CHMP7Q8WUX9 453 aaPredicted RBP17.44■□□□□ 0.38
TRPM1-203ENST00000542188 IPO7O95373 1038 aaKnown RBP17.44■□□□□ 0.38
TRPM1-203ENST00000542188 ZCCHC6Q5VYS8 1495 aaKnown RBP17.44■□□□□ 0.38
TRPM1-203ENST00000542188 ARGLU1Q9NWB6 273 aaPredicted RBP17.44■□□□□ 0.38
TRPM1-203ENST00000542188 RUFY1Q96T51 708 aa17.43■□□□□ 0.38
TRPM1-203ENST00000542188 H3BQV1 296 aa17.43■□□□□ 0.38
TRPM1-203ENST00000542188 IFFO2Q5TF58 517 aa17.43■□□□□ 0.38
TRPM1-203ENST00000542188 CFDP1Q9UEE9 299 aaPredicted RBP17.43■□□□□ 0.38
TRPM1-203ENST00000542188 ZNF592Q92610 1267 aa17.43■□□□□ 0.38
TRPM1-203ENST00000542188 FOXD4L1Q9NU39 408 aa17.43■□□□□ 0.38
TRPM1-203ENST00000542188 CCDC191Q8NCU4 936 aa17.42■□□□□ 0.38
TRPM1-203ENST00000542188 KCNH8Q96L42 1107 aa17.42■□□□□ 0.38
TRPM1-203ENST00000542188 TIMELESSQ9UNS1 1208 aa17.42■□□□□ 0.38
TRPM1-203ENST00000542188 DDX49Q9Y6V7 483 aaKnown RBP17.42■□□□□ 0.38
TRPM1-203ENST00000542188 GOLGA3Q08378 1498 aa17.42■□□□□ 0.38
TRPM1-203ENST00000542188 CWC15Q9P013 229 aaKnown RBP17.42■□□□□ 0.38
TRPM1-203ENST00000542188 TSHZ2Q9NRE2 1034 aa17.41■□□□□ 0.38
TRPM1-203ENST00000542188 STK31Q9BXU1 1019 aa17.4■□□□□ 0.38
TRPM1-203ENST00000542188 HDGFP51858 240 aaKnown RBP17.4■□□□□ 0.38
TRPM1-203ENST00000542188 NOL8Q76FK4 1167 aaKnown RBP17.4■□□□□ 0.38
TRPM1-203ENST00000542188 ANKRD20A12PQ8NF67 263 aa17.4■□□□□ 0.38
TRPM1-203ENST00000542188 DCTN1Q14203 1278 aa17.4■□□□□ 0.38
TRPM1-203ENST00000542188 MAP7D2Q96T17 732 aa17.4■□□□□ 0.38
TRPM1-203ENST00000542188 TAF7LQ5H9L4 462 aa17.39■□□□□ 0.37
TRPM1-203ENST00000542188 SRPK2P78362 688 aaKnown RBP17.39■□□□□ 0.37
TRPM1-203ENST00000542188 RDXP35241 583 aaKnown RBP17.38■□□□□ 0.37
TRPM1-203ENST00000542188 MTERF4Q7Z6M4 381 aaKnown RBP17.38■□□□□ 0.37
TRPM1-203ENST00000542188 RALBP1Q15311 655 aa17.38■□□□□ 0.37
TRPM1-203ENST00000542188 VPS53Q5VIR6 699 aa17.38■□□□□ 0.37
TRPM1-203ENST00000542188 HDGFL2Q7Z4V5 671 aaPredicted RBP17.38■□□□□ 0.37
TRPM1-203ENST00000542188 FAM13BQ9NYF5 915 aa17.38■□□□□ 0.37
TRPM1-203ENST00000542188 FAM184AQ8NB25 1140 aa17.37■□□□□ 0.37
TRPM1-203ENST00000542188 CCDC47Q96A33 483 aaKnown RBP17.37■□□□□ 0.37
TRPM1-203ENST00000542188 EEA1Q15075 1411 aa17.37■□□□□ 0.37
TRPM1-203ENST00000542188 HOMER1Q86YM7 354 aa17.36■□□□□ 0.37
TRPM1-203ENST00000542188 KANK1Q14678 1352 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms