RNA–Protein interactions for RNA: ENST00000536876.5

LTBR-206, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-206ENST00000536876 PLCH2O75038 1416 aa29.5■■■□□ 2.31
LTBR-206ENST00000536876 ARHGAP35Q9NRY4 1499 aa29.47■■■□□ 2.31
LTBR-206ENST00000536876 SCAPERQ9BY12 1400 aa29.45■■■□□ 2.31
LTBR-206ENST00000536876 ARHGEF12Q9NZN5 1544 aa29.45■■■□□ 2.31
LTBR-206ENST00000536876 HSPA2P54652 639 aa29.41■■■□□ 2.3
LTBR-206ENST00000536876 KDM5CP41229 1560 aa29.39■■■□□ 2.3
LTBR-206ENST00000536876 FMN1Q68DA7 1419 aa29.38■■■□□ 2.29
LTBR-206ENST00000536876 PREX1Q8TCU6 1659 aa29.37■■■□□ 2.29
LTBR-206ENST00000536876 C9orf84Q5VXU9 1444 aa29.37■■■□□ 2.29
LTBR-206ENST00000536876 ATP10AO60312 1499 aa29.36■■■□□ 2.29
LTBR-206ENST00000536876 CDC42BPBQ9Y5S2 1711 aa29.34■■■□□ 2.29
LTBR-206ENST00000536876 PLPPR3Q6T4P5 718 aa29.34■■■□□ 2.29
LTBR-206ENST00000536876 MLECQ14165 292 aa29.33■■■□□ 2.29
LTBR-206ENST00000536876 DIP2CQ9Y2E4 1556 aa29.32■■■□□ 2.28
LTBR-206ENST00000536876 TROQ12816 1431 aaPredicted RBP29.32■■■□□ 2.28
LTBR-206ENST00000536876 ABCA6Q8N139 1617 aa29.3■■■□□ 2.28
LTBR-206ENST00000536876 ARHGAP5Q13017 1502 aa29.3■■■□□ 2.28
LTBR-206ENST00000536876 ZNF518AQ6AHZ1 1483 aa29.29■■■□□ 2.28
LTBR-206ENST00000536876 EHMT2Q96KQ7 1210 aa29.28■■■□□ 2.28
LTBR-206ENST00000536876 PREX2Q70Z35 1606 aa29.27■■■□□ 2.28
LTBR-206ENST00000536876 REREQ9P2R6 1566 aa29.27■■■□□ 2.28
LTBR-206ENST00000536876 STRCQ7RTU9 1775 aa29.26■■■□□ 2.28
LTBR-206ENST00000536876 EFCAB2Q5VUJ9 269 aa29.25■■■□□ 2.27
LTBR-206ENST00000536876 ITSN2Q9NZM3 1697 aa29.24■■■□□ 2.27
LTBR-206ENST00000536876 ABCC1P33527 1531 aa29.23■■■□□ 2.27
LTBR-206ENST00000536876 UBTFP17480 764 aaKnown RBP29.22■■■□□ 2.27
LTBR-206ENST00000536876 ATP1B4Q9UN42 357 aaPredicted RBP29.21■■■□□ 2.27
LTBR-206ENST00000536876 C3P01024 1663 aa29.21■■■□□ 2.27
LTBR-206ENST00000536876 CDC42BPAQ5VT25 1732 aa29.19■■■□□ 2.26
LTBR-206ENST00000536876 CLIP1P30622 1438 aa29.18■■■□□ 2.26
LTBR-206ENST00000536876 AFAP1Q8N556 730 aa29.17■■■□□ 2.26
LTBR-206ENST00000536876 CEBPAP49715 358 aaPredicted RBP29.16■■■□□ 2.26
LTBR-206ENST00000536876 MLH3Q9UHC1 1453 aa29.16■■■□□ 2.26
LTBR-206ENST00000536876 KIDINS220Q9ULH0 1771 aa29.15■■■□□ 2.26
LTBR-206ENST00000536876 CDK11AQ9UQ88 783 aaPredicted RBP29.14■■■□□ 2.26
LTBR-206ENST00000536876 CERKQ8TCT0 537 aa29.13■■■□□ 2.25
LTBR-206ENST00000536876 TRAPPC8Q9Y2L5 1435 aa29.12■■■□□ 2.25
LTBR-206ENST00000536876 SETD1BQ9UPS6 1966 aaKnown RBP29.12■■■□□ 2.25
LTBR-206ENST00000536876 AGLP35573 1532 aa29.12■■■□□ 2.25
LTBR-206ENST00000536876 CASKIN1Q8WXD9 1431 aa29.1■■■□□ 2.25
LTBR-206ENST00000536876 CCDC18Q5T9S5 1454 aa29.1■■■□□ 2.25
LTBR-206ENST00000536876 CHIC1Q5VXU3 224 aa29.08■■■□□ 2.25
LTBR-206ENST00000536876 UHRF1BP1Q6BDS2 1440 aa29.07■■■□□ 2.24
LTBR-206ENST00000536876 SAMD9LQ8IVG5 1584 aa29.04■■■□□ 2.24
LTBR-206ENST00000536876 FYCO1Q9BQS8 1478 aa28.99■■■□□ 2.23
LTBR-206ENST00000536876 MROH2AA6NES4 1674 aa28.98■■■□□ 2.23
LTBR-206ENST00000536876 SYCP2Q9BX26 1530 aa28.97■■■□□ 2.23
LTBR-206ENST00000536876 MYT1LQ9UL68 1186 aa28.93■■■□□ 2.22
LTBR-206ENST00000536876 LTBP4Q8N2S1 1624 aa28.93■■■□□ 2.22
LTBR-206ENST00000536876 PTPRTO14522 1441 aa28.93■■■□□ 2.22
LTBR-206ENST00000536876 INO80Q9ULG1 1556 aaPredicted RBP28.92■■■□□ 2.22
LTBR-206ENST00000536876 SUPT6HQ7KZ85 1726 aaKnown RBP28.92■■■□□ 2.22
LTBR-206ENST00000536876 PLXNC1O60486 1568 aa28.91■■■□□ 2.22
LTBR-206ENST00000536876 GPATCH8Q9UKJ3 1502 aaKnown RBP28.9■■■□□ 2.22
LTBR-206ENST00000536876 NCOA1Q15788 1441 aa28.89■■■□□ 2.22
LTBR-206ENST00000536876 CNTLNQ9NXG0 1405 aa28.88■■■□□ 2.21
LTBR-206ENST00000536876 ATP7AQ04656 1500 aa28.87■■■□□ 2.21
LTBR-206ENST00000536876 CLTCQ00610 1675 aaKnown RBP28.86■■■□□ 2.21
LTBR-206ENST00000536876 DMRT2Q9Y5R5 561 aa28.85■■■□□ 2.21
LTBR-206ENST00000536876 ZNF142P52746 1687 aaPredicted RBP28.85■■■□□ 2.21
LTBR-206ENST00000536876 MYO3AQ8NEV4 1616 aa28.83■■■□□ 2.21
LTBR-206ENST00000536876 CAMSAP1Q5T5Y3 1602 aa28.83■■■□□ 2.21
LTBR-206ENST00000536876 NPATQ14207 1427 aa28.82■■■□□ 2.2
LTBR-206ENST00000536876 KIAA1107Q9UPP5 1409 aa28.77■■■□□ 2.2
LTBR-206ENST00000536876 TIAM1Q13009 1591 aa28.75■■■□□ 2.19
LTBR-206ENST00000536876 ADGBQ8N7X0 1667 aa28.75■■■□□ 2.19
LTBR-206ENST00000536876 IQSEC2Q5JU85 1478 aa28.75■■■□□ 2.19
LTBR-206ENST00000536876 ESF1Q9H501 851 aaKnown RBP28.75■■■□□ 2.19
LTBR-206ENST00000536876 ZNF777Q9ULD5 760 aaPredicted RBP28.75■■■□□ 2.19
LTBR-206ENST00000536876 A2MP01023 1474 aa28.74■■■□□ 2.19
LTBR-206ENST00000536876 SPAG9O60271 1321 aaKnown RBP28.73■■■□□ 2.19
LTBR-206ENST00000536876 HNRNPMP52272 730 aaKnown RBP eCLIP28.73■■■□□ 2.19
LTBR-206ENST00000536876 SPATA31D1Q6ZQQ2 1576 aa28.73■■■□□ 2.19
LTBR-206ENST00000536876 ZMYM3Q14202 1370 aa28.73■■■□□ 2.19
LTBR-206ENST00000536876 PLEKHH2Q8IVE3 1493 aa28.72■■■□□ 2.19
LTBR-206ENST00000536876 CEP170BQ9Y4F5 1589 aaPredicted RBP28.72■■■□□ 2.19
LTBR-206ENST00000536876 PTPRKQ15262 1439 aa28.69■■■□□ 2.18
LTBR-206ENST00000536876 ILDR2Q71H61 639 aa28.69■■■□□ 2.18
LTBR-206ENST00000536876 DISP3Q9P2K9 1392 aa28.67■■■□□ 2.18
LTBR-206ENST00000536876 PLA2R1Q13018 1463 aa28.66■■■□□ 2.18
LTBR-206ENST00000536876 TCOF1Q13428 1488 aaKnown RBP28.66■■■□□ 2.18
LTBR-206ENST00000536876 CCNB3Q8WWL7 1395 aa28.65■■■□□ 2.18
LTBR-206ENST00000536876 MBD5Q9P267 1494 aa28.65■■■□□ 2.18
LTBR-206ENST00000536876 EHBP1L1Q8N3D4 1523 aa28.64■■■□□ 2.18
LTBR-206ENST00000536876 CFDP1Q9UEE9 299 aaPredicted RBP28.63■■■□□ 2.17
LTBR-206ENST00000536876 NCKAP5LQ9HCH0 1330 aa28.6■■■□□ 2.17
LTBR-206ENST00000536876 MTUS2Q5JR59 1369 aa28.59■■■□□ 2.17
LTBR-206ENST00000536876 ZNF644Q9H582 1327 aaPredicted RBP28.58■■■□□ 2.17
LTBR-206ENST00000536876 DNMT1P26358 1616 aaKnown RBP28.58■■■□□ 2.17
LTBR-206ENST00000536876 ZNF335Q9H4Z2 1342 aaPredicted RBP28.57■■■□□ 2.16
LTBR-206ENST00000536876 POLR1AO95602 1720 aaPredicted RBP28.55■■■□□ 2.16
LTBR-206ENST00000536876 CEP162Q5TB80 1403 aa28.53■■■□□ 2.16
LTBR-206ENST00000536876 NEURL4Q96JN8 1562 aa28.53■■■□□ 2.16
LTBR-206ENST00000536876 A2ML1A8K2U0 1454 aa28.53■■■□□ 2.16
LTBR-206ENST00000536876 RTEL1-TNFRSF6BF6WH68 1400 aa28.52■■■□□ 2.16
LTBR-206ENST00000536876 GGT6Q6P531 493 aa28.51■■■□□ 2.15
LTBR-206ENST00000536876 SOCS7O14512 581 aa28.47■■■□□ 2.15
LTBR-206ENST00000536876 PKD2Q13563 968 aa28.47■■■□□ 2.15
LTBR-206ENST00000536876 CAMSAP2Q08AD1 1489 aa28.46■■■□□ 2.15
LTBR-206ENST00000536876 KDM5DQ9BY66 1539 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms