RNA–Protein interactions for RNA: ENST00000525056.1

ATM-206, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 657 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-206ENST00000525056 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.64□□□□□ -0.71
ATM-206ENST00000525056 POTEFA5A3E0 1075 aa10.63□□□□□ -0.71
ATM-206ENST00000525056 PLCG2P16885 1265 aa10.63□□□□□ -0.71
ATM-206ENST00000525056 FBXO22Q8NEZ5 403 aa10.63□□□□□ -0.71
ATM-206ENST00000525056 CUX2O14529 1486 aa10.62□□□□□ -0.71
ATM-206ENST00000525056 WIZO95785 1651 aa10.61□□□□□ -0.71
ATM-206ENST00000525056 PDCD7Q8N8D1 485 aaKnown RBP10.61□□□□□ -0.71
ATM-206ENST00000525056 KIF21AQ7Z4S6 1674 aa10.6□□□□□ -0.71
ATM-206ENST00000525056 GTPBP6O43824 516 aaPredicted RBP10.6□□□□□ -0.71
ATM-206ENST00000525056 MS4A4AQ96JQ5 239 aa10.6□□□□□ -0.71
ATM-206ENST00000525056 TRIM26Q12899 539 aaPredicted RBP10.59□□□□□ -0.71
ATM-206ENST00000525056 RYDENQ9NUL5 291 aaKnown RBP10.59□□□□□ -0.71
ATM-206ENST00000525056 THOC2Q8NI27 1593 aaKnown RBP10.59□□□□□ -0.71
ATM-206ENST00000525056 DPY19L2Q6NUT2 758 aa10.58□□□□□ -0.72
ATM-206ENST00000525056 SPRYD3Q8NCJ5 442 aa10.57□□□□□ -0.72
ATM-206ENST00000525056 LAMC3Q9Y6N6 1575 aa10.56□□□□□ -0.72
ATM-206ENST00000525056 PAXIP1Q6ZW49 1069 aaPredicted RBP10.56□□□□□ -0.72
ATM-206ENST00000525056 PCGF6Q9BYE7 350 aa10.56□□□□□ -0.72
ATM-206ENST00000525056 CFAP44Q96MT7 982 aa10.54□□□□□ -0.72
ATM-206ENST00000525056 RSF1Q96T23 1441 aaPredicted RBP10.52□□□□□ -0.73
ATM-206ENST00000525056 POTEB2H3BUK9 544 aa10.52□□□□□ -0.73
ATM-206ENST00000525056 PPP1R37O75864 691 aa10.52□□□□□ -0.73
ATM-206ENST00000525056 L3MBTL3Q96JM7 780 aaPredicted RBP10.51□□□□□ -0.73
ATM-206ENST00000525056 BOLA1Q9Y3E2 137 aa10.49□□□□□ -0.73
ATM-206ENST00000525056 POTEJP0CG39 1038 aa10.48□□□□□ -0.73
ATM-206ENST00000525056 PLCB2Q00722 1185 aa10.47□□□□□ -0.73
ATM-206ENST00000525056 G3V3G9 751 aa10.46□□□□□ -0.73
ATM-206ENST00000525056 LHX8Q68G74 356 aa10.45□□□□□ -0.74
ATM-206ENST00000525056 MICALL2Q8IY33 904 aa10.45□□□□□ -0.74
ATM-206ENST00000525056 TMEM121BQ9BXQ6 578 aaPredicted RBP10.45□□□□□ -0.74
ATM-206ENST00000525056 PDS5BQ9NTI5 1447 aa10.44□□□□□ -0.74
ATM-206ENST00000525056 CADPSQ9ULU8 1353 aa10.43□□□□□ -0.74
ATM-206ENST00000525056 PRDM2Q13029 1718 aa10.41□□□□□ -0.74
ATM-206ENST00000525056 MAMSTRQ6ZN01 415 aa10.4□□□□□ -0.74
ATM-206ENST00000525056 WDR62O43379 1518 aa10.39□□□□□ -0.75
ATM-206ENST00000525056 C3orf67Q6ZVT6 689 aa10.39□□□□□ -0.75
ATM-206ENST00000525056 MRC2Q9UBG0 1479 aa10.38□□□□□ -0.75
ATM-206ENST00000525056 SCUBE2Q9NQ36 999 aa10.37□□□□□ -0.75
ATM-206ENST00000525056 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.37□□□□□ -0.75
ATM-206ENST00000525056 TOP2AP11388 1531 aaKnown RBP10.37□□□□□ -0.75
ATM-206ENST00000525056 TSHZ2Q9NRE2 1034 aa10.36□□□□□ -0.75
ATM-206ENST00000525056 OTUD5Q96G74 571 aa10.35□□□□□ -0.75
ATM-206ENST00000525056 FANCD2Q9BXW9 1451 aa10.35□□□□□ -0.75
ATM-206ENST00000525056 CEP164Q9UPV0 1460 aa10.35□□□□□ -0.75
ATM-206ENST00000525056 CADPS2Q86UW7 1296 aa10.33□□□□□ -0.76
ATM-206ENST00000525056 HAP1P54257 671 aaPredicted RBP10.32□□□□□ -0.76
ATM-206ENST00000525056 CFTRP13569 1480 aa10.31□□□□□ -0.76
ATM-206ENST00000525056 TMEM92Q6UXU6 159 aa10.31□□□□□ -0.76
ATM-206ENST00000525056 LOC105371045A0A1W2PR82 267 aa10.3□□□□□ -0.76
ATM-206ENST00000525056 SLAIN1Q8ND83 568 aa10.3□□□□□ -0.76
ATM-206ENST00000525056 EEA1Q15075 1411 aa10.3□□□□□ -0.76
ATM-206ENST00000525056 CCDC88BA6NC98 1476 aa10.29□□□□□ -0.76
ATM-206ENST00000525056 TMC2Q8TDI7 906 aa10.28□□□□□ -0.76
ATM-206ENST00000525056 URB2Q14146 1524 aaKnown RBP10.28□□□□□ -0.76
ATM-206ENST00000525056 C2orf72A6NCS6 295 aa10.27□□□□□ -0.77
ATM-206ENST00000525056 KIF3CO14782 793 aa10.27□□□□□ -0.77
ATM-206ENST00000525056 PDE4AP27815 886 aa10.27□□□□□ -0.77
ATM-206ENST00000525056 CRISPLD2Q9H0B8 497 aa10.27□□□□□ -0.77
ATM-206ENST00000525056 GPHNQ9NQX3 736 aaPredicted RBP10.27□□□□□ -0.77
ATM-206ENST00000525056 NCKAP5LQ9HCH0 1330 aa10.27□□□□□ -0.77
ATM-206ENST00000525056 WRNQ14191 1432 aaPredicted RBP eCLIP10.25□□□□□ -0.77
ATM-206ENST00000525056 LARP6Q9BRS8 491 aaKnown RBP10.24□□□□□ -0.77
ATM-206ENST00000525056 PPARGC1BQ86YN6 1023 aaKnown RBP10.22□□□□□ -0.77
ATM-206ENST00000525056 FOXK1P85037 733 aa10.2□□□□□ -0.78
ATM-206ENST00000525056 DSG2Q14126 1118 aa10.2□□□□□ -0.78
ATM-206ENST00000525056 MFSD10Q14728 455 aa10.19□□□□□ -0.78
ATM-206ENST00000525056 DDX27Q96GQ7 796 aaKnown RBP10.19□□□□□ -0.78
ATM-206ENST00000525056 MYT1Q01538 1121 aa10.18□□□□□ -0.78
ATM-206ENST00000525056 PPP1R15BQ5SWA1 713 aa10.17□□□□□ -0.78
ATM-206ENST00000525056 PLPP6Q8IY26 295 aa10.17□□□□□ -0.78
ATM-206ENST00000525056 VSIG10Q8N0Z9 540 aa10.17□□□□□ -0.78
ATM-206ENST00000525056 ZNF608Q9ULD9 1512 aaPredicted RBP10.17□□□□□ -0.78
ATM-206ENST00000525056 WDR70Q9NW82 654 aa10.16□□□□□ -0.78
ATM-206ENST00000525056 KDM2AQ9Y2K7 1162 aa10.16□□□□□ -0.78
ATM-206ENST00000525056 TOPBP1Q92547 1522 aa10.16□□□□□ -0.78
ATM-206ENST00000525056 SNPHO15079 494 aa10.14□□□□□ -0.79
ATM-206ENST00000525056 EIF4G3O43432 1585 aaKnown RBP10.14□□□□□ -0.79
ATM-206ENST00000525056 DNMBPQ6XZF7 1577 aa10.14□□□□□ -0.79
ATM-206ENST00000525056 CHD1O14646 1710 aa10.13□□□□□ -0.79
ATM-206ENST00000525056 SLC24A1O60721 1099 aa10.12□□□□□ -0.79
ATM-206ENST00000525056 HOXB3P14651 431 aaPredicted RBP10.12□□□□□ -0.79
ATM-206ENST00000525056 TARBP1Q13395 1621 aaKnown RBP10.11□□□□□ -0.79
ATM-206ENST00000525056 IFT140Q96RY7 1462 aa10.11□□□□□ -0.79
ATM-206ENST00000525056 TNIKQ9UKE5 1360 aa10.11□□□□□ -0.79
ATM-206ENST00000525056 DOK7Q18PE1 504 aa10.1□□□□□ -0.79
ATM-206ENST00000525056 RIMBP3CA6NJZ7 1639 aa10.09□□□□□ -0.79
ATM-206ENST00000525056 RIMBP3BA6NNM3 1639 aa10.09□□□□□ -0.79
ATM-206ENST00000525056 RIMBP3Q9UFD9 1639 aa10.09□□□□□ -0.79
ATM-206ENST00000525056 AQRO60306 1485 aaKnown RBP eCLIP10.09□□□□□ -0.79
ATM-206ENST00000525056 SLC34A2O95436 690 aa10.08□□□□□ -0.8
ATM-206ENST00000525056 CENPBP07199 599 aaPredicted RBP10.08□□□□□ -0.8
ATM-206ENST00000525056 E2F4Q16254 413 aa10.08□□□□□ -0.8
ATM-206ENST00000525056 ABCC8Q09428 1581 aa10.08□□□□□ -0.8
ATM-206ENST00000525056 RAD54L2Q9Y4B4 1467 aa10.07□□□□□ -0.8
ATM-206ENST00000525056 CAMK2BQ13554 666 aa10.07□□□□□ -0.8
ATM-206ENST00000525056 POLA1P09884 1462 aaPredicted RBP10.05□□□□□ -0.8
ATM-206ENST00000525056 GOLGA3Q08378 1498 aa10.05□□□□□ -0.8
ATM-206ENST00000525056 RIMBP2O15034 1052 aa10.05□□□□□ -0.8
ATM-206ENST00000525056 ZNF710Q8N1W2 664 aa10.05□□□□□ -0.8
ATM-206ENST00000525056 PTCD2Q8WV60 388 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms