RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 CAMSAP2Q08AD1 1489 aa24.74■■□□□ 1.55
SREK1-212ENST00000522912 KDM6BO15054 1643 aa24.68■■□□□ 1.54
SREK1-212ENST00000522912 UHRF1BP1LA0JNW5 1464 aa24.67■■□□□ 1.54
SREK1-212ENST00000522912 ROCK1Q13464 1354 aa24.66■■□□□ 1.54
SREK1-212ENST00000522912 ZNF777Q9ULD5 760 aaPredicted RBP24.66■■□□□ 1.54
SREK1-212ENST00000522912 ZCCHC11Q5TAX3 1644 aaKnown RBP24.64■■□□□ 1.53
SREK1-212ENST00000522912 ZNF316A6NFI3 1004 aaPredicted RBP24.62■■□□□ 1.53
SREK1-212ENST00000522912 CROCC2H7BZ55 1655 aa24.62■■□□□ 1.53
SREK1-212ENST00000522912 KDM5BQ9UGL1 1544 aa24.61■■□□□ 1.53
SREK1-212ENST00000522912 CDC42BPBQ9Y5S2 1711 aa24.61■■□□□ 1.53
SREK1-212ENST00000522912 SIN3AQ96ST3 1273 aa24.61■■□□□ 1.53
SREK1-212ENST00000522912 PREX2Q70Z35 1606 aa24.59■■□□□ 1.53
SREK1-212ENST00000522912 ADGBQ8N7X0 1667 aa24.59■■□□□ 1.53
SREK1-212ENST00000522912 OSCARQ8IYS5 282 aa24.58■■□□□ 1.53
SREK1-212ENST00000522912 TTC37Q6PGP7 1564 aa24.58■■□□□ 1.53
SREK1-212ENST00000522912 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.57■■□□□ 1.52
SREK1-212ENST00000522912 NEUROD1Q13562 356 aa24.54■■□□□ 1.52
SREK1-212ENST00000522912 ADGRL2O95490 1459 aa24.54■■□□□ 1.52
SREK1-212ENST00000522912 NCOA1Q15788 1441 aa24.53■■□□□ 1.52
SREK1-212ENST00000522912 SAMD9LQ8IVG5 1584 aa24.53■■□□□ 1.52
SREK1-212ENST00000522912 DENND4BO75064 1496 aaPredicted RBP24.51■■□□□ 1.51
SREK1-212ENST00000522912 TRIM52Q96A61 297 aa24.51■■□□□ 1.51
SREK1-212ENST00000522912 MYO5CQ9NQX4 1742 aa24.5■■□□□ 1.51
SREK1-212ENST00000522912 KCNH8Q96L42 1107 aa24.49■■□□□ 1.51
SREK1-212ENST00000522912 ARHGEF5Q12774 1597 aa24.49■■□□□ 1.51
SREK1-212ENST00000522912 SHANK2Q9UPX8 1470 aa24.49■■□□□ 1.51
SREK1-212ENST00000522912 MBD5Q9P267 1494 aa24.48■■□□□ 1.51
SREK1-212ENST00000522912 DIEXFQ68CQ4 756 aaKnown RBP24.48■■□□□ 1.51
SREK1-212ENST00000522912 HNRNPMP52272 730 aaKnown RBP eCLIP24.47■■□□□ 1.513e-7■■■■□ 25
SREK1-212ENST00000522912 ARHGAP5Q13017 1502 aa24.46■■□□□ 1.51
SREK1-212ENST00000522912 ANKRD30AQ9BXX3 1397 aa24.45■■□□□ 1.5
SREK1-212ENST00000522912 C9orf84Q5VXU9 1444 aa24.45■■□□□ 1.5
SREK1-212ENST00000522912 TIMELESSQ9UNS1 1208 aa24.45■■□□□ 1.5
SREK1-212ENST00000522912 ACIN1Q9UKV3 1341 aaKnown RBP24.43■■□□□ 1.5
SREK1-212ENST00000522912 MPHOSPH9Q99550 1183 aa24.43■■□□□ 1.5
SREK1-212ENST00000522912 CCDC141Q6ZP82 1450 aa24.4■■□□□ 1.5
SREK1-212ENST00000522912 SYCP2Q9BX26 1530 aa24.39■■□□□ 1.5
SREK1-212ENST00000522912 TSPY4P0CV99 314 aa24.39■■□□□ 1.5
SREK1-212ENST00000522912 TSPY10P0CW01 314 aa24.39■■□□□ 1.5
SREK1-212ENST00000522912 PLCH2O75038 1416 aa24.39■■□□□ 1.49
SREK1-212ENST00000522912 WDR7Q9Y4E6 1490 aa24.37■■□□□ 1.49
SREK1-212ENST00000522912 RSPH4AQ5TD94 716 aa24.35■■□□□ 1.49
SREK1-212ENST00000522912 ANKRD50Q9ULJ7 1429 aa24.35■■□□□ 1.49
SREK1-212ENST00000522912 PPP1R15AO75807 674 aaPredicted RBP24.35■■□□□ 1.49
SREK1-212ENST00000522912 KIAA1107Q9UPP5 1409 aa24.34■■□□□ 1.49
SREK1-212ENST00000522912 TONSLQ96HA7 1378 aa24.33■■□□□ 1.49
SREK1-212ENST00000522912 PZPP20742 1482 aa24.33■■□□□ 1.49
SREK1-212ENST00000522912 PLEKHH2Q8IVE3 1493 aa24.33■■□□□ 1.49
SREK1-212ENST00000522912 FOXD1Q16676 465 aa24.32■■□□□ 1.48
SREK1-212ENST00000522912 ARHGEF12Q9NZN5 1544 aa24.32■■□□□ 1.48
SREK1-212ENST00000522912 MAST1Q9Y2H9 1570 aa24.31■■□□□ 1.48
SREK1-212ENST00000522912 KIF15Q9NS87 1388 aa24.31■■□□□ 1.48
SREK1-212ENST00000522912 EFCAB2Q5VUJ9 269 aa24.3■■□□□ 1.48
SREK1-212ENST00000522912 SLC4A1APQ9BWU0 796 aaKnown RBP24.3■■□□□ 1.48
SREK1-212ENST00000522912 ASXL2Q76L83 1435 aa24.29■■□□□ 1.48
SREK1-212ENST00000522912 ARAP3Q8WWN8 1544 aa24.28■■□□□ 1.48
SREK1-212ENST00000522912 ANKRD30BQ9BXX2 1392 aa24.28■■□□□ 1.48
SREK1-212ENST00000522912 ABCC1P33527 1531 aa24.27■■□□□ 1.48
SREK1-212ENST00000522912 ABCA9Q8IUA7 1624 aa24.27■■□□□ 1.48
SREK1-212ENST00000522912 PLXNC1O60486 1568 aa24.22■■□□□ 1.47
SREK1-212ENST00000522912 KDM5DQ9BY66 1539 aa24.2■■□□□ 1.47
SREK1-212ENST00000522912 NPM1P06748 294 aaKnown RBP eCLIP24.2■■□□□ 1.46
SREK1-212ENST00000522912 TRAPPC8Q9Y2L5 1435 aa24.19■■□□□ 1.46
SREK1-212ENST00000522912 NUP155O75694 1391 aa24.19■■□□□ 1.46
SREK1-212ENST00000522912 RPRD2Q5VT52 1461 aaKnown RBP24.18■■□□□ 1.46
SREK1-212ENST00000522912 PKD2Q13563 968 aa24.16■■□□□ 1.46
SREK1-212ENST00000522912 FANCAO15360 1455 aa24.15■■□□□ 1.46
SREK1-212ENST00000522912 DUOX2Q9NRD8 1548 aa24.11■■□□□ 1.45
SREK1-212ENST00000522912 L3MBTL2Q969R5 705 aa24.11■■□□□ 1.45
SREK1-212ENST00000522912 UNC13BO14795 1591 aa24.1■■□□□ 1.45
SREK1-212ENST00000522912 AFAP1Q8N556 730 aa24.09■■□□□ 1.45
SREK1-212ENST00000522912 TEX14Q8IWB6 1497 aa24.09■■□□□ 1.45
SREK1-212ENST00000522912 MIER1Q8N108 512 aa24.08■■□□□ 1.44
SREK1-212ENST00000522912 FAM135AQ9P2D6 1515 aa24.07■■□□□ 1.44
SREK1-212ENST00000522912 SPAG9O60271 1321 aaKnown RBP24.07■■□□□ 1.44
SREK1-212ENST00000522912 ZFYVE16Q7Z3T8 1539 aa24.06■■□□□ 1.44
SREK1-212ENST00000522912 RTEL1-TNFRSF6BF6WH68 1400 aa24.06■■□□□ 1.44
SREK1-212ENST00000522912 ADGRL1O94910 1474 aa24.05■■□□□ 1.44
SREK1-212ENST00000522912 ERBINQ96RT1 1412 aa24.05■■□□□ 1.44
SREK1-212ENST00000522912 RIMBP3CA6NJZ7 1639 aa24.05■■□□□ 1.44
SREK1-212ENST00000522912 RIMBP3BA6NNM3 1639 aa24.05■■□□□ 1.44
SREK1-212ENST00000522912 RIMBP3Q9UFD9 1639 aa24.05■■□□□ 1.44
SREK1-212ENST00000522912 SCAPERQ9BY12 1400 aa24.04■■□□□ 1.44
SREK1-212ENST00000522912 INO80Q9ULG1 1556 aaPredicted RBP24.02■■□□□ 1.44
SREK1-212ENST00000522912 HIRIP3Q9BW71 556 aaPredicted RBP24.01■■□□□ 1.43
SREK1-212ENST00000522912 CD109Q6YHK3 1445 aa24.01■■□□□ 1.43
SREK1-212ENST00000522912 IQGAP3Q86VI3 1631 aa24.01■■□□□ 1.43
SREK1-212ENST00000522912 CYB5RLQ6IPT4 315 aa24■■□□□ 1.43
SREK1-212ENST00000522912 MAGI2Q86UL8 1455 aa24■■□□□ 1.43
SREK1-212ENST00000522912 ATP7AQ04656 1500 aa23.99■■□□□ 1.43
SREK1-212ENST00000522912 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.99■■□□□ 1.433e-7■■□□□ 13.6
SREK1-212ENST00000522912 NBPF8Q3BBV2 869 aa23.96■■□□□ 1.43
SREK1-212ENST00000522912 CFAP74Q9C0B2 1584 aa23.96■■□□□ 1.43
SREK1-212ENST00000522912 KIDINS220Q9ULH0 1771 aa23.91■■□□□ 1.42
SREK1-212ENST00000522912 ZNF518AQ6AHZ1 1483 aa23.89■■□□□ 1.42
SREK1-212ENST00000522912 PLA2R1Q13018 1463 aa23.89■■□□□ 1.41
SREK1-212ENST00000522912 DEPDC5O75140 1603 aa23.89■■□□□ 1.41
SREK1-212ENST00000522912 HSPA5P11021 654 aaKnown RBP23.87■■□□□ 1.41
SREK1-212ENST00000522912 DDX10Q13206 875 aaKnown RBP23.87■■□□□ 1.41
SREK1-212ENST00000522912 MYT1LQ9UL68 1186 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms