RNA–Protein interactions for RNA: ENST00000520539.5

UBR5-207, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBR5, Length 10,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-207ENST00000520539 ZRSR2Q15696 482 aaKnown RBP19.31■□□□□ 0.68
UBR5-207ENST00000520539 IPO7O95373 1038 aaKnown RBP19.31■□□□□ 0.68
UBR5-207ENST00000520539 MIER1Q8N108 512 aa19.31■□□□□ 0.68
UBR5-207ENST00000520539 USP8P40818 1118 aa19.3■□□□□ 0.68
UBR5-207ENST00000520539 PODXL2Q9NZ53 605 aa19.3■□□□□ 0.68
UBR5-207ENST00000520539 NCBP3Q53F19 620 aaKnown RBP19.29■□□□□ 0.68
UBR5-207ENST00000520539 NUDCQ9Y266 331 aa19.29■□□□□ 0.68
UBR5-207ENST00000520539 H0YHG0 523 aa19.29■□□□□ 0.68
UBR5-207ENST00000520539 SUPT16HQ9Y5B9 1047 aaKnown RBP19.28■□□□□ 0.68
UBR5-207ENST00000520539 GPATCH3Q96I76 525 aa19.28■□□□□ 0.68
UBR5-207ENST00000520539 MYO6Q9UM54 1294 aa19.27■□□□□ 0.68
UBR5-207ENST00000520539 PATL2C9JE40 543 aaKnown RBP19.27■□□□□ 0.68
UBR5-207ENST00000520539 GOLGA6L7A0A1B0GV03 622 aa19.27■□□□□ 0.68
UBR5-207ENST00000520539 DYDC1Q8WWB3 177 aa19.25■□□□□ 0.67
UBR5-207ENST00000520539 CHMP4AQ9BY43 222 aa19.25■□□□□ 0.67
UBR5-207ENST00000520539 IPO9Q96P70 1041 aaKnown RBP19.24■□□□□ 0.67
UBR5-207ENST00000520539 RBM19Q9Y4C8 960 aaKnown RBP19.24■□□□□ 0.67
UBR5-207ENST00000520539 GOLGA6L19H0YKK7 550 aa19.22■□□□□ 0.67
UBR5-207ENST00000520539 TSPYL1Q9H0U9 437 aa19.22■□□□□ 0.67
UBR5-207ENST00000520539 ERCC4Q92889 916 aaPredicted RBP19.22■□□□□ 0.67
UBR5-207ENST00000520539 GZF1Q9H116 711 aaPredicted RBP19.21■□□□□ 0.67
UBR5-207ENST00000520539 IPO8O15397 1037 aaKnown RBP19.21■□□□□ 0.67
UBR5-207ENST00000520539 ST18O60284 1047 aa19.2■□□□□ 0.66
UBR5-207ENST00000520539 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.2■□□□□ 0.66
UBR5-207ENST00000520539 MEX3CQ5U5Q3 659 aaKnown RBP19.2■□□□□ 0.66
UBR5-207ENST00000520539 ANKRD20A12PQ8NF67 263 aa19.2■□□□□ 0.66
UBR5-207ENST00000520539 ZNF777Q9ULD5 760 aaPredicted RBP19.2■□□□□ 0.66
UBR5-207ENST00000520539 PES1O00541 588 aaKnown RBP19.18■□□□□ 0.66
UBR5-207ENST00000520539 HDAC5Q9UQL6 1122 aa19.18■□□□□ 0.66
UBR5-207ENST00000520539 NPHP1O15259 732 aa19.17■□□□□ 0.66
UBR5-207ENST00000520539 CCAR2Q8N163 923 aaKnown RBP19.16■□□□□ 0.66
UBR5-207ENST00000520539 HOOK1Q9UJC3 728 aaKnown RBP19.16■□□□□ 0.66
UBR5-207ENST00000520539 LEKR1Q6ZMV7 388 aa19.15■□□□□ 0.66
UBR5-207ENST00000520539 CHGAP10645 457 aaKnown RBP19.15■□□□□ 0.66
UBR5-207ENST00000520539 DIAPH3Q9NSV4 1193 aa19.15■□□□□ 0.66
UBR5-207ENST00000520539 TAF7LQ5H9L4 462 aa19.15■□□□□ 0.66
UBR5-207ENST00000520539 GSE1Q14687 1217 aa19.14■□□□□ 0.65
UBR5-207ENST00000520539 RASSF8Q8NHQ8 419 aa19.14■□□□□ 0.65
UBR5-207ENST00000520539 DEF6Q9H4E7 631 aa19.13■□□□□ 0.65
UBR5-207ENST00000520539 DHX8Q14562 1220 aaKnown RBP19.12■□□□□ 0.65
UBR5-207ENST00000520539 RWDD1Q9H446 243 aaPredicted RBP19.12■□□□□ 0.65
UBR5-207ENST00000520539 CCP110O43303 1012 aa19.12■□□□□ 0.65
UBR5-207ENST00000520539 HMGN5P82970 282 aaKnown RBP19.11■□□□□ 0.65
UBR5-207ENST00000520539 FRAT1Q92837 279 aaPredicted RBP19.11■□□□□ 0.65
UBR5-207ENST00000520539 TPD52L1Q16890 204 aaPredicted RBP19.11■□□□□ 0.65
UBR5-207ENST00000520539 RSF1Q96T23 1441 aaPredicted RBP19.1■□□□□ 0.65
UBR5-207ENST00000520539 FAM43AQ8N2R8 423 aa19.1■□□□□ 0.65
UBR5-207ENST00000520539 A0A0G2JS52 829 aa19.09■□□□□ 0.65
UBR5-207ENST00000520539 CSRNP3Q8WYN3 585 aa19.09■□□□□ 0.65
UBR5-207ENST00000520539 CCDC173Q0VFZ6 552 aa19.09■□□□□ 0.65
UBR5-207ENST00000520539 FAM13BQ9NYF5 915 aa19.09■□□□□ 0.65
UBR5-207ENST00000520539 BECN2A8MW95 431 aa19.09■□□□□ 0.65
UBR5-207ENST00000520539 KIAA0754O94854 1291 aa19.08■□□□□ 0.65
UBR5-207ENST00000520539 EEA1Q15075 1411 aa19.08■□□□□ 0.64
UBR5-207ENST00000520539 SLKQ9H2G2 1235 aaPredicted RBP19.08■□□□□ 0.64
UBR5-207ENST00000520539 ZBTB7CA1YPR0 619 aa19.07■□□□□ 0.64
UBR5-207ENST00000520539 PMFBP1Q8TBY8 1022 aa19.06■□□□□ 0.64
UBR5-207ENST00000520539 TAOK2Q9UL54 1235 aa19.06■□□□□ 0.64
UBR5-207ENST00000520539 MTUS2Q5JR59 1369 aa19.05■□□□□ 0.64
UBR5-207ENST00000520539 CCER2I3L3R5 266 aa19.05■□□□□ 0.64
UBR5-207ENST00000520539 PHLDB1Q86UU1 1377 aa19.04■□□□□ 0.64
UBR5-207ENST00000520539 SPRYD3Q8NCJ5 442 aa19.03■□□□□ 0.64
UBR5-207ENST00000520539 MNS1Q8NEH6 495 aa19.02■□□□□ 0.64
UBR5-207ENST00000520539 CAVIN1Q6NZI2 390 aaKnown RBP19.02■□□□□ 0.64
UBR5-207ENST00000520539 HOMER1Q86YM7 354 aa19.02■□□□□ 0.64
UBR5-207ENST00000520539 HSP90AB3PQ58FF7 597 aa19.02■□□□□ 0.63
UBR5-207ENST00000520539 TSPY4P0CV99 314 aa19.02■□□□□ 0.63
UBR5-207ENST00000520539 TSPY10P0CW01 314 aa19.02■□□□□ 0.63
UBR5-207ENST00000520539 B4GALNT3Q6L9W6 998 aa19.01■□□□□ 0.63
UBR5-207ENST00000520539 HMGB1P09429 215 aaKnown RBP19.01■□□□□ 0.63
UBR5-207ENST00000520539 ANKRD18AQ8IVF6 992 aa19■□□□□ 0.63
UBR5-207ENST00000520539 GOLGA6L10A6NI86 522 aa19■□□□□ 0.63
UBR5-207ENST00000520539 NAT10Q9H0A0 1025 aaKnown RBP19■□□□□ 0.63
UBR5-207ENST00000520539 ISY1Q9ULR0 285 aaKnown RBP18.99■□□□□ 0.63
UBR5-207ENST00000520539 RRP9O43818 475 aaKnown RBP18.99■□□□□ 0.63
UBR5-207ENST00000520539 PPP1R15AO75807 674 aaPredicted RBP18.99■□□□□ 0.63
UBR5-207ENST00000520539 CCDC39Q9UFE4 941 aa18.98■□□□□ 0.63
UBR5-207ENST00000520539 EZRP15311 586 aaKnown RBP18.98■□□□□ 0.63
UBR5-207ENST00000520539 C14orf37Q86TY3 774 aa18.98■□□□□ 0.63
UBR5-207ENST00000520539 SF3A1Q15459 793 aaKnown RBP18.96■□□□□ 0.63
UBR5-207ENST00000520539 ZNF592Q92610 1267 aa18.95■□□□□ 0.62
UBR5-207ENST00000520539 SPATA24Q86W54 205 aa18.95■□□□□ 0.62
UBR5-207ENST00000520539 KAT6BQ8WYB5 2073 aa18.94■□□□□ 0.62
UBR5-207ENST00000520539 PDE4CQ08493 712 aa18.94■□□□□ 0.62
UBR5-207ENST00000520539 FBLN2P98095 1184 aa18.93■□□□□ 0.62
UBR5-207ENST00000520539 H3BQV1 296 aa18.93■□□□□ 0.62
UBR5-207ENST00000520539 RABEP1Q15276 862 aa18.93■□□□□ 0.62
UBR5-207ENST00000520539 IFFO2Q5TF58 517 aa18.93■□□□□ 0.62
UBR5-207ENST00000520539 CCDC47Q96A33 483 aaKnown RBP18.93■□□□□ 0.62
UBR5-207ENST00000520539 TXLNBQ8N3L3 684 aa18.93■□□□□ 0.62
UBR5-207ENST00000520539 KTN1Q86UP2 1357 aaKnown RBP18.93■□□□□ 0.62
UBR5-207ENST00000520539 KDM2AQ9Y2K7 1162 aa18.92■□□□□ 0.62
UBR5-207ENST00000520539 ERLIN2O94905 339 aa18.92■□□□□ 0.62
UBR5-207ENST00000520539 DDX11Q96FC9 970 aa18.92■□□□□ 0.62
UBR5-207ENST00000520539 IQCEQ6IPM2 695 aa18.92■□□□□ 0.62
UBR5-207ENST00000520539 EIF3JO75822 258 aaKnown RBP18.91■□□□□ 0.62
UBR5-207ENST00000520539 CREBRFQ8IUR6 639 aa18.91■□□□□ 0.62
UBR5-207ENST00000520539 FAM107BQ9H098 131 aa18.91■□□□□ 0.62
UBR5-207ENST00000520539 GIMAP7Q8NHV1 300 aa18.91■□□□□ 0.62
UBR5-207ENST00000520539 DDX49Q9Y6V7 483 aaKnown RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms