RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 DAXXQ9UER7 740 aaPredicted RBP6.77□□□□□ -1.33
RNU6-840P-201ENST00000517275 NEUROD2Q15784 382 aa6.75□□□□□ -1.33
RNU6-840P-201ENST00000517275 BMP2KQ9NSY1 1161 aaPredicted RBP6.75□□□□□ -1.33
RNU6-840P-201ENST00000517275 FOXK1P85037 733 aa6.74□□□□□ -1.33
RNU6-840P-201ENST00000517275 GPIHBP1Q8IV16 184 aa6.74□□□□□ -1.33
RNU6-840P-201ENST00000517275 ARXQ96QS3 562 aa6.74□□□□□ -1.33
RNU6-840P-201ENST00000517275 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.74□□□□□ -1.33
RNU6-840P-201ENST00000517275 MICALL2Q8IY33 904 aa6.73□□□□□ -1.33
RNU6-840P-201ENST00000517275 AK7Q96M32 723 aa6.73□□□□□ -1.33
RNU6-840P-201ENST00000517275 TMEM121BQ9BXQ6 578 aaPredicted RBP6.73□□□□□ -1.33
RNU6-840P-201ENST00000517275 EMILIN3Q9NT22 766 aa6.73□□□□□ -1.33
RNU6-840P-201ENST00000517275 GPR37O15354 613 aa6.72□□□□□ -1.33
RNU6-840P-201ENST00000517275 MLLT3P42568 568 aaPredicted RBP6.72□□□□□ -1.33
RNU6-840P-201ENST00000517275 PDCD7Q8N8D1 485 aaKnown RBP6.72□□□□□ -1.33
RNU6-840P-201ENST00000517275 TRIM35Q9UPQ4 493 aa6.72□□□□□ -1.33
RNU6-840P-201ENST00000517275 KIF3CO14782 793 aa6.71□□□□□ -1.34
RNU6-840P-201ENST00000517275 DSG2Q14126 1118 aa6.71□□□□□ -1.34
RNU6-840P-201ENST00000517275 IER5LQ5T953 404 aa6.71□□□□□ -1.34
RNU6-840P-201ENST00000517275 C14orf37Q86TY3 774 aa6.7□□□□□ -1.34
RNU6-840P-201ENST00000517275 DPYSL4O14531 572 aa6.69□□□□□ -1.34
RNU6-840P-201ENST00000517275 IRX5P78411 483 aaPredicted RBP6.69□□□□□ -1.34
RNU6-840P-201ENST00000517275 RBM26Q5T8P6 1007 aaKnown RBP6.69□□□□□ -1.34
RNU6-840P-201ENST00000517275 TMC2Q8TDI7 906 aa6.67□□□□□ -1.34
RNU6-840P-201ENST00000517275 GALR2O43603 387 aaPredicted RBP6.66□□□□□ -1.34
RNU6-840P-201ENST00000517275 ASTLQ6HA08 431 aaPredicted RBP6.66□□□□□ -1.34
RNU6-840P-201ENST00000517275 TRIM66O15016 1216 aa6.65□□□□□ -1.34
RNU6-840P-201ENST00000517275 PTGER2P43116 358 aa6.65□□□□□ -1.34
RNU6-840P-201ENST00000517275 DPY19L2Q6NUT2 758 aa6.65□□□□□ -1.34
RNU6-840P-201ENST00000517275 PLPP6Q8IY26 295 aa6.64□□□□□ -1.35
RNU6-840P-201ENST00000517275 OCEL1Q9H607 264 aa6.64□□□□□ -1.35
RNU6-840P-201ENST00000517275 BOLA1Q9Y3E2 137 aa6.64□□□□□ -1.35
RNU6-840P-201ENST00000517275 C2orf72A6NCS6 295 aa6.63□□□□□ -1.35
RNU6-840P-201ENST00000517275 PDE4DQ08499 809 aa6.63□□□□□ -1.35
RNU6-840P-201ENST00000517275 MAP2K5Q13163 448 aa6.63□□□□□ -1.35
RNU6-840P-201ENST00000517275 KDM4CQ9H3R0 1056 aa6.63□□□□□ -1.35
RNU6-840P-201ENST00000517275 MINK1Q8N4C8 1332 aaPredicted RBP6.62□□□□□ -1.35
RNU6-840P-201ENST00000517275 ATMINO43313 823 aaPredicted RBP6.62□□□□□ -1.35
RNU6-840P-201ENST00000517275 ATN1P54259 1190 aaPredicted RBP6.62□□□□□ -1.35
RNU6-840P-201ENST00000517275 AMHR2Q16671 573 aa6.62□□□□□ -1.35
RNU6-840P-201ENST00000517275 GPBP1L1Q9HC44 474 aaPredicted RBP6.62□□□□□ -1.35
RNU6-840P-201ENST00000517275 OXER1Q8TDS5 423 aa6.61□□□□□ -1.35
RNU6-840P-201ENST00000517275 KRI1Q8N9T8 703 aaKnown RBP6.6□□□□□ -1.35
RNU6-840P-201ENST00000517275 OSBPP22059 807 aa6.59□□□□□ -1.35
RNU6-840P-201ENST00000517275 HIC1Q14526 733 aa6.59□□□□□ -1.35
RNU6-840P-201ENST00000517275 L3MBTL3Q96JM7 780 aaPredicted RBP6.58□□□□□ -1.36
RNU6-840P-201ENST00000517275 GNPATO15228 680 aa6.57□□□□□ -1.36
RNU6-840P-201ENST00000517275 HOMEZQ8IX15 550 aa6.57□□□□□ -1.36
RNU6-840P-201ENST00000517275 CCDC102AQ96A19 550 aa6.57□□□□□ -1.36
RNU6-840P-201ENST00000517275 DDRGK1Q96HY6 314 aa6.57□□□□□ -1.36
RNU6-840P-201ENST00000517275 G3V3G9 751 aa6.56□□□□□ -1.36
RNU6-840P-201ENST00000517275 IRF6O14896 467 aa6.56□□□□□ -1.36
RNU6-840P-201ENST00000517275 FCHSD2O94868 740 aa6.56□□□□□ -1.36
RNU6-840P-201ENST00000517275 PLCG2P16885 1265 aa6.56□□□□□ -1.36
RNU6-840P-201ENST00000517275 MAP3K9P80192 1104 aa6.56□□□□□ -1.36
RNU6-840P-201ENST00000517275 TMEM92Q6UXU6 159 aa6.56□□□□□ -1.36
RNU6-840P-201ENST00000517275 GOPCQ9HD26 462 aa6.56□□□□□ -1.36
RNU6-840P-201ENST00000517275 SLC34A2O95436 690 aa6.55□□□□□ -1.36
RNU6-840P-201ENST00000517275 PTCD2Q8WV60 388 aaKnown RBP6.55□□□□□ -1.36
RNU6-840P-201ENST00000517275 PARP9Q8IXQ6 854 aa6.54□□□□□ -1.36
RNU6-840P-201ENST00000517275 PLEKHG3A1L390 1219 aa6.53□□□□□ -1.36
RNU6-840P-201ENST00000517275 PTGDRQ13258 359 aa6.53□□□□□ -1.36
RNU6-840P-201ENST00000517275 ZNF316A6NFI3 1004 aaPredicted RBP6.52□□□□□ -1.37
RNU6-840P-201ENST00000517275 GRXCR2A6NFK2 248 aa6.52□□□□□ -1.37
RNU6-840P-201ENST00000517275 TBC1D12O60347 775 aa6.52□□□□□ -1.37
RNU6-840P-201ENST00000517275 IL27Q8NEV9 243 aa6.52□□□□□ -1.37
RNU6-840P-201ENST00000517275 FAM117AQ9C073 453 aa6.52□□□□□ -1.37
RNU6-840P-201ENST00000517275 ANO8Q9HCE9 1232 aaPredicted RBP6.52□□□□□ -1.37
RNU6-840P-201ENST00000517275 NUTM2FA1L443 756 aa6.51□□□□□ -1.37
RNU6-840P-201ENST00000517275 EVX2Q03828 476 aa6.51□□□□□ -1.37
RNU6-840P-201ENST00000517275 HAX1O00165 279 aa6.5□□□□□ -1.37
RNU6-840P-201ENST00000517275 EVI5O60447 810 aa6.5□□□□□ -1.37
RNU6-840P-201ENST00000517275 UPF1Q92900 1129 aaKnown RBP eCLIP6.5□□□□□ -1.37
RNU6-840P-201ENST00000517275 PRIM1P49642 420 aaKnown RBP6.49□□□□□ -1.37
RNU6-840P-201ENST00000517275 EN1Q05925 392 aaPredicted RBP6.49□□□□□ -1.37
RNU6-840P-201ENST00000517275 SLC39A7Q92504 469 aa6.49□□□□□ -1.37
RNU6-840P-201ENST00000517275 EPAS1Q99814 870 aa6.49□□□□□ -1.37
RNU6-840P-201ENST00000517275 TMUB1Q9BVT8 246 aa6.49□□□□□ -1.37
RNU6-840P-201ENST00000517275 ZMYND15Q9H091 742 aa6.49□□□□□ -1.37
RNU6-840P-201ENST00000517275 ONECUT3O60422 494 aaPredicted RBP6.48□□□□□ -1.37
RNU6-840P-201ENST00000517275 PHF14O94880 888 aa6.48□□□□□ -1.37
RNU6-840P-201ENST00000517275 DDX12PQ92771 950 aa6.48□□□□□ -1.37
RNU6-840P-201ENST00000517275 RSPH6AQ9H0K4 717 aa6.48□□□□□ -1.37
RNU6-840P-201ENST00000517275 COLQQ9Y215 455 aaPredicted RBP6.48□□□□□ -1.37
RNU6-840P-201ENST00000517275 FECHP22830 423 aa6.47□□□□□ -1.37
RNU6-840P-201ENST00000517275 FLIIQ13045 1269 aa6.47□□□□□ -1.37
RNU6-840P-201ENST00000517275 POTEFA5A3E0 1075 aa6.46□□□□□ -1.38
RNU6-840P-201ENST00000517275 C7P10643 843 aa6.46□□□□□ -1.38
RNU6-840P-201ENST00000517275 NPDC1Q9NQX5 325 aaPredicted RBP6.46□□□□□ -1.38
RNU6-840P-201ENST00000517275 GABBR2O75899 941 aa6.45□□□□□ -1.38
RNU6-840P-201ENST00000517275 GIGYF2Q6Y7W6 1299 aaKnown RBP6.45□□□□□ -1.38
RNU6-840P-201ENST00000517275 PELP1Q8IZL8 1130 aaKnown RBP6.45□□□□□ -1.38
RNU6-840P-201ENST00000517275 KDM4FA0A1W2PPD8 638 aa6.44□□□□□ -1.38
RNU6-840P-201ENST00000517275 SEC24BO95487 1268 aa6.44□□□□□ -1.38
RNU6-840P-201ENST00000517275 RBM27Q9P2N5 1060 aaKnown RBP6.44□□□□□ -1.38
RNU6-840P-201ENST00000517275 SUPT5HO00267 1087 aaKnown RBP6.43□□□□□ -1.38
RNU6-840P-201ENST00000517275 MS4A1P11836 297 aa6.43□□□□□ -1.38
RNU6-840P-201ENST00000517275 CLCN1P35523 988 aa6.43□□□□□ -1.38
RNU6-840P-201ENST00000517275 TTLL12Q14166 644 aaPredicted RBP6.43□□□□□ -1.38
RNU6-840P-201ENST00000517275 SH3D19Q5HYK7 790 aa6.43□□□□□ -1.38
RNU6-840P-201ENST00000517275 C3orf67Q6ZVT6 689 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms