RNA–Protein interactions for RNA: ENST00000512694.5

DDR1-268, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-268ENST00000512694 UBTFP17480 764 aaKnown RBP26.46■■□□□ 1.83
DDR1-268ENST00000512694 MLECQ14165 292 aa26.46■■□□□ 1.83
DDR1-268ENST00000512694 KIF14Q15058 1648 aa26.46■■□□□ 1.83
DDR1-268ENST00000512694 SCAPERQ9BY12 1400 aa26.45■■□□□ 1.82
DDR1-268ENST00000512694 LRRIQ1Q96JM4 1722 aa26.43■■□□□ 1.82
DDR1-268ENST00000512694 HSPA2P54652 639 aa26.43■■□□□ 1.82
DDR1-268ENST00000512694 PLCH2O75038 1416 aa26.42■■□□□ 1.82
DDR1-268ENST00000512694 CHIC1Q5VXU3 224 aa26.42■■□□□ 1.82
DDR1-268ENST00000512694 MAGI2Q86UL8 1455 aa26.42■■□□□ 1.82
DDR1-268ENST00000512694 ARHGAP35Q9NRY4 1499 aa26.41■■□□□ 1.82
DDR1-268ENST00000512694 FMN1Q68DA7 1419 aa26.4■■□□□ 1.82
DDR1-268ENST00000512694 ARHGAP5Q13017 1502 aa26.34■■□□□ 1.81
DDR1-268ENST00000512694 C9orf84Q5VXU9 1444 aa26.32■■□□□ 1.8
DDR1-268ENST00000512694 ATP10AO60312 1499 aa26.32■■□□□ 1.8
DDR1-268ENST00000512694 ARHGEF12Q9NZN5 1544 aa26.31■■□□□ 1.8
DDR1-268ENST00000512694 EFCAB2Q5VUJ9 269 aa26.31■■□□□ 1.8
DDR1-268ENST00000512694 PREX1Q8TCU6 1659 aa26.3■■□□□ 1.8
DDR1-268ENST00000512694 CDC42BPBQ9Y5S2 1711 aa26.3■■□□□ 1.8
DDR1-268ENST00000512694 CDK11AQ9UQ88 783 aaPredicted RBP26.29■■□□□ 1.8
DDR1-268ENST00000512694 TROQ12816 1431 aaPredicted RBP26.29■■□□□ 1.8
DDR1-268ENST00000512694 CLIP1P30622 1438 aa26.27■■□□□ 1.8
DDR1-268ENST00000512694 ZNF518AQ6AHZ1 1483 aa26.27■■□□□ 1.8
DDR1-268ENST00000512694 MYT1LQ9UL68 1186 aa26.26■■□□□ 1.79
DDR1-268ENST00000512694 KDM5CP41229 1560 aa26.25■■□□□ 1.79
DDR1-268ENST00000512694 DIP2CQ9Y2E4 1556 aa26.24■■□□□ 1.79
DDR1-268ENST00000512694 CEBPAP49715 358 aaPredicted RBP26.23■■□□□ 1.79
DDR1-268ENST00000512694 ABCA6Q8N139 1617 aa26.23■■□□□ 1.79
DDR1-268ENST00000512694 PREX2Q70Z35 1606 aa26.22■■□□□ 1.79
DDR1-268ENST00000512694 AFAP1Q8N556 730 aa26.22■■□□□ 1.79
DDR1-268ENST00000512694 ITSN2Q9NZM3 1697 aa26.2■■□□□ 1.78
DDR1-268ENST00000512694 CDC42BPAQ5VT25 1732 aa26.17■■□□□ 1.78
DDR1-268ENST00000512694 STRCQ7RTU9 1775 aa26.15■■□□□ 1.78
DDR1-268ENST00000512694 ABCC1P33527 1531 aa26.15■■□□□ 1.78
DDR1-268ENST00000512694 C3P01024 1663 aa26.15■■□□□ 1.78
DDR1-268ENST00000512694 SETD1BQ9UPS6 1966 aaKnown RBP26.13■■□□□ 1.77
DDR1-268ENST00000512694 CERKQ8TCT0 537 aa26.13■■□□□ 1.77
DDR1-268ENST00000512694 TRAPPC8Q9Y2L5 1435 aa26.12■■□□□ 1.77
DDR1-268ENST00000512694 REREQ9P2R6 1566 aa26.12■■□□□ 1.77
DDR1-268ENST00000512694 CCDC18Q5T9S5 1454 aa26.11■■□□□ 1.77
DDR1-268ENST00000512694 KIDINS220Q9ULH0 1771 aa26.1■■□□□ 1.77
DDR1-268ENST00000512694 UHRF1BP1Q6BDS2 1440 aa26.09■■□□□ 1.77
DDR1-268ENST00000512694 CASKIN1Q8WXD9 1431 aa26.09■■□□□ 1.77
DDR1-268ENST00000512694 MLH3Q9UHC1 1453 aa26.08■■□□□ 1.77
DDR1-268ENST00000512694 FYCO1Q9BQS8 1478 aa26.02■■□□□ 1.76
DDR1-268ENST00000512694 AGLP35573 1532 aa26.01■■□□□ 1.75
DDR1-268ENST00000512694 SUPT6HQ7KZ85 1726 aaKnown RBP26.01■■□□□ 1.75
DDR1-268ENST00000512694 SAMD9LQ8IVG5 1584 aa26.01■■□□□ 1.75
DDR1-268ENST00000512694 ESF1Q9H501 851 aaKnown RBP26.01■■□□□ 1.75
DDR1-268ENST00000512694 ZNF777Q9ULD5 760 aaPredicted RBP26■■□□□ 1.75
DDR1-268ENST00000512694 SYCP2Q9BX26 1530 aa25.99■■□□□ 1.75
DDR1-268ENST00000512694 DMRT2Q9Y5R5 561 aa25.94■■□□□ 1.74
DDR1-268ENST00000512694 MROH2AA6NES4 1674 aa25.92■■□□□ 1.74
DDR1-268ENST00000512694 CLTCQ00610 1675 aaKnown RBP25.9■■□□□ 1.74
DDR1-268ENST00000512694 CNTLNQ9NXG0 1405 aa25.89■■□□□ 1.74
DDR1-268ENST00000512694 GPATCH8Q9UKJ3 1502 aaKnown RBP25.89■■□□□ 1.74
DDR1-268ENST00000512694 ATP7AQ04656 1500 aa25.88■■□□□ 1.73
DDR1-268ENST00000512694 HNRNPMP52272 730 aaKnown RBP eCLIP25.88■■□□□ 1.73
DDR1-268ENST00000512694 SPAG9O60271 1321 aaKnown RBP25.88■■□□□ 1.73
DDR1-268ENST00000512694 INO80Q9ULG1 1556 aaPredicted RBP25.87■■□□□ 1.73
DDR1-268ENST00000512694 PTPRTO14522 1441 aa25.86■■□□□ 1.73
DDR1-268ENST00000512694 CAMSAP1Q5T5Y3 1602 aa25.84■■□□□ 1.73
DDR1-268ENST00000512694 NCOA1Q15788 1441 aa25.83■■□□□ 1.73
DDR1-268ENST00000512694 CCNB3Q8WWL7 1395 aa25.82■■□□□ 1.72
DDR1-268ENST00000512694 PLXNC1O60486 1568 aa25.81■■□□□ 1.72
DDR1-268ENST00000512694 MYO3AQ8NEV4 1616 aa25.81■■□□□ 1.72
DDR1-268ENST00000512694 CFDP1Q9UEE9 299 aaPredicted RBP25.8■■□□□ 1.72
DDR1-268ENST00000512694 LTBP4Q8N2S1 1624 aa25.8■■□□□ 1.72
DDR1-268ENST00000512694 ADGBQ8N7X0 1667 aa25.79■■□□□ 1.72
DDR1-268ENST00000512694 MTUS2Q5JR59 1369 aa25.79■■□□□ 1.72
DDR1-268ENST00000512694 A2MP01023 1474 aa25.79■■□□□ 1.72
DDR1-268ENST00000512694 PLEKHH2Q8IVE3 1493 aa25.79■■□□□ 1.72
DDR1-268ENST00000512694 ZNF142P52746 1687 aaPredicted RBP25.78■■□□□ 1.72
DDR1-268ENST00000512694 ZMYM3Q14202 1370 aa25.78■■□□□ 1.72
DDR1-268ENST00000512694 DISP3Q9P2K9 1392 aa25.78■■□□□ 1.72
DDR1-268ENST00000512694 NPATQ14207 1427 aa25.78■■□□□ 1.72
DDR1-268ENST00000512694 TIAM1Q13009 1591 aa25.78■■□□□ 1.72
DDR1-268ENST00000512694 KIAA1107Q9UPP5 1409 aa25.75■■□□□ 1.71
DDR1-268ENST00000512694 GGT6Q6P531 493 aa25.73■■□□□ 1.71
DDR1-268ENST00000512694 NCKAP5LQ9HCH0 1330 aa25.72■■□□□ 1.71
DDR1-268ENST00000512694 CEP170BQ9Y4F5 1589 aaPredicted RBP25.72■■□□□ 1.71
DDR1-268ENST00000512694 ZNF644Q9H582 1327 aaPredicted RBP25.71■■□□□ 1.71
DDR1-268ENST00000512694 SPATA31D1Q6ZQQ2 1576 aa25.71■■□□□ 1.71
DDR1-268ENST00000512694 EHBP1L1Q8N3D4 1523 aa25.71■■□□□ 1.71
DDR1-268ENST00000512694 PTPRKQ15262 1439 aa25.68■■□□□ 1.7
DDR1-268ENST00000512694 ILDR2Q71H61 639 aa25.67■■□□□ 1.7
DDR1-268ENST00000512694 IQSEC2Q5JU85 1478 aa25.65■■□□□ 1.7
DDR1-268ENST00000512694 ZNF335Q9H4Z2 1342 aaPredicted RBP25.64■■□□□ 1.7
DDR1-268ENST00000512694 MBD5Q9P267 1494 aa25.62■■□□□ 1.69
DDR1-268ENST00000512694 PLA2R1Q13018 1463 aa25.61■■□□□ 1.69
DDR1-268ENST00000512694 POLR1AO95602 1720 aaPredicted RBP25.6■■□□□ 1.69
DDR1-268ENST00000512694 TCOF1Q13428 1488 aaKnown RBP25.59■■□□□ 1.69
DDR1-268ENST00000512694 DNMT1P26358 1616 aaKnown RBP25.59■■□□□ 1.69
DDR1-268ENST00000512694 CEP162Q5TB80 1403 aa25.58■■□□□ 1.69
DDR1-268ENST00000512694 CAMSAP2Q08AD1 1489 aa25.56■■□□□ 1.68
DDR1-268ENST00000512694 A2ML1A8K2U0 1454 aa25.55■■□□□ 1.68
DDR1-268ENST00000512694 PKD2Q13563 968 aa25.55■■□□□ 1.68
DDR1-268ENST00000512694 CCDC141Q6ZP82 1450 aa25.54■■□□□ 1.68
DDR1-268ENST00000512694 RTEL1-TNFRSF6BF6WH68 1400 aa25.54■■□□□ 1.68
DDR1-268ENST00000512694 NCOA2Q15596 1464 aa25.53■■□□□ 1.68
DDR1-268ENST00000512694 UBAP1LF5GYI3 381 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 166.1 ms