RNA–Protein interactions for RNA: ENST00000504335.1

SMTN-221, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 2,608 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-221ENST00000504335 PABPN1Q86U42 306 aaKnown RBP eCLIP17.64■□□□□ 0.41
SMTN-221ENST00000504335 RUSC2Q8N2Y8 1516 aa17.63■□□□□ 0.41
SMTN-221ENST00000504335 SETD5Q9C0A6 1442 aa17.62■□□□□ 0.41
SMTN-221ENST00000504335 TNNT2P45379 298 aaPredicted RBP17.62■□□□□ 0.41
SMTN-221ENST00000504335 ZHX1Q9UKY1 873 aaPredicted RBP17.62■□□□□ 0.41
SMTN-221ENST00000504335 DMTNQ08495 405 aa17.61■□□□□ 0.41
SMTN-221ENST00000504335 KIAA1211Q6ZU35 1233 aa17.61■□□□□ 0.41
SMTN-221ENST00000504335 BRD2P25440 801 aaKnown RBP17.6■□□□□ 0.41
SMTN-221ENST00000504335 FHAD1B1AJZ9 1412 aa17.6■□□□□ 0.41
SMTN-221ENST00000504335 FTSJ3Q8IY81 847 aaKnown RBP17.6■□□□□ 0.41
SMTN-221ENST00000504335 PRKRIP1Q9H875 184 aaPredicted RBP17.6■□□□□ 0.41
SMTN-221ENST00000504335 CNTLNQ9NXG0 1405 aa17.59■□□□□ 0.41
SMTN-221ENST00000504335 MRE11P49959 708 aa17.59■□□□□ 0.41
SMTN-221ENST00000504335 BICRAQ9NZM4 1560 aa17.58■□□□□ 0.4
SMTN-221ENST00000504335 MYH16Q9H6N6 1097 aa17.58■□□□□ 0.4
SMTN-221ENST00000504335 NCOA2Q15596 1464 aa17.58■□□□□ 0.4
SMTN-221ENST00000504335 TMEM51Q9NW97 253 aa17.57■□□□□ 0.4
SMTN-221ENST00000504335 KIF20AO95235 890 aa17.55■□□□□ 0.4
SMTN-221ENST00000504335 PPP4R3BQ5MIZ7 849 aa17.55■□□□□ 0.4
SMTN-221ENST00000504335 ISY1Q9ULR0 285 aaKnown RBP17.55■□□□□ 0.4
SMTN-221ENST00000504335 TRIM44Q96DX7 344 aaPredicted RBP17.55■□□□□ 0.4
SMTN-221ENST00000504335 PANK2Q9BZ23 570 aa17.54■□□□□ 0.4
SMTN-221ENST00000504335 EXOC6Q8TAG9 804 aa17.53■□□□□ 0.4
SMTN-221ENST00000504335 TONSLQ96HA7 1378 aa17.53■□□□□ 0.4
SMTN-221ENST00000504335 RRP1P56182 461 aaKnown RBP17.53■□□□□ 0.4
SMTN-221ENST00000504335 RIPK4P57078 832 aa17.53■□□□□ 0.4
SMTN-221ENST00000504335 ERBB4Q15303 1308 aa17.52■□□□□ 0.39
SMTN-221ENST00000504335 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.51■□□□□ 0.39
SMTN-221ENST00000504335 KANK4Q5T7N3 995 aaPredicted RBP17.51■□□□□ 0.39
SMTN-221ENST00000504335 TEX2Q8IWB9 1127 aa17.51■□□□□ 0.39
SMTN-221ENST00000504335 OFD1O75665 1012 aa17.5■□□□□ 0.39
SMTN-221ENST00000504335 TAF3Q5VWG9 929 aa17.5■□□□□ 0.39
SMTN-221ENST00000504335 FAM13BQ9NYF5 915 aa17.5■□□□□ 0.39
SMTN-221ENST00000504335 FAM161AQ3B820 660 aa17.49■□□□□ 0.39
SMTN-221ENST00000504335 ANP32BQ92688 251 aaKnown RBP17.49■□□□□ 0.39
SMTN-221ENST00000504335 GTPBP4Q9BZE4 634 aaKnown RBP17.49■□□□□ 0.39
SMTN-221ENST00000504335 VGFO15240 615 aaPredicted RBP17.48■□□□□ 0.39
SMTN-221ENST00000504335 ZNF830Q96NB3 372 aaPredicted RBP17.48■□□□□ 0.39
SMTN-221ENST00000504335 ZFP91Q96JP5 570 aaPredicted RBP17.47■□□□□ 0.39
SMTN-221ENST00000504335 BAZ1AQ9NRL2 1556 aaPredicted RBP17.47■□□□□ 0.39
SMTN-221ENST00000504335 LETM1O95202 739 aaPredicted RBP17.46■□□□□ 0.39
SMTN-221ENST00000504335 CHRM1P11229 460 aaPredicted RBP17.46■□□□□ 0.39
SMTN-221ENST00000504335 ZSCAN20P17040 1043 aaPredicted RBP17.46■□□□□ 0.39
SMTN-221ENST00000504335 BECN1Q14457 450 aa17.44■□□□□ 0.38
SMTN-221ENST00000504335 GRPEL1Q9HAV7 217 aa17.44■□□□□ 0.38
SMTN-221ENST00000504335 MROH2BQ7Z745 1585 aa17.43■□□□□ 0.38
SMTN-221ENST00000504335 ERICH3Q5RHP9 1530 aa17.43■□□□□ 0.38
SMTN-221ENST00000504335 CECR2Q9BXF3 1484 aa17.42■□□□□ 0.38
SMTN-221ENST00000504335 PRDM10Q9NQV6 1147 aa17.42■□□□□ 0.38
SMTN-221ENST00000504335 CCDC94Q9BW85 323 aaPredicted RBP17.41■□□□□ 0.38
SMTN-221ENST00000504335 WIZO95785 1651 aa17.41■□□□□ 0.38
SMTN-221ENST00000504335 PLCD3Q8N3E9 789 aa17.41■□□□□ 0.38
SMTN-221ENST00000504335 DYNC1I1O14576 645 aa17.4■□□□□ 0.38
SMTN-221ENST00000504335 C8orf34Q49A92 452 aa17.4■□□□□ 0.38
SMTN-221ENST00000504335 KTN1Q86UP2 1357 aaKnown RBP17.39■□□□□ 0.38
SMTN-221ENST00000504335 PHLDB1Q86UU1 1377 aa17.39■□□□□ 0.37
SMTN-221ENST00000504335 CDK11BP21127 795 aaKnown RBP17.38■□□□□ 0.37
SMTN-221ENST00000504335 HSPA5P11021 654 aaKnown RBP17.37■□□□□ 0.37
SMTN-221ENST00000504335 FOXD1Q16676 465 aa17.37■□□□□ 0.37
SMTN-221ENST00000504335 ZSCAN30Q86W11 494 aa17.37■□□□□ 0.37
SMTN-221ENST00000504335 RCAN3Q9UKA8 241 aa17.37■□□□□ 0.37
SMTN-221ENST00000504335 VGLL3A8MV65 326 aa17.36■□□□□ 0.37
SMTN-221ENST00000504335 SYNJ1O43426 1573 aa17.36■□□□□ 0.37
SMTN-221ENST00000504335 MCM4P33991 863 aa17.34■□□□□ 0.37
SMTN-221ENST00000504335 EIF4G2P78344 907 aaKnown RBP eCLIP17.34■□□□□ 0.37
SMTN-221ENST00000504335 DHX37Q8IY37 1157 aaKnown RBP17.34■□□□□ 0.37
SMTN-221ENST00000504335 SECISBP2LQ93073 1101 aaKnown RBP17.34■□□□□ 0.37
SMTN-221ENST00000504335 ARAP1Q96P48 1450 aa17.34■□□□□ 0.37
SMTN-221ENST00000504335 CHMP4AQ9BY43 222 aa17.34■□□□□ 0.37
SMTN-221ENST00000504335 ANTXR1Q9H6X2 564 aa17.34■□□□□ 0.37
SMTN-221ENST00000504335 MSNP26038 577 aaKnown RBP17.33■□□□□ 0.36
SMTN-221ENST00000504335 CCDC7Q96M83 1385 aa17.33■□□□□ 0.36
SMTN-221ENST00000504335 GZF1Q9H116 711 aaPredicted RBP17.33■□□□□ 0.36
SMTN-221ENST00000504335 UQCRHLA0A096LP55 91 aa17.32■□□□□ 0.36
SMTN-221ENST00000504335 UQCRHP07919 91 aa17.32■□□□□ 0.36
SMTN-221ENST00000504335 MAP3K1Q13233 1512 aa17.32■□□□□ 0.36
SMTN-221ENST00000504335 RAPGEF2Q9Y4G8 1499 aa17.32■□□□□ 0.36
SMTN-221ENST00000504335 NCOA1Q15788 1441 aa17.31■□□□□ 0.36
SMTN-221ENST00000504335 TRAK2O60296 914 aa17.31■□□□□ 0.36
SMTN-221ENST00000504335 CENPQQ7L2Z9 268 aaPredicted RBP17.31■□□□□ 0.36
SMTN-221ENST00000504335 R3HCC1Q9Y3T6 440 aaKnown RBP17.31■□□□□ 0.36
SMTN-221ENST00000504335 CCDC173Q0VFZ6 552 aa17.31■□□□□ 0.36
SMTN-221ENST00000504335 DNTTIP2Q5QJE6 756 aaKnown RBP17.31■□□□□ 0.36
SMTN-221ENST00000504335 SLKQ9H2G2 1235 aaPredicted RBP17.3■□□□□ 0.36
SMTN-221ENST00000504335 IRX3P78415 501 aaPredicted RBP17.3■□□□□ 0.36
SMTN-221ENST00000504335 KDM2BQ8NHM5 1336 aa17.29■□□□□ 0.36
SMTN-221ENST00000504335 BCCIPQ9P287 314 aaKnown RBP eCLIP17.28■□□□□ 0.36
SMTN-221ENST00000504335 PPP1R9BQ96SB3 815 aa17.27■□□□□ 0.36
SMTN-221ENST00000504335 SLC20A2Q08357 652 aa17.27■□□□□ 0.35
SMTN-221ENST00000504335 RGS22Q8NE09 1264 aa17.27■□□□□ 0.35
SMTN-221ENST00000504335 SKAP1Q86WV1 359 aa17.26■□□□□ 0.35
SMTN-221ENST00000504335 ABCA5Q8WWZ7 1642 aa17.26■□□□□ 0.35
SMTN-221ENST00000504335 PDE3BQ13370 1112 aa17.25■□□□□ 0.35
SMTN-221ENST00000504335 CSPP1Q1MSJ5 1256 aa17.25■□□□□ 0.35
SMTN-221ENST00000504335 HS1BP3Q53T59 392 aa17.24■□□□□ 0.35
SMTN-221ENST00000504335 KDM5BQ9UGL1 1544 aa17.24■□□□□ 0.35
SMTN-221ENST00000504335 DDX11L8A8MPP1 907 aa17.24■□□□□ 0.35
SMTN-221ENST00000504335 ARID3AQ99856 593 aa17.23■□□□□ 0.35
SMTN-221ENST00000504335 MYOM3Q5VTT5 1437 aa17.23■□□□□ 0.35
SMTN-221ENST00000504335 SMARCA4P51532 1647 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms