RNA–Protein interactions for RNA: ENST00000504295.1

COPB2-204, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 3,524 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-204ENST00000504295 PZPP20742 1482 aa9.62□□□□□ -0.87
COPB2-204ENST00000504295 NUP153P49790 1475 aaKnown RBP9.62□□□□□ -0.87
COPB2-204ENST00000504295 IFT140Q96RY7 1462 aa9.61□□□□□ -0.87
COPB2-204ENST00000504295 KIAA1210Q9ULL0 1709 aa9.61□□□□□ -0.87
COPB2-204ENST00000504295 MIER1Q8N108 512 aa9.6□□□□□ -0.87
COPB2-204ENST00000504295 CEP152O94986 1710 aa9.6□□□□□ -0.87
COPB2-204ENST00000504295 FHOD3Q2V2M9 1422 aa9.6□□□□□ -0.87
COPB2-204ENST00000504295 RPRD2Q5VT52 1461 aaKnown RBP9.6□□□□□ -0.87
COPB2-204ENST00000504295 UHRF1BP1Q6BDS2 1440 aa9.59□□□□□ -0.87
COPB2-204ENST00000504295 MYO3AQ8NEV4 1616 aa9.58□□□□□ -0.88
COPB2-204ENST00000504295 NUP160Q12769 1436 aa9.58□□□□□ -0.88
COPB2-204ENST00000504295 SPHKAPQ2M3C7 1700 aa9.57□□□□□ -0.88
COPB2-204ENST00000504295 PPRC1Q5VV67 1664 aaKnown RBP9.57□□□□□ -0.88
COPB2-204ENST00000504295 NCOA1Q15788 1441 aa9.57□□□□□ -0.88
COPB2-204ENST00000504295 CCER1Q8TC90 406 aaPredicted RBP9.57□□□□□ -0.88
COPB2-204ENST00000504295 VWDEQ8N2E2 1590 aa9.55□□□□□ -0.88
COPB2-204ENST00000504295 GTF3C3Q9Y5Q9 886 aa9.54□□□□□ -0.88
COPB2-204ENST00000504295 KIAA0586Q9BVV6 1533 aa9.53□□□□□ -0.88
COPB2-204ENST00000504295 SAMD9LQ8IVG5 1584 aa9.53□□□□□ -0.88
COPB2-204ENST00000504295 MAGI1Q96QZ7 1491 aaPredicted RBP9.53□□□□□ -0.88
COPB2-204ENST00000504295 SYNJ2O15056 1496 aa9.52□□□□□ -0.88
COPB2-204ENST00000504295 CDK13Q14004 1512 aaKnown RBP9.52□□□□□ -0.88
COPB2-204ENST00000504295 PRDM15P57071 1507 aaPredicted RBP9.52□□□□□ -0.89
COPB2-204ENST00000504295 ATP10AO60312 1499 aa9.51□□□□□ -0.89
COPB2-204ENST00000504295 GRIN2AQ12879 1464 aa9.51□□□□□ -0.89
COPB2-204ENST00000504295 ZNF608Q9ULD9 1512 aaPredicted RBP9.51□□□□□ -0.89
COPB2-204ENST00000504295 DAPK1P53355 1430 aa9.5□□□□□ -0.89
COPB2-204ENST00000504295 CHD1O14646 1710 aa9.5□□□□□ -0.89
COPB2-204ENST00000504295 INO80Q9ULG1 1556 aaPredicted RBP9.5□□□□□ -0.89
COPB2-204ENST00000504295 CLASP1Q7Z460 1538 aa9.49□□□□□ -0.89
COPB2-204ENST00000504295 ARAP3Q8WWN8 1544 aa9.49□□□□□ -0.89
COPB2-204ENST00000504295 ABCC5O15440 1437 aa9.48□□□□□ -0.89
COPB2-204ENST00000504295 MROH1Q8NDA8 1641 aa9.48□□□□□ -0.89
COPB2-204ENST00000504295 RALGAPBQ86X10 1494 aa9.48□□□□□ -0.89
COPB2-204ENST00000504295 EIF2AK4Q9P2K8 1649 aaKnown RBP9.47□□□□□ -0.89
COPB2-204ENST00000504295 MADDQ8WXG6 1647 aa9.47□□□□□ -0.89
COPB2-204ENST00000504295 ANKRD30BQ9BXX2 1392 aa9.46□□□□□ -0.89
COPB2-204ENST00000504295 CAMSAP2Q08AD1 1489 aa9.46□□□□□ -0.89
COPB2-204ENST00000504295 SUPT16HQ9Y5B9 1047 aaKnown RBP9.46□□□□□ -0.89
COPB2-204ENST00000504295 ABCA9Q8IUA7 1624 aa9.46□□□□□ -0.9
COPB2-204ENST00000504295 CCER2I3L3R5 266 aa9.46□□□□□ -0.9
COPB2-204ENST00000504295 INSRP06213 1382 aa9.46□□□□□ -0.9
COPB2-204ENST00000504295 USP32Q8NFA0 1604 aa9.46□□□□□ -0.9
COPB2-204ENST00000504295 DHX29Q7Z478 1369 aaKnown RBP9.44□□□□□ -0.9
COPB2-204ENST00000504295 DUOX2Q9NRD8 1548 aa9.44□□□□□ -0.9
COPB2-204ENST00000504295 RNF123Q5XPI4 1314 aa9.44□□□□□ -0.9
COPB2-204ENST00000504295 GPATCH8Q9UKJ3 1502 aaKnown RBP9.44□□□□□ -0.9
COPB2-204ENST00000504295 UBTFP17480 764 aaKnown RBP9.44□□□□□ -0.9
COPB2-204ENST00000504295 ABCA6Q8N139 1617 aa9.43□□□□□ -0.9
COPB2-204ENST00000504295 TTC37Q6PGP7 1564 aa9.43□□□□□ -0.9
COPB2-204ENST00000504295 CNTLNQ9NXG0 1405 aa9.43□□□□□ -0.9
COPB2-204ENST00000504295 CENPBP07199 599 aaPredicted RBP9.43□□□□□ -0.9
COPB2-204ENST00000504295 SHPRHQ149N8 1683 aa9.41□□□□□ -0.9
COPB2-204ENST00000504295 MYT1Q01538 1121 aa9.41□□□□□ -0.9
COPB2-204ENST00000504295 TDRD9Q8NDG6 1382 aaKnown RBP9.41□□□□□ -0.9
COPB2-204ENST00000504295 ABCC2Q92887 1545 aa9.4□□□□□ -0.9
COPB2-204ENST00000504295 OSCARQ8IYS5 282 aa9.39□□□□□ -0.91
COPB2-204ENST00000504295 PIK3C2BO00750 1634 aa9.39□□□□□ -0.91
COPB2-204ENST00000504295 SYNMO15061 1565 aa9.38□□□□□ -0.91
COPB2-204ENST00000504295 TSHZ2Q9NRE2 1034 aa9.37□□□□□ -0.91
COPB2-204ENST00000504295 ANKRD26Q9UPS8 1709 aa9.37□□□□□ -0.91
COPB2-204ENST00000504295 TROQ12816 1431 aaPredicted RBP9.37□□□□□ -0.91
COPB2-204ENST00000504295 CHMP7Q8WUX9 453 aaPredicted RBP9.36□□□□□ -0.91
COPB2-204ENST00000504295 TET3O43151 1660 aa9.36□□□□□ -0.91
COPB2-204ENST00000504295 MROH2AA6NES4 1674 aa9.36□□□□□ -0.91
COPB2-204ENST00000504295 ZCCHC11Q5TAX3 1644 aaKnown RBP9.36□□□□□ -0.91
COPB2-204ENST00000504295 GPRASP1Q5JY77 1395 aa9.36□□□□□ -0.91
COPB2-204ENST00000504295 DNAJC5Q9H3Z4 198 aa9.36□□□□□ -0.91
COPB2-204ENST00000504295 LRPPRCP42704 1394 aaKnown RBP9.35□□□□□ -0.91
COPB2-204ENST00000504295 ABCC1P33527 1531 aa9.35□□□□□ -0.91
COPB2-204ENST00000504295 PPLO60437 1756 aa9.35□□□□□ -0.91
COPB2-204ENST00000504295 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.34□□□□□ -0.91
COPB2-204ENST00000504295 UHRF1BP1LA0JNW5 1464 aa9.34□□□□□ -0.91
COPB2-204ENST00000504295 NRXN1Q9ULB1 1477 aa9.34□□□□□ -0.91
COPB2-204ENST00000504295 PLA2R1Q13018 1463 aa9.33□□□□□ -0.92
COPB2-204ENST00000504295 WDR7Q9Y4E6 1490 aa9.33□□□□□ -0.92
COPB2-204ENST00000504295 FBLN2P98095 1184 aa9.32□□□□□ -0.92
COPB2-204ENST00000504295 CLTCQ00610 1675 aaKnown RBP9.32□□□□□ -0.92
COPB2-204ENST00000504295 SETD1AO15047 1707 aaKnown RBP9.32□□□□□ -0.92
COPB2-204ENST00000504295 TRPM2O94759 1503 aa9.32□□□□□ -0.92
COPB2-204ENST00000504295 FAM135AQ9P2D6 1515 aa9.31□□□□□ -0.92
COPB2-204ENST00000504295 CCDC141Q6ZP82 1450 aa9.31□□□□□ -0.92
COPB2-204ENST00000504295 ZNF518AQ6AHZ1 1483 aa9.3□□□□□ -0.92
COPB2-204ENST00000504295 ZFYVE16Q7Z3T8 1539 aa9.3□□□□□ -0.92
COPB2-204ENST00000504295 WASHC2AQ641Q2 1341 aa9.3□□□□□ -0.92
COPB2-204ENST00000504295 KCNH8Q96L42 1107 aa9.3□□□□□ -0.92
COPB2-204ENST00000504295 LMTK2Q8IWU2 1503 aa9.29□□□□□ -0.92
COPB2-204ENST00000504295 KIAA1107Q9UPP5 1409 aa9.29□□□□□ -0.92
COPB2-204ENST00000504295 CLTCL1P53675 1640 aa9.29□□□□□ -0.92
COPB2-204ENST00000504295 HNRNPUL2Q1KMD3 747 aaKnown RBP9.29□□□□□ -0.92
COPB2-204ENST00000504295 BLMP54132 1417 aaPredicted RBP9.28□□□□□ -0.92
COPB2-204ENST00000504295 ATP10BO94823 1461 aa9.28□□□□□ -0.92
COPB2-204ENST00000504295 COL17A1Q9UMD9 1497 aaPredicted RBP9.28□□□□□ -0.92
COPB2-204ENST00000504295 CCDC7Q96M83 1385 aa9.28□□□□□ -0.92
COPB2-204ENST00000504295 SETBP1Q9Y6X0 1596 aa9.28□□□□□ -0.92
COPB2-204ENST00000504295 SMG6Q86US8 1419 aaKnown RBP9.27□□□□□ -0.93
COPB2-204ENST00000504295 SIGLEC1Q9BZZ2 1709 aa9.26□□□□□ -0.93
COPB2-204ENST00000504295 ARID4BQ4LE39 1312 aaPredicted RBP9.26□□□□□ -0.93
COPB2-204ENST00000504295 ERICH6BQ5W0A0 696 aa9.25□□□□□ -0.93
COPB2-204ENST00000504295 KIDINS220Q9ULH0 1771 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms