RNA–Protein interactions for RNA: ENST00000503341.1

ARHGEF28-205, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 2

Gene ARHGEF28, Length 1,926 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-205ENST00000503341 CDC42BPAQ5VT25 1732 aa27.92■■■□□ 2.06
ARHGEF28-205ENST00000503341 UHRF1BP1LA0JNW5 1464 aa27.91■■■□□ 2.06
ARHGEF28-205ENST00000503341 ROCK1Q13464 1354 aa27.91■■■□□ 2.06
ARHGEF28-205ENST00000503341 ZNF777Q9ULD5 760 aaPredicted RBP27.86■■■□□ 2.05
ARHGEF28-205ENST00000503341 ZNF316A6NFI3 1004 aaPredicted RBP27.85■■■□□ 2.05
ARHGEF28-205ENST00000503341 KDM5BQ9UGL1 1544 aa27.82■■■□□ 2.04
ARHGEF28-205ENST00000503341 KDM6BO15054 1643 aa27.82■■■□□ 2.04
ARHGEF28-205ENST00000503341 OSCARQ8IYS5 282 aa27.82■■■□□ 2.04
ARHGEF28-205ENST00000503341 ZCCHC11Q5TAX3 1644 aaKnown RBP27.8■■■□□ 2.04
ARHGEF28-205ENST00000503341 SIN3AQ96ST3 1273 aa27.79■■■□□ 2.04
ARHGEF28-205ENST00000503341 CROCC2H7BZ55 1655 aa27.77■■■□□ 2.04
ARHGEF28-205ENST00000503341 PREX2Q70Z35 1606 aa27.76■■■□□ 2.03
ARHGEF28-205ENST00000503341 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.75■■■□□ 2.03
ARHGEF28-205ENST00000503341 ADGRL2O95490 1459 aa27.74■■■□□ 2.03
ARHGEF28-205ENST00000503341 CDC42BPBQ9Y5S2 1711 aa27.74■■■□□ 2.03
ARHGEF28-205ENST00000503341 ADGBQ8N7X0 1667 aa27.74■■■□□ 2.03
ARHGEF28-205ENST00000503341 NCOA1Q15788 1441 aa27.73■■■□□ 2.03
ARHGEF28-205ENST00000503341 TTC37Q6PGP7 1564 aa27.73■■■□□ 2.03
ARHGEF28-205ENST00000503341 ACIN1Q9UKV3 1341 aaKnown RBP27.73■■■□□ 2.03
ARHGEF28-205ENST00000503341 NEUROD1Q13562 356 aa27.72■■■□□ 2.03
ARHGEF28-205ENST00000503341 TIMELESSQ9UNS1 1208 aa27.72■■■□□ 2.03
ARHGEF28-205ENST00000503341 TRIM52Q96A61 297 aa27.71■■■□□ 2.03
ARHGEF28-205ENST00000503341 SHANK2Q9UPX8 1470 aa27.69■■■□□ 2.02
ARHGEF28-205ENST00000503341 SAMD9LQ8IVG5 1584 aa27.68■■■□□ 2.02
ARHGEF28-205ENST00000503341 ARHGEF5Q12774 1597 aa27.68■■■□□ 2.02
ARHGEF28-205ENST00000503341 DIEXFQ68CQ4 756 aaKnown RBP27.67■■■□□ 2.02
ARHGEF28-205ENST00000503341 MBD5Q9P267 1494 aa27.67■■■□□ 2.02
ARHGEF28-205ENST00000503341 ANKRD30AQ9BXX3 1397 aa27.67■■■□□ 2.02
ARHGEF28-205ENST00000503341 KCNH8Q96L42 1107 aa27.67■■■□□ 2.02
ARHGEF28-205ENST00000503341 DENND4BO75064 1496 aaPredicted RBP27.66■■■□□ 2.02
ARHGEF28-205ENST00000503341 HNRNPMP52272 730 aaKnown RBP eCLIP27.65■■■□□ 2.02
ARHGEF28-205ENST00000503341 MYO5CQ9NQX4 1742 aa27.64■■■□□ 2.02
ARHGEF28-205ENST00000503341 MPHOSPH9Q99550 1183 aa27.63■■■□□ 2.01
ARHGEF28-205ENST00000503341 ARHGAP5Q13017 1502 aa27.63■■■□□ 2.01
ARHGEF28-205ENST00000503341 C9orf84Q5VXU9 1444 aa27.63■■■□□ 2.01
ARHGEF28-205ENST00000503341 TSPY4P0CV99 314 aa27.61■■■□□ 2.01
ARHGEF28-205ENST00000503341 TSPY10P0CW01 314 aa27.61■■■□□ 2.01
ARHGEF28-205ENST00000503341 RSPH4AQ5TD94 716 aa27.61■■■□□ 2.01
ARHGEF28-205ENST00000503341 CCDC141Q6ZP82 1450 aa27.58■■■□□ 2.01
ARHGEF28-205ENST00000503341 PLCH2O75038 1416 aa27.58■■■□□ 2.01
ARHGEF28-205ENST00000503341 KIAA1107Q9UPP5 1409 aa27.54■■■□□ 2
ARHGEF28-205ENST00000503341 PLEKHH2Q8IVE3 1493 aa27.54■■■□□ 2
ARHGEF28-205ENST00000503341 WDR7Q9Y4E6 1490 aa27.54■■■□□ 2
ARHGEF28-205ENST00000503341 SYCP2Q9BX26 1530 aa27.54■■■□□ 2
ARHGEF28-205ENST00000503341 ANKRD50Q9ULJ7 1429 aa27.54■■■□□ 2
ARHGEF28-205ENST00000503341 PPP1R15AO75807 674 aaPredicted RBP27.53■■■□□ 2
ARHGEF28-205ENST00000503341 TONSLQ96HA7 1378 aa27.52■■■□□ 2
ARHGEF28-205ENST00000503341 EFCAB2Q5VUJ9 269 aa27.49■■□□□ 1.99
ARHGEF28-205ENST00000503341 PZPP20742 1482 aa27.49■■□□□ 1.99
ARHGEF28-205ENST00000503341 MAST1Q9Y2H9 1570 aa27.48■■□□□ 1.99
ARHGEF28-205ENST00000503341 SLC4A1APQ9BWU0 796 aaKnown RBP27.47■■□□□ 1.99
ARHGEF28-205ENST00000503341 KIF15Q9NS87 1388 aa27.47■■□□□ 1.99
ARHGEF28-205ENST00000503341 ARAP3Q8WWN8 1544 aa27.47■■□□□ 1.99
ARHGEF28-205ENST00000503341 ARHGEF12Q9NZN5 1544 aa27.46■■□□□ 1.99
ARHGEF28-205ENST00000503341 FOXD1Q16676 465 aa27.45■■□□□ 1.98
ARHGEF28-205ENST00000503341 ASXL2Q76L83 1435 aa27.44■■□□□ 1.98
ARHGEF28-205ENST00000503341 ANKRD30BQ9BXX2 1392 aa27.44■■□□□ 1.98
ARHGEF28-205ENST00000503341 ABCA9Q8IUA7 1624 aa27.41■■□□□ 1.98
ARHGEF28-205ENST00000503341 ABCC1P33527 1531 aa27.41■■□□□ 1.98
ARHGEF28-205ENST00000503341 NPM1P06748 294 aaKnown RBP eCLIP27.39■■□□□ 1.98
ARHGEF28-205ENST00000503341 KDM5DQ9BY66 1539 aa27.36■■□□□ 1.97
ARHGEF28-205ENST00000503341 PLXNC1O60486 1568 aa27.36■■□□□ 1.97
ARHGEF28-205ENST00000503341 NUP155O75694 1391 aa27.35■■□□□ 1.97
ARHGEF28-205ENST00000503341 RPRD2Q5VT52 1461 aaKnown RBP27.34■■□□□ 1.97
ARHGEF28-205ENST00000503341 TRAPPC8Q9Y2L5 1435 aa27.33■■□□□ 1.97
ARHGEF28-205ENST00000503341 PKD2Q13563 968 aa27.31■■□□□ 1.96
ARHGEF28-205ENST00000503341 FANCAO15360 1455 aa27.3■■□□□ 1.96
ARHGEF28-205ENST00000503341 DUOX2Q9NRD8 1548 aa27.26■■□□□ 1.95
ARHGEF28-205ENST00000503341 L3MBTL2Q969R5 705 aa27.26■■□□□ 1.95
ARHGEF28-205ENST00000503341 RTEL1-TNFRSF6BF6WH68 1400 aa27.24■■□□□ 1.95
ARHGEF28-205ENST00000503341 UNC13BO14795 1591 aa27.23■■□□□ 1.95
ARHGEF28-205ENST00000503341 AFAP1Q8N556 730 aa27.22■■□□□ 1.95
ARHGEF28-205ENST00000503341 TEX14Q8IWB6 1497 aa27.21■■□□□ 1.95
ARHGEF28-205ENST00000503341 SPAG9O60271 1321 aaKnown RBP27.21■■□□□ 1.95
ARHGEF28-205ENST00000503341 ERBINQ96RT1 1412 aa27.21■■□□□ 1.95
ARHGEF28-205ENST00000503341 MIER1Q8N108 512 aa27.2■■□□□ 1.95
ARHGEF28-205ENST00000503341 FAM135AQ9P2D6 1515 aa27.2■■□□□ 1.94
ARHGEF28-205ENST00000503341 ADGRL1O94910 1474 aa27.19■■□□□ 1.94
ARHGEF28-205ENST00000503341 ZFYVE16Q7Z3T8 1539 aa27.17■■□□□ 1.94
ARHGEF28-205ENST00000503341 SCAPERQ9BY12 1400 aa27.17■■□□□ 1.94
ARHGEF28-205ENST00000503341 CD109Q6YHK3 1445 aa27.15■■□□□ 1.94
ARHGEF28-205ENST00000503341 RIMBP3CA6NJZ7 1639 aa27.13■■□□□ 1.93
ARHGEF28-205ENST00000503341 RIMBP3BA6NNM3 1639 aa27.13■■□□□ 1.93
ARHGEF28-205ENST00000503341 RIMBP3Q9UFD9 1639 aa27.13■■□□□ 1.93
ARHGEF28-205ENST00000503341 MAGI2Q86UL8 1455 aa27.13■■□□□ 1.93
ARHGEF28-205ENST00000503341 CYB5RLQ6IPT4 315 aa27.12■■□□□ 1.93
ARHGEF28-205ENST00000503341 INO80Q9ULG1 1556 aaPredicted RBP27.12■■□□□ 1.93
ARHGEF28-205ENST00000503341 IQGAP3Q86VI3 1631 aa27.12■■□□□ 1.93
ARHGEF28-205ENST00000503341 ATP7AQ04656 1500 aa27.11■■□□□ 1.93
ARHGEF28-205ENST00000503341 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.1■■□□□ 1.93
ARHGEF28-205ENST00000503341 HIRIP3Q9BW71 556 aaPredicted RBP27.1■■□□□ 1.93
ARHGEF28-205ENST00000503341 CFAP74Q9C0B2 1584 aa27.08■■□□□ 1.93
ARHGEF28-205ENST00000503341 NBPF8Q3BBV2 869 aa27.07■■□□□ 1.92
ARHGEF28-205ENST00000503341 ZNF518AQ6AHZ1 1483 aa27.02■■□□□ 1.92
ARHGEF28-205ENST00000503341 PLA2R1Q13018 1463 aa26.98■■□□□ 1.91
ARHGEF28-205ENST00000503341 MYT1LQ9UL68 1186 aa26.98■■□□□ 1.91
ARHGEF28-205ENST00000503341 KIDINS220Q9ULH0 1771 aa26.98■■□□□ 1.91
ARHGEF28-205ENST00000503341 DHX29Q7Z478 1369 aaKnown RBP26.97■■□□□ 1.91
ARHGEF28-205ENST00000503341 DEPDC5O75140 1603 aa26.97■■□□□ 1.91
ARHGEF28-205ENST00000503341 HSPA5P11021 654 aaKnown RBP26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms