RNA–Protein interactions for RNA: ENST00000494943.5

PHC3-214, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-214ENST00000494943 FAM161AQ3B820 660 aa7.84□□□□□ -1.15
PHC3-214ENST00000494943 A0A0U1RQG5 324 aaPredicted RBP7.84□□□□□ -1.16
PHC3-214ENST00000494943 PHLDB1Q86UU1 1377 aa7.83□□□□□ -1.16
PHC3-214ENST00000494943 CHAF1AQ13111 956 aaPredicted RBP7.83□□□□□ -1.16
PHC3-214ENST00000494943 CFTRP13569 1480 aa7.82□□□□□ -1.16
PHC3-214ENST00000494943 ROCK2O75116 1388 aaKnown RBP7.82□□□□□ -1.16
PHC3-214ENST00000494943 CENPQQ7L2Z9 268 aaPredicted RBP7.82□□□□□ -1.16
PHC3-214ENST00000494943 SOGA1O94964 1423 aa7.82□□□□□ -1.16
PHC3-214ENST00000494943 ABCC8Q09428 1581 aa7.81□□□□□ -1.16
PHC3-214ENST00000494943 KTN1Q86UP2 1357 aaKnown RBP7.81□□□□□ -1.16
PHC3-214ENST00000494943 RCAN3Q9UKA8 241 aa7.8□□□□□ -1.16
PHC3-214ENST00000494943 CCDC88BA6NC98 1476 aa7.8□□□□□ -1.16
PHC3-214ENST00000494943 CLCN1P35523 988 aa7.8□□□□□ -1.16
PHC3-214ENST00000494943 NESP48681 1621 aa7.8□□□□□ -1.16
PHC3-214ENST00000494943 HSCBQ8IWL3 235 aa7.8□□□□□ -1.16
PHC3-214ENST00000494943 ARXQ96QS3 562 aa7.8□□□□□ -1.16
PHC3-214ENST00000494943 RRP1P56182 461 aaKnown RBP7.8□□□□□ -1.16
PHC3-214ENST00000494943 BACH2Q9BYV9 841 aa7.8□□□□□ -1.16
PHC3-214ENST00000494943 CENPJQ9HC77 1338 aaPredicted RBP7.79□□□□□ -1.16
PHC3-214ENST00000494943 PTMAP06454 111 aaKnown RBP7.79□□□□□ -1.16
PHC3-214ENST00000494943 DNTTIP2Q5QJE6 756 aaKnown RBP7.78□□□□□ -1.16
PHC3-214ENST00000494943 CFAP44Q96MT7 982 aa7.78□□□□□ -1.16
PHC3-214ENST00000494943 EIF3AQ14152 1382 aaKnown RBP7.78□□□□□ -1.16
PHC3-214ENST00000494943 TAF7LQ5H9L4 462 aa7.78□□□□□ -1.16
PHC3-214ENST00000494943 RALBP1Q15311 655 aa7.77□□□□□ -1.17
PHC3-214ENST00000494943 MAPK8IP3Q9UPT6 1336 aa7.77□□□□□ -1.17
PHC3-214ENST00000494943 ARHGAP35Q9NRY4 1499 aa7.77□□□□□ -1.17
PHC3-214ENST00000494943 CCDC173Q0VFZ6 552 aa7.77□□□□□ -1.17
PHC3-214ENST00000494943 HSPA5P11021 654 aaKnown RBP7.77□□□□□ -1.17
PHC3-214ENST00000494943 SMAP1Q8IYB5 467 aaPredicted RBP7.77□□□□□ -1.17
PHC3-214ENST00000494943 SIN3AQ96ST3 1273 aa7.76□□□□□ -1.17
PHC3-214ENST00000494943 TSPYL1Q9H0U9 437 aa7.76□□□□□ -1.17
PHC3-214ENST00000494943 WDR97A6NE52 1622 aa7.75□□□□□ -1.17
PHC3-214ENST00000494943 CCDC66A2RUB6 948 aa7.75□□□□□ -1.17
PHC3-214ENST00000494943 PDIA4P13667 645 aaKnown RBP7.75□□□□□ -1.17
PHC3-214ENST00000494943 TERF1P54274 439 aa7.75□□□□□ -1.17
PHC3-214ENST00000494943 RBM10P98175 930 aaKnown RBP7.75□□□□□ -1.17
PHC3-214ENST00000494943 KIAA2012Q0VF49 1180 aa7.75□□□□□ -1.17
PHC3-214ENST00000494943 ERICH3Q5RHP9 1530 aa7.75□□□□□ -1.17
PHC3-214ENST00000494943 HIRIP3Q9BW71 556 aaPredicted RBP7.75□□□□□ -1.17
PHC3-214ENST00000494943 PRKRIP1Q9H875 184 aaPredicted RBP7.75□□□□□ -1.17
PHC3-214ENST00000494943 CADPSQ9ULU8 1353 aa7.74□□□□□ -1.17
PHC3-214ENST00000494943 WDR43Q15061 677 aaKnown RBP eCLIP7.73□□□□□ -1.17
PHC3-214ENST00000494943 CHMP5Q9NZZ3 219 aa7.73□□□□□ -1.17
PHC3-214ENST00000494943 ESPNB1AK53 854 aa7.73□□□□□ -1.17
PHC3-214ENST00000494943 AAMPQ13685 434 aa7.73□□□□□ -1.17
PHC3-214ENST00000494943 SYNJ1O43426 1573 aa7.73□□□□□ -1.17
PHC3-214ENST00000494943 HSP90AB1P08238 724 aaKnown RBP7.73□□□□□ -1.17
PHC3-214ENST00000494943 FMN1Q68DA7 1419 aa7.72□□□□□ -1.17
PHC3-214ENST00000494943 KIF15Q9NS87 1388 aa7.72□□□□□ -1.17
PHC3-214ENST00000494943 MRC2Q9UBG0 1479 aa7.71□□□□□ -1.17
PHC3-214ENST00000494943 HMGN5P82970 282 aaKnown RBP7.71□□□□□ -1.17
PHC3-214ENST00000494943 GTPBP4Q9BZE4 634 aaKnown RBP7.71□□□□□ -1.17
PHC3-214ENST00000494943 TNNT3P45378 269 aaPredicted RBP7.71□□□□□ -1.18
PHC3-214ENST00000494943 KIF27Q86VH2 1401 aa7.71□□□□□ -1.18
PHC3-214ENST00000494943 PMFBP1Q8TBY8 1022 aa7.71□□□□□ -1.18
PHC3-214ENST00000494943 SYAP1Q96A49 352 aaPredicted RBP7.71□□□□□ -1.18
PHC3-214ENST00000494943 CCDC39Q9UFE4 941 aa7.71□□□□□ -1.18
PHC3-214ENST00000494943 LETM1O95202 739 aaPredicted RBP7.71□□□□□ -1.18
PHC3-214ENST00000494943 FAM13BQ9NYF5 915 aa7.71□□□□□ -1.18
PHC3-214ENST00000494943 TARBP1Q13395 1621 aaKnown RBP7.7□□□□□ -1.18
PHC3-214ENST00000494943 PLEKHG5O94827 1062 aa7.7□□□□□ -1.18
PHC3-214ENST00000494943 PLEKHH2Q8IVE3 1493 aa7.7□□□□□ -1.18
PHC3-214ENST00000494943 FRAT2O75474 233 aaPredicted RBP7.7□□□□□ -1.18
PHC3-214ENST00000494943 FGD1P98174 961 aa7.7□□□□□ -1.18
PHC3-214ENST00000494943 BIVM-ERCC5R4GMW8 1640 aa7.7□□□□□ -1.18
PHC3-214ENST00000494943 RGS3P49796 1198 aa7.7□□□□□ -1.18
PHC3-214ENST00000494943 KIAA1211Q6ZU35 1233 aa7.7□□□□□ -1.18
PHC3-214ENST00000494943 ZNF771Q7L3S4 317 aaPredicted RBP7.7□□□□□ -1.18
PHC3-214ENST00000494943 MAP3K1Q13233 1512 aa7.69□□□□□ -1.18
PHC3-214ENST00000494943 URB2Q14146 1524 aaKnown RBP7.69□□□□□ -1.18
PHC3-214ENST00000494943 CCDC7Q96M83 1385 aa7.69□□□□□ -1.18
PHC3-214ENST00000494943 DYNC1I1O14576 645 aa7.69□□□□□ -1.18
PHC3-214ENST00000494943 EXOC6Q8TAG9 804 aa7.69□□□□□ -1.18
PHC3-214ENST00000494943 MCM5P33992 734 aa7.69□□□□□ -1.18
PHC3-214ENST00000494943 GRPEL1Q9HAV7 217 aa7.69□□□□□ -1.18
PHC3-214ENST00000494943 UACAQ9BZF9 1416 aa7.69□□□□□ -1.18
PHC3-214ENST00000494943 MYBBP1AQ9BQG0 1328 aaKnown RBP7.69□□□□□ -1.18
PHC3-214ENST00000494943 RUSC2Q8N2Y8 1516 aa7.69□□□□□ -1.18
PHC3-214ENST00000494943 CHMP4BQ9H444 224 aaKnown RBP7.68□□□□□ -1.18
PHC3-214ENST00000494943 NINLQ9Y2I6 1382 aa7.68□□□□□ -1.18
PHC3-214ENST00000494943 PHF14O94880 888 aa7.68□□□□□ -1.18
PHC3-214ENST00000494943 ZSCAN30Q86W11 494 aa7.68□□□□□ -1.18
PHC3-214ENST00000494943 PDS5BQ9NTI5 1447 aa7.68□□□□□ -1.18
PHC3-214ENST00000494943 BRD4O60885 1362 aaPredicted RBP7.68□□□□□ -1.18
PHC3-214ENST00000494943 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.68□□□□□ -1.18
PHC3-214ENST00000494943 CCDC18Q5T9S5 1454 aa7.68□□□□□ -1.18
PHC3-214ENST00000494943 SLKQ9H2G2 1235 aaPredicted RBP7.68□□□□□ -1.18
PHC3-214ENST00000494943 MTUS2Q5JR59 1369 aa7.67□□□□□ -1.18
PHC3-214ENST00000494943 CALRP27797 417 aaKnown RBP7.67□□□□□ -1.18
PHC3-214ENST00000494943 GZF1Q9H116 711 aaPredicted RBP7.67□□□□□ -1.18
PHC3-214ENST00000494943 UTP14CQ5TAP6 766 aaKnown RBP7.67□□□□□ -1.18
PHC3-214ENST00000494943 TPM3P06753 285 aa7.67□□□□□ -1.18
PHC3-214ENST00000494943 GOLGA6L6A8MZA4 724 aa7.66□□□□□ -1.18
PHC3-214ENST00000494943 KIF20AO95235 890 aa7.66□□□□□ -1.18
PHC3-214ENST00000494943 KIF3AQ9Y496 699 aa7.66□□□□□ -1.18
PHC3-214ENST00000494943 TRAK2O60296 914 aa7.66□□□□□ -1.18
PHC3-214ENST00000494943 SASS6Q6UVJ0 657 aa7.66□□□□□ -1.18
PHC3-214ENST00000494943 GOLGA6L1Q8N7Z2 621 aa7.66□□□□□ -1.18
PHC3-214ENST00000494943 AKNAQ7Z591 1439 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms