RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 SCAPERQ9BY12 1400 aa18.4■□□□□ 0.54
SND1-215ENST00000492772 KIF14Q15058 1648 aa18.38■□□□□ 0.53
SND1-215ENST00000492772 C9orf84Q5VXU9 1444 aa18.37■□□□□ 0.53
SND1-215ENST00000492772 ARHGEF12Q9NZN5 1544 aa18.37■□□□□ 0.53
SND1-215ENST00000492772 ATP10AO60312 1499 aa18.36■□□□□ 0.53
SND1-215ENST00000492772 PREX1Q8TCU6 1659 aa18.36■□□□□ 0.53
SND1-215ENST00000492772 HSPA2P54652 639 aa18.34■□□□□ 0.53
SND1-215ENST00000492772 ZNF518AQ6AHZ1 1483 aa18.33■□□□□ 0.53
SND1-215ENST00000492772 PLPPR3Q6T4P5 718 aa18.33■□□□□ 0.52
SND1-215ENST00000492772 ARHGAP35Q9NRY4 1499 aa18.33■□□□□ 0.52
SND1-215ENST00000492772 MLECQ14165 292 aa18.32■□□□□ 0.52
SND1-215ENST00000492772 EFCAB2Q5VUJ9 269 aa18.32■□□□□ 0.52
SND1-215ENST00000492772 CDK11AQ9UQ88 783 aaPredicted RBP18.32■□□□□ 0.52
SND1-215ENST00000492772 KDM5CP41229 1560 aa18.32■□□□□ 0.52
SND1-215ENST00000492772 ARHGAP5Q13017 1502 aa18.3■□□□□ 0.52
SND1-215ENST00000492772 CLIP1P30622 1438 aa18.3■□□□□ 0.52
SND1-215ENST00000492772 TROQ12816 1431 aaPredicted RBP18.3■□□□□ 0.52
SND1-215ENST00000492772 ATP1B4Q9UN42 357 aaPredicted RBP18.28■□□□□ 0.52
SND1-215ENST00000492772 REREQ9P2R6 1566 aa18.28■□□□□ 0.52
SND1-215ENST00000492772 LRRIQ1Q96JM4 1722 aa18.27■□□□□ 0.52
SND1-215ENST00000492772 UBTFP17480 764 aaKnown RBP18.27■□□□□ 0.52
SND1-215ENST00000492772 DIP2CQ9Y2E4 1556 aa18.26■□□□□ 0.51
SND1-215ENST00000492772 PREX2Q70Z35 1606 aa18.24■□□□□ 0.51
SND1-215ENST00000492772 CDC42BPBQ9Y5S2 1711 aa18.24■□□□□ 0.51
SND1-215ENST00000492772 CERKQ8TCT0 537 aa18.24■□□□□ 0.51
SND1-215ENST00000492772 ABCA6Q8N139 1617 aa18.23■□□□□ 0.51
SND1-215ENST00000492772 UHRF1BP1Q6BDS2 1440 aa18.22■□□□□ 0.51
SND1-215ENST00000492772 MLH3Q9UHC1 1453 aa18.21■□□□□ 0.51
SND1-215ENST00000492772 ABCC1P33527 1531 aa18.21■□□□□ 0.51
SND1-215ENST00000492772 ITSN2Q9NZM3 1697 aa18.21■□□□□ 0.51
SND1-215ENST00000492772 CCDC18Q5T9S5 1454 aa18.2■□□□□ 0.5
SND1-215ENST00000492772 STRCQ7RTU9 1775 aa18.2■□□□□ 0.5
SND1-215ENST00000492772 EHMT2Q96KQ7 1210 aa18.19■□□□□ 0.5
SND1-215ENST00000492772 SETD1BQ9UPS6 1966 aaKnown RBP18.19■□□□□ 0.5
SND1-215ENST00000492772 C3P01024 1663 aa18.18■□□□□ 0.5
SND1-215ENST00000492772 AGLP35573 1532 aa18.18■□□□□ 0.5
SND1-215ENST00000492772 AFAP1Q8N556 730 aa18.18■□□□□ 0.5
SND1-215ENST00000492772 CEBPAP49715 358 aaPredicted RBP18.17■□□□□ 0.5
SND1-215ENST00000492772 MYT1LQ9UL68 1186 aa18.17■□□□□ 0.5
SND1-215ENST00000492772 DMRT2Q9Y5R5 561 aa18.17■□□□□ 0.5
SND1-215ENST00000492772 CASKIN1Q8WXD9 1431 aa18.15■□□□□ 0.5
SND1-215ENST00000492772 CDC42BPAQ5VT25 1732 aa18.15■□□□□ 0.5
SND1-215ENST00000492772 KIDINS220Q9ULH0 1771 aa18.13■□□□□ 0.49
SND1-215ENST00000492772 TRAPPC8Q9Y2L5 1435 aa18.13■□□□□ 0.49
SND1-215ENST00000492772 CNTLNQ9NXG0 1405 aa18.12■□□□□ 0.49
SND1-215ENST00000492772 FYCO1Q9BQS8 1478 aa18.11■□□□□ 0.49
SND1-215ENST00000492772 MROH2AA6NES4 1674 aa18.1■□□□□ 0.49
SND1-215ENST00000492772 PTPRTO14522 1441 aa18.1■□□□□ 0.49
SND1-215ENST00000492772 ESF1Q9H501 851 aaKnown RBP18.1■□□□□ 0.49
SND1-215ENST00000492772 SAMD9LQ8IVG5 1584 aa18.08■□□□□ 0.49
SND1-215ENST00000492772 CHIC1Q5VXU3 224 aa18.06■□□□□ 0.48
SND1-215ENST00000492772 SYCP2Q9BX26 1530 aa18.05■□□□□ 0.48
SND1-215ENST00000492772 NPATQ14207 1427 aa18.04■□□□□ 0.48
SND1-215ENST00000492772 NCOA1Q15788 1441 aa18.04■□□□□ 0.48
SND1-215ENST00000492772 IQSEC2Q5JU85 1478 aa18.03■□□□□ 0.48
SND1-215ENST00000492772 LTBP4Q8N2S1 1624 aa18.02■□□□□ 0.48
SND1-215ENST00000492772 INO80Q9ULG1 1556 aaPredicted RBP18.02■□□□□ 0.48
SND1-215ENST00000492772 ATP7AQ04656 1500 aa18.02■□□□□ 0.47
SND1-215ENST00000492772 SUPT6HQ7KZ85 1726 aaKnown RBP18.01■□□□□ 0.47
SND1-215ENST00000492772 PLXNC1O60486 1568 aa18.01■□□□□ 0.47
SND1-215ENST00000492772 PLEKHH2Q8IVE3 1493 aa18.01■□□□□ 0.47
SND1-215ENST00000492772 ZNF142P52746 1687 aaPredicted RBP18■□□□□ 0.47
SND1-215ENST00000492772 GPATCH8Q9UKJ3 1502 aaKnown RBP18■□□□□ 0.47
SND1-215ENST00000492772 CAMSAP1Q5T5Y3 1602 aa17.99■□□□□ 0.47
SND1-215ENST00000492772 DISP3Q9P2K9 1392 aa17.99■□□□□ 0.47
SND1-215ENST00000492772 CLTCQ00610 1675 aaKnown RBP17.99■□□□□ 0.47
SND1-215ENST00000492772 SPAG9O60271 1321 aaKnown RBP17.98■□□□□ 0.47
SND1-215ENST00000492772 MYO3AQ8NEV4 1616 aa17.98■□□□□ 0.47
SND1-215ENST00000492772 SPATA31D1Q6ZQQ2 1576 aa17.98■□□□□ 0.47
SND1-215ENST00000492772 KIAA1107Q9UPP5 1409 aa17.98■□□□□ 0.47
SND1-215ENST00000492772 ZNF777Q9ULD5 760 aaPredicted RBP17.97■□□□□ 0.47
SND1-215ENST00000492772 ADGBQ8N7X0 1667 aa17.96■□□□□ 0.47
SND1-215ENST00000492772 A2MP01023 1474 aa17.95■□□□□ 0.46
SND1-215ENST00000492772 ZMYM3Q14202 1370 aa17.94■□□□□ 0.46
SND1-215ENST00000492772 PLA2R1Q13018 1463 aa17.94■□□□□ 0.46
SND1-215ENST00000492772 CEP170BQ9Y4F5 1589 aaPredicted RBP17.93■□□□□ 0.46
SND1-215ENST00000492772 CCNB3Q8WWL7 1395 aa17.92■□□□□ 0.46
SND1-215ENST00000492772 HNRNPMP52272 730 aaKnown RBP eCLIP17.92■□□□□ 0.461e-7■□□□□ 10.5
SND1-215ENST00000492772 CFDP1Q9UEE9 299 aaPredicted RBP17.91■□□□□ 0.46
SND1-215ENST00000492772 MTUS2Q5JR59 1369 aa17.9■□□□□ 0.46
SND1-215ENST00000492772 PTPRKQ15262 1439 aa17.89■□□□□ 0.46
SND1-215ENST00000492772 EHBP1L1Q8N3D4 1523 aa17.89■□□□□ 0.45
SND1-215ENST00000492772 TIAM1Q13009 1591 aa17.89■□□□□ 0.45
SND1-215ENST00000492772 TCOF1Q13428 1488 aaKnown RBP17.88■□□□□ 0.45
SND1-215ENST00000492772 SOCS7O14512 581 aa17.87■□□□□ 0.45
SND1-215ENST00000492772 ILDR2Q71H61 639 aa17.87■□□□□ 0.45
SND1-215ENST00000492772 PKD2Q13563 968 aa17.86■□□□□ 0.45
SND1-215ENST00000492772 PPP6R1Q9UPN7 881 aa17.86■□□□□ 0.45
SND1-215ENST00000492772 NCKAP5LQ9HCH0 1330 aa17.84■□□□□ 0.45
SND1-215ENST00000492772 FAM135AQ9P2D6 1515 aa17.83■□□□□ 0.45
SND1-215ENST00000492772 RTEL1-TNFRSF6BF6WH68 1400 aa17.83■□□□□ 0.45
SND1-215ENST00000492772 ZNF335Q9H4Z2 1342 aaPredicted RBP17.83■□□□□ 0.44
SND1-215ENST00000492772 GGT6Q6P531 493 aa17.83■□□□□ 0.44
SND1-215ENST00000492772 A2ML1A8K2U0 1454 aa17.82■□□□□ 0.44
SND1-215ENST00000492772 MBD5Q9P267 1494 aa17.82■□□□□ 0.44
SND1-215ENST00000492772 POLR1AO95602 1720 aaPredicted RBP17.82■□□□□ 0.44
SND1-215ENST00000492772 DNMT1P26358 1616 aaKnown RBP17.81■□□□□ 0.44
SND1-215ENST00000492772 CEP162Q5TB80 1403 aa17.81■□□□□ 0.44
SND1-215ENST00000492772 KDM5DQ9BY66 1539 aa17.79■□□□□ 0.44
SND1-215ENST00000492772 UBAP1LF5GYI3 381 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms