RNA–Protein interactions for RNA: ENST00000491734.6

EXD3-212, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

TSL 1 (best)

Gene EXD3, Length 2,176 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-212ENST00000491734 ZNF644Q9H582 1327 aaPredicted RBP25.95■■□□□ 1.75
EXD3-212ENST00000491734 ABCC2Q92887 1545 aa25.95■■□□□ 1.74
EXD3-212ENST00000491734 PLEKHD1A6NEE1 506 aa25.94■■□□□ 1.74
EXD3-212ENST00000491734 GPATCH8Q9UKJ3 1502 aaKnown RBP25.92■■□□□ 1.74
EXD3-212ENST00000491734 OSCARQ8IYS5 282 aa25.91■■□□□ 1.74
EXD3-212ENST00000491734 ABCC10Q5T3U5 1492 aa25.9■■□□□ 1.74
EXD3-212ENST00000491734 CDC42BPAQ5VT25 1732 aa25.88■■□□□ 1.73
EXD3-212ENST00000491734 DNMT1P26358 1616 aaKnown RBP25.88■■□□□ 1.73
EXD3-212ENST00000491734 AKNAQ7Z591 1439 aa25.87■■□□□ 1.73
EXD3-212ENST00000491734 UHRF1BP1LA0JNW5 1464 aa25.87■■□□□ 1.73
EXD3-212ENST00000491734 GCC2Q8IWJ2 1684 aa25.86■■□□□ 1.73
EXD3-212ENST00000491734 DAPK1P53355 1430 aa25.86■■□□□ 1.73
EXD3-212ENST00000491734 ABCC5O15440 1437 aa25.85■■□□□ 1.73
EXD3-212ENST00000491734 CFDP1Q9UEE9 299 aaPredicted RBP25.84■■□□□ 1.73
EXD3-212ENST00000491734 SUPT16HQ9Y5B9 1047 aaKnown RBP25.83■■□□□ 1.73
EXD3-212ENST00000491734 KDM6BO15054 1643 aa25.83■■□□□ 1.73
EXD3-212ENST00000491734 CAMSAP2Q08AD1 1489 aa25.83■■□□□ 1.73
EXD3-212ENST00000491734 ZNF777Q9ULD5 760 aaPredicted RBP25.79■■□□□ 1.72
EXD3-212ENST00000491734 ZCCHC11Q5TAX3 1644 aaKnown RBP25.78■■□□□ 1.72
EXD3-212ENST00000491734 KDM5BQ9UGL1 1544 aa25.78■■□□□ 1.72
EXD3-212ENST00000491734 TRIM52Q96A61 297 aa25.78■■□□□ 1.72
EXD3-212ENST00000491734 TIMELESSQ9UNS1 1208 aa25.76■■□□□ 1.71
EXD3-212ENST00000491734 ROCK1Q13464 1354 aa25.76■■□□□ 1.71
EXD3-212ENST00000491734 CROCC2H7BZ55 1655 aa25.74■■□□□ 1.71
EXD3-212ENST00000491734 PREX2Q70Z35 1606 aa25.73■■□□□ 1.71
EXD3-212ENST00000491734 DENND4BO75064 1496 aaPredicted RBP25.72■■□□□ 1.71
EXD3-212ENST00000491734 CDC42BPBQ9Y5S2 1711 aa25.72■■□□□ 1.71
EXD3-212ENST00000491734 PPP1R15AO75807 674 aaPredicted RBP25.71■■□□□ 1.71
EXD3-212ENST00000491734 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.7■■□□□ 1.7
EXD3-212ENST00000491734 ADGBQ8N7X0 1667 aa25.69■■□□□ 1.7
EXD3-212ENST00000491734 TTC37Q6PGP7 1564 aa25.69■■□□□ 1.7
EXD3-212ENST00000491734 TONSLQ96HA7 1378 aa25.67■■□□□ 1.7
EXD3-212ENST00000491734 MPHOSPH9Q99550 1183 aa25.67■■□□□ 1.7
EXD3-212ENST00000491734 ADGRL2O95490 1459 aa25.65■■□□□ 1.7
EXD3-212ENST00000491734 MYO5CQ9NQX4 1742 aa25.63■■□□□ 1.69
EXD3-212ENST00000491734 SAMD9LQ8IVG5 1584 aa25.63■■□□□ 1.69
EXD3-212ENST00000491734 ARHGEF5Q12774 1597 aa25.62■■□□□ 1.69
EXD3-212ENST00000491734 FOXD1Q16676 465 aa25.62■■□□□ 1.69
EXD3-212ENST00000491734 SHANK2Q9UPX8 1470 aa25.61■■□□□ 1.69
EXD3-212ENST00000491734 NCOA1Q15788 1441 aa25.61■■□□□ 1.69
EXD3-212ENST00000491734 MBD5Q9P267 1494 aa25.58■■□□□ 1.69
EXD3-212ENST00000491734 TSHZ2Q9NRE2 1034 aa25.56■■□□□ 1.68
EXD3-212ENST00000491734 ARHGAP5Q13017 1502 aa25.55■■□□□ 1.68
EXD3-212ENST00000491734 HNRNPMP52272 730 aaKnown RBP eCLIP25.55■■□□□ 1.68
EXD3-212ENST00000491734 ANKRD30AQ9BXX3 1397 aa25.53■■□□□ 1.68
EXD3-212ENST00000491734 KCNH8Q96L42 1107 aa25.52■■□□□ 1.68
EXD3-212ENST00000491734 HIRIP3Q9BW71 556 aaPredicted RBP25.52■■□□□ 1.68
EXD3-212ENST00000491734 C9orf84Q5VXU9 1444 aa25.52■■□□□ 1.68
EXD3-212ENST00000491734 WDR7Q9Y4E6 1490 aa25.51■■□□□ 1.67
EXD3-212ENST00000491734 PLCH2O75038 1416 aa25.51■■□□□ 1.67
EXD3-212ENST00000491734 SLC4A1APQ9BWU0 796 aaKnown RBP25.51■■□□□ 1.67
EXD3-212ENST00000491734 CCDC141Q6ZP82 1450 aa25.5■■□□□ 1.67
EXD3-212ENST00000491734 SYCP2Q9BX26 1530 aa25.48■■□□□ 1.67
EXD3-212ENST00000491734 RSPH4AQ5TD94 716 aa25.48■■□□□ 1.67
EXD3-212ENST00000491734 PLEKHH2Q8IVE3 1493 aa25.47■■□□□ 1.67
EXD3-212ENST00000491734 ANKRD30BQ9BXX2 1392 aa25.47■■□□□ 1.67
EXD3-212ENST00000491734 KIAA1107Q9UPP5 1409 aa25.47■■□□□ 1.67
EXD3-212ENST00000491734 ARAP3Q8WWN8 1544 aa25.47■■□□□ 1.67
EXD3-212ENST00000491734 TSPY4P0CV99 314 aa25.46■■□□□ 1.67
EXD3-212ENST00000491734 TSPY10P0CW01 314 aa25.46■■□□□ 1.67
EXD3-212ENST00000491734 PZPP20742 1482 aa25.46■■□□□ 1.67
EXD3-212ENST00000491734 MAST1Q9Y2H9 1570 aa25.45■■□□□ 1.66
EXD3-212ENST00000491734 ANKRD50Q9ULJ7 1429 aa25.44■■□□□ 1.66
EXD3-212ENST00000491734 ABCA9Q8IUA7 1624 aa25.43■■□□□ 1.66
EXD3-212ENST00000491734 ASXL2Q76L83 1435 aa25.41■■□□□ 1.66
EXD3-212ENST00000491734 L3MBTL2Q969R5 705 aa25.41■■□□□ 1.66
EXD3-212ENST00000491734 ANP32EQ9BTT0 268 aa25.4■■□□□ 1.66
EXD3-212ENST00000491734 RIMBP3CA6NJZ7 1639 aa25.39■■□□□ 1.66
EXD3-212ENST00000491734 RIMBP3BA6NNM3 1639 aa25.39■■□□□ 1.66
EXD3-212ENST00000491734 RIMBP3Q9UFD9 1639 aa25.39■■□□□ 1.66
EXD3-212ENST00000491734 ABCC1P33527 1531 aa25.39■■□□□ 1.66
EXD3-212ENST00000491734 DDX10Q13206 875 aaKnown RBP25.39■■□□□ 1.65
EXD3-212ENST00000491734 ARHGEF12Q9NZN5 1544 aa25.39■■□□□ 1.65
EXD3-212ENST00000491734 EFCAB2Q5VUJ9 269 aa25.38■■□□□ 1.65
EXD3-212ENST00000491734 KIF15Q9NS87 1388 aa25.37■■□□□ 1.65
EXD3-212ENST00000491734 RPRD2Q5VT52 1461 aaKnown RBP25.36■■□□□ 1.65
EXD3-212ENST00000491734 PKD2Q13563 968 aa25.34■■□□□ 1.65
EXD3-212ENST00000491734 PLXNC1O60486 1568 aa25.34■■□□□ 1.65
EXD3-212ENST00000491734 NUP155O75694 1391 aa25.32■■□□□ 1.64
EXD3-212ENST00000491734 NPM1P06748 294 aaKnown RBP eCLIP25.31■■□□□ 1.64
EXD3-212ENST00000491734 KDM5DQ9BY66 1539 aa25.3■■□□□ 1.64
EXD3-212ENST00000491734 TEX14Q8IWB6 1497 aa25.28■■□□□ 1.64
EXD3-212ENST00000491734 FANCAO15360 1455 aa25.27■■□□□ 1.64
EXD3-212ENST00000491734 NBPF8Q3BBV2 869 aa25.26■■□□□ 1.63
EXD3-212ENST00000491734 TRAPPC8Q9Y2L5 1435 aa25.25■■□□□ 1.63
EXD3-212ENST00000491734 CCER2I3L3R5 266 aa25.25■■□□□ 1.63
EXD3-212ENST00000491734 HSPA5P11021 654 aaKnown RBP25.24■■□□□ 1.63
EXD3-212ENST00000491734 CYB5RLQ6IPT4 315 aa25.21■■□□□ 1.63
EXD3-212ENST00000491734 DUOX2Q9NRD8 1548 aa25.21■■□□□ 1.63
EXD3-212ENST00000491734 UNC13BO14795 1591 aa25.2■■□□□ 1.63
EXD3-212ENST00000491734 RTEL1-TNFRSF6BF6WH68 1400 aa25.19■■□□□ 1.62
EXD3-212ENST00000491734 FKBP8Q14318 412 aa25.18■■□□□ 1.62
EXD3-212ENST00000491734 ZFYVE16Q7Z3T8 1539 aa25.17■■□□□ 1.62
EXD3-212ENST00000491734 EIF4G2P78344 907 aaKnown RBP eCLIP25.17■■□□□ 1.622e-6■■■■■ 36
EXD3-212ENST00000491734 ADGRL1O94910 1474 aa25.16■■□□□ 1.62
EXD3-212ENST00000491734 ERBINQ96RT1 1412 aa25.16■■□□□ 1.62
EXD3-212ENST00000491734 INO80Q9ULG1 1556 aaPredicted RBP25.14■■□□□ 1.62
EXD3-212ENST00000491734 CFAP74Q9C0B2 1584 aa25.13■■□□□ 1.61
EXD3-212ENST00000491734 FAM135AQ9P2D6 1515 aa25.13■■□□□ 1.61
EXD3-212ENST00000491734 AFAP1Q8N556 730 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms