RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 EFCAB3Q8N7B9 438 aa10.54□□□□□ -0.72
R3HDM1-218ENST00000487294 TAOK2Q9UL54 1235 aa10.54□□□□□ -0.72
R3HDM1-218ENST00000487294 SPNS2Q8IVW8 549 aa10.52□□□□□ -0.73
R3HDM1-218ENST00000487294 HOXB3P14651 431 aaPredicted RBP10.5□□□□□ -0.73
R3HDM1-218ENST00000487294 MMRN1Q13201 1228 aa10.5□□□□□ -0.73
R3HDM1-218ENST00000487294 HS3ST6Q96QI5 342 aa10.5□□□□□ -0.73
R3HDM1-218ENST00000487294 BCL11BQ9C0K0 894 aaPredicted RBP10.5□□□□□ -0.73
R3HDM1-218ENST00000487294 SOX12O15370 315 aa10.49□□□□□ -0.73
R3HDM1-218ENST00000487294 STK25O00506 426 aa10.48□□□□□ -0.73
R3HDM1-218ENST00000487294 DOK7Q18PE1 504 aa10.48□□□□□ -0.73
R3HDM1-218ENST00000487294 STK24Q9Y6E0 443 aa10.48□□□□□ -0.73
R3HDM1-218ENST00000487294 FAM205CA6NFA0 338 aa10.47□□□□□ -0.73
R3HDM1-218ENST00000487294 ZNF710Q8N1W2 664 aa10.46□□□□□ -0.73
R3HDM1-218ENST00000487294 HOXB1P14653 301 aaPredicted RBP10.45□□□□□ -0.74
R3HDM1-218ENST00000487294 MICALL2Q8IY33 904 aa10.45□□□□□ -0.74
R3HDM1-218ENST00000487294 POTEB3A0JP26 581 aa10.44□□□□□ -0.74
R3HDM1-218ENST00000487294 POTEBQ6S5H4 581 aa10.44□□□□□ -0.74
R3HDM1-218ENST00000487294 RIMBP2O15034 1052 aa10.43□□□□□ -0.74
R3HDM1-218ENST00000487294 KRTAP3-3Q9BYR6 98 aa10.43□□□□□ -0.74
R3HDM1-218ENST00000487294 KRTAP3-2Q9BYR7 98 aa10.43□□□□□ -0.74
R3HDM1-218ENST00000487294 DNAJC5Q9H3Z4 198 aa10.43□□□□□ -0.74
R3HDM1-218ENST00000487294 CHGAP10645 457 aaKnown RBP10.41□□□□□ -0.74
R3HDM1-218ENST00000487294 HS6ST3Q8IZP7 471 aa10.41□□□□□ -0.74
R3HDM1-218ENST00000487294 MS4A4AQ96JQ5 239 aa10.41□□□□□ -0.74
R3HDM1-218ENST00000487294 ZSWIM6Q9HCJ5 1215 aa10.39□□□□□ -0.75
R3HDM1-218ENST00000487294 PHF8Q9UPP1 1060 aa10.39□□□□□ -0.75
R3HDM1-218ENST00000487294 TMEM92Q6UXU6 159 aa10.37□□□□□ -0.75
R3HDM1-218ENST00000487294 ERBB3P21860 1342 aa10.36□□□□□ -0.75
R3HDM1-218ENST00000487294 NLRP6P59044 892 aa10.36□□□□□ -0.75
R3HDM1-218ENST00000487294 MFRPQ9BY79 579 aa10.35□□□□□ -0.75
R3HDM1-218ENST00000487294 FBXO22Q8NEZ5 403 aa10.33□□□□□ -0.76
R3HDM1-218ENST00000487294 NCAPD3P42695 1498 aa10.3□□□□□ -0.76
R3HDM1-218ENST00000487294 NKX1-1Q15270 411 aaPredicted RBP10.3□□□□□ -0.76
R3HDM1-218ENST00000487294 VARS2Q5ST30 1063 aaKnown RBP10.29□□□□□ -0.76
R3HDM1-218ENST00000487294 CUX2O14529 1486 aa10.29□□□□□ -0.76
R3HDM1-218ENST00000487294 GPR153Q6NV75 609 aa10.28□□□□□ -0.76
R3HDM1-218ENST00000487294 ZNF687Q8N1G0 1237 aa10.24□□□□□ -0.77
R3HDM1-218ENST00000487294 PPP1R37O75864 691 aa10.21□□□□□ -0.77
R3HDM1-218ENST00000487294 ATAD2BQ9ULI0 1458 aa10.21□□□□□ -0.78
R3HDM1-218ENST00000487294 HMGXB3Q12766 1538 aa10.19□□□□□ -0.78
R3HDM1-218ENST00000487294 KIF3CO14782 793 aa10.19□□□□□ -0.78
R3HDM1-218ENST00000487294 ARSIQ5FYB1 569 aa10.19□□□□□ -0.78
R3HDM1-218ENST00000487294 GTPBP6O43824 516 aaPredicted RBP10.18□□□□□ -0.78
R3HDM1-218ENST00000487294 BBXQ8WY36 941 aaPredicted RBP10.18□□□□□ -0.78
R3HDM1-218ENST00000487294 RNF166Q96A37 237 aaPredicted RBP10.18□□□□□ -0.78
R3HDM1-218ENST00000487294 SMARCA2P51531 1590 aa10.18□□□□□ -0.78
R3HDM1-218ENST00000487294 PTGER2P43116 358 aa10.17□□□□□ -0.78
R3HDM1-218ENST00000487294 ERCC6Q03468 1493 aa10.17□□□□□ -0.78
R3HDM1-218ENST00000487294 ZNF316A6NFI3 1004 aaPredicted RBP10.16□□□□□ -0.78
R3HDM1-218ENST00000487294 C2orf72A6NCS6 295 aa10.15□□□□□ -0.78
R3HDM1-218ENST00000487294 SMARCA4P51532 1647 aa10.15□□□□□ -0.79
R3HDM1-218ENST00000487294 RYDENQ9NUL5 291 aaKnown RBP10.14□□□□□ -0.79
R3HDM1-218ENST00000487294 MYT1LQ9UL68 1186 aa10.14□□□□□ -0.79
R3HDM1-218ENST00000487294 SLC34A2O95436 690 aa10.12□□□□□ -0.79
R3HDM1-218ENST00000487294 KHSRPQ92945 711 aaKnown RBP eCLIP10.12□□□□□ -0.797e-8■■■■□ 22
R3HDM1-218ENST00000487294 PEG3Q9GZU2 1588 aa10.12□□□□□ -0.79
R3HDM1-218ENST00000487294 TMC2Q8TDI7 906 aa10.11□□□□□ -0.79
R3HDM1-218ENST00000487294 BAZ1AQ9NRL2 1556 aaPredicted RBP10.09□□□□□ -0.79
R3HDM1-218ENST00000487294 PBX2P40425 430 aa10.09□□□□□ -0.79
R3HDM1-218ENST00000487294 NESP48681 1621 aa10.08□□□□□ -0.8
R3HDM1-218ENST00000487294 BAZ1BQ9UIG0 1483 aaKnown RBP10.07□□□□□ -0.8
R3HDM1-218ENST00000487294 NUDT7P0C024 238 aa10.07□□□□□ -0.8
R3HDM1-218ENST00000487294 LSM11P83369 360 aaKnown RBP eCLIP10.07□□□□□ -0.8
R3HDM1-218ENST00000487294 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.07□□□□□ -0.8
R3HDM1-218ENST00000487294 PCDHGA4Q9Y5G9 962 aa10.07□□□□□ -0.8
R3HDM1-218ENST00000487294 THOC2Q8NI27 1593 aaKnown RBP10.05□□□□□ -0.8
R3HDM1-218ENST00000487294 LAMC3Q9Y6N6 1575 aa10.05□□□□□ -0.8
R3HDM1-218ENST00000487294 ANKRD13DQ6ZTN6 518 aa10.05□□□□□ -0.8
R3HDM1-218ENST00000487294 SPRYD3Q8NCJ5 442 aa10.05□□□□□ -0.8
R3HDM1-218ENST00000487294 LHX6Q9UPM6 363 aa10.03□□□□□ -0.8
R3HDM1-218ENST00000487294 PAXIP1Q6ZW49 1069 aaPredicted RBP10.02□□□□□ -0.81
R3HDM1-218ENST00000487294 PSDA5PKW4 1024 aaPredicted RBP10.01□□□□□ -0.81
R3HDM1-218ENST00000487294 CFAP44Q96MT7 982 aa10.01□□□□□ -0.81
R3HDM1-218ENST00000487294 PDS5BQ9NTI5 1447 aa9.99□□□□□ -0.81
R3HDM1-218ENST00000487294 MROH2BQ7Z745 1585 aa9.97□□□□□ -0.81
R3HDM1-218ENST00000487294 PTCD2Q8WV60 388 aaKnown RBP9.97□□□□□ -0.81
R3HDM1-218ENST00000487294 FOXK1P85037 733 aa9.96□□□□□ -0.82
R3HDM1-218ENST00000487294 POTEEQ6S8J3 1075 aa9.96□□□□□ -0.82
R3HDM1-218ENST00000487294 CADPS2Q86UW7 1296 aa9.96□□□□□ -0.82
R3HDM1-218ENST00000487294 GPHNQ9NQX3 736 aaPredicted RBP9.96□□□□□ -0.82
R3HDM1-218ENST00000487294 CRISPLD2Q9H0B8 497 aa9.95□□□□□ -0.82
R3HDM1-218ENST00000487294 KIF21AQ7Z4S6 1674 aa9.94□□□□□ -0.82
R3HDM1-218ENST00000487294 CADPSQ9ULU8 1353 aa9.94□□□□□ -0.82
R3HDM1-218ENST00000487294 NCKAP5LQ9HCH0 1330 aa9.94□□□□□ -0.82
R3HDM1-218ENST00000487294 KDM4FA0A1W2PPD8 638 aa9.94□□□□□ -0.82
R3HDM1-218ENST00000487294 ARHGAP33O14559 1287 aa9.93□□□□□ -0.82
R3HDM1-218ENST00000487294 AXIN2Q9Y2T1 843 aa9.93□□□□□ -0.82
R3HDM1-218ENST00000487294 PLPP6Q8IY26 295 aa9.92□□□□□ -0.82
R3HDM1-218ENST00000487294 PDE4AP27815 886 aa9.91□□□□□ -0.82
R3HDM1-218ENST00000487294 DSG2Q14126 1118 aa9.91□□□□□ -0.82
R3HDM1-218ENST00000487294 WDR62O43379 1518 aa9.91□□□□□ -0.82
R3HDM1-218ENST00000487294 TBC1D12O60347 775 aa9.9□□□□□ -0.82
R3HDM1-218ENST00000487294 ADGRD1Q6QNK2 874 aa9.9□□□□□ -0.82
R3HDM1-218ENST00000487294 MRC2Q9UBG0 1479 aa9.9□□□□□ -0.83
R3HDM1-218ENST00000487294 TK2O00142 265 aa9.89□□□□□ -0.83
R3HDM1-218ENST00000487294 PPP4R3BQ5MIZ7 849 aa9.88□□□□□ -0.83
R3HDM1-218ENST00000487294 LARP6Q9BRS8 491 aaKnown RBP9.88□□□□□ -0.83
R3HDM1-218ENST00000487294 HCSTQ9UBK5 93 aa9.86□□□□□ -0.83
R3HDM1-218ENST00000487294 PLCB2Q00722 1185 aa9.85□□□□□ -0.83
R3HDM1-218ENST00000487294 MFSD10Q14728 455 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms