RNA–Protein interactions for RNA: ENST00000481965.6

SEC22A-207, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3 BASIC

Gene SEC22A, Length 673 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-207ENST00000481965 RBM26Q5T8P6 1007 aaKnown RBP13.25□□□□□ -0.29
SEC22A-207ENST00000481965 DPY19L2Q6NUT2 758 aa13.25□□□□□ -0.29
SEC22A-207ENST00000481965 EMILIN3Q9NT22 766 aa13.25□□□□□ -0.29
SEC22A-207ENST00000481965 ERICH6Q7L0X2 663 aa13.24□□□□□ -0.29
SEC22A-207ENST00000481965 TRIM35Q9UPQ4 493 aa13.21□□□□□ -0.29
SEC22A-207ENST00000481965 DPYSL4O14531 572 aa13.2□□□□□ -0.3
SEC22A-207ENST00000481965 DSG2Q14126 1118 aa13.2□□□□□ -0.3
SEC22A-207ENST00000481965 GALR2O43603 387 aaPredicted RBP13.19□□□□□ -0.3
SEC22A-207ENST00000481965 MICALL2Q8IY33 904 aa13.18□□□□□ -0.3
SEC22A-207ENST00000481965 C14orf37Q86TY3 774 aa13.17□□□□□ -0.3
SEC22A-207ENST00000481965 PDCD7Q8N8D1 485 aaKnown RBP13.17□□□□□ -0.3
SEC22A-207ENST00000481965 PDIA6Q15084 440 aa13.16□□□□□ -0.3
SEC22A-207ENST00000481965 GPIHBP1Q8IV16 184 aa13.16□□□□□ -0.3
SEC22A-207ENST00000481965 FOXK1P85037 733 aa13.13□□□□□ -0.31
SEC22A-207ENST00000481965 AK7Q96M32 723 aa13.13□□□□□ -0.31
SEC22A-207ENST00000481965 SPDYE16A6NNV3 312 aaPredicted RBP13.11□□□□□ -0.31
SEC22A-207ENST00000481965 GPR37O15354 613 aa13.1□□□□□ -0.31
SEC22A-207ENST00000481965 GPBP1L1Q9HC44 474 aaPredicted RBP13.1□□□□□ -0.31
SEC22A-207ENST00000481965 TMEM121BQ9BXQ6 578 aaPredicted RBP13.09□□□□□ -0.31
SEC22A-207ENST00000481965 KIF3CO14782 793 aa13.08□□□□□ -0.32
SEC22A-207ENST00000481965 ATN1P54259 1190 aaPredicted RBP13.08□□□□□ -0.32
SEC22A-207ENST00000481965 IRX5P78411 483 aaPredicted RBP13.08□□□□□ -0.32
SEC22A-207ENST00000481965 TMC2Q8TDI7 906 aa13.07□□□□□ -0.32
SEC22A-207ENST00000481965 EVX2Q03828 476 aa13.06□□□□□ -0.32
SEC22A-207ENST00000481965 PLPP6Q8IY26 295 aa13.06□□□□□ -0.32
SEC22A-207ENST00000481965 C2orf72A6NCS6 295 aa13.05□□□□□ -0.32
SEC22A-207ENST00000481965 TRIM66O15016 1216 aa13.04□□□□□ -0.32
SEC22A-207ENST00000481965 KRI1Q8N9T8 703 aaKnown RBP13.04□□□□□ -0.32
SEC22A-207ENST00000481965 ATMINO43313 823 aaPredicted RBP13.02□□□□□ -0.33
SEC22A-207ENST00000481965 BOLA1Q9Y3E2 137 aa13.02□□□□□ -0.33
SEC22A-207ENST00000481965 PDE4DQ08499 809 aa13□□□□□ -0.33
SEC22A-207ENST00000481965 KDM4CQ9H3R0 1056 aa13□□□□□ -0.33
SEC22A-207ENST00000481965 OCEL1Q9H607 264 aa13□□□□□ -0.33
SEC22A-207ENST00000481965 ASTLQ6HA08 431 aaPredicted RBP12.99□□□□□ -0.33
SEC22A-207ENST00000481965 IER5LQ5T953 404 aa12.97□□□□□ -0.33
SEC22A-207ENST00000481965 TMEM92Q6UXU6 159 aa12.97□□□□□ -0.33
SEC22A-207ENST00000481965 IL27Q8NEV9 243 aa12.96□□□□□ -0.33
SEC22A-207ENST00000481965 ARXQ96QS3 562 aa12.96□□□□□ -0.33
SEC22A-207ENST00000481965 GRXCR2A6NFK2 248 aa12.95□□□□□ -0.34
SEC22A-207ENST00000481965 CLCN6P51797 869 aa12.94□□□□□ -0.34
SEC22A-207ENST00000481965 OSBPP22059 807 aa12.93□□□□□ -0.34
SEC22A-207ENST00000481965 HAX1O00165 279 aa12.92□□□□□ -0.34
SEC22A-207ENST00000481965 MAP3K9P80192 1104 aa12.92□□□□□ -0.34
SEC22A-207ENST00000481965 OXER1Q8TDS5 423 aa12.92□□□□□ -0.34
SEC22A-207ENST00000481965 UPF1Q92900 1129 aaKnown RBP eCLIP12.91□□□□□ -0.34
SEC22A-207ENST00000481965 MINK1Q8N4C8 1332 aaPredicted RBP12.88□□□□□ -0.35
SEC22A-207ENST00000481965 NUTM2FA1L443 756 aa12.88□□□□□ -0.35
SEC22A-207ENST00000481965 PTGER2P43116 358 aa12.88□□□□□ -0.35
SEC22A-207ENST00000481965 PRIM1P49642 420 aaKnown RBP12.88□□□□□ -0.35
SEC22A-207ENST00000481965 CCDC102AQ96A19 550 aa12.88□□□□□ -0.35
SEC22A-207ENST00000481965 PLCG2P16885 1265 aa12.87□□□□□ -0.35
SEC22A-207ENST00000481965 MAP2K5Q13163 448 aa12.87□□□□□ -0.35
SEC22A-207ENST00000481965 SUPT5HO00267 1087 aaKnown RBP12.86□□□□□ -0.35
SEC22A-207ENST00000481965 FAM117AQ9C073 453 aa12.86□□□□□ -0.35
SEC22A-207ENST00000481965 G3V3G9 751 aa12.85□□□□□ -0.35
SEC22A-207ENST00000481965 IRF6O14896 467 aa12.85□□□□□ -0.35
SEC22A-207ENST00000481965 FECHP22830 423 aa12.85□□□□□ -0.35
SEC22A-207ENST00000481965 COLQQ9Y215 455 aaPredicted RBP12.85□□□□□ -0.35
SEC22A-207ENST00000481965 PELP1Q8IZL8 1130 aaKnown RBP12.84□□□□□ -0.35
SEC22A-207ENST00000481965 DDX12PQ92771 950 aa12.84□□□□□ -0.35
SEC22A-207ENST00000481965 DAXXQ9UER7 740 aaPredicted RBP12.84□□□□□ -0.35
SEC22A-207ENST00000481965 GNPATO15228 680 aa12.83□□□□□ -0.36
SEC22A-207ENST00000481965 L3MBTL3Q96JM7 780 aaPredicted RBP12.83□□□□□ -0.36
SEC22A-207ENST00000481965 PLEKHG3A1L390 1219 aa12.82□□□□□ -0.36
SEC22A-207ENST00000481965 AMHR2Q16671 573 aa12.82□□□□□ -0.36
SEC22A-207ENST00000481965 PARP9Q8IXQ6 854 aa12.81□□□□□ -0.36
SEC22A-207ENST00000481965 HIC1Q14526 733 aa12.8□□□□□ -0.36
SEC22A-207ENST00000481965 POTEFA5A3E0 1075 aa12.79□□□□□ -0.36
SEC22A-207ENST00000481965 FCHSD2O94868 740 aa12.79□□□□□ -0.36
SEC22A-207ENST00000481965 EVI5O60447 810 aa12.78□□□□□ -0.36
SEC22A-207ENST00000481965 PTGDRQ13258 359 aa12.76□□□□□ -0.37
SEC22A-207ENST00000481965 ZNF316A6NFI3 1004 aaPredicted RBP12.75□□□□□ -0.37
SEC22A-207ENST00000481965 GABBR2O75899 941 aa12.75□□□□□ -0.37
SEC22A-207ENST00000481965 HOMEZQ8IX15 550 aa12.75□□□□□ -0.37
SEC22A-207ENST00000481965 TBC1D12O60347 775 aa12.74□□□□□ -0.37
SEC22A-207ENST00000481965 PTCD2Q8WV60 388 aaKnown RBP12.74□□□□□ -0.37
SEC22A-207ENST00000481965 SEC24BO95487 1268 aa12.71□□□□□ -0.37
SEC22A-207ENST00000481965 DDRGK1Q96HY6 314 aa12.71□□□□□ -0.37
SEC22A-207ENST00000481965 ANO8Q9HCE9 1232 aaPredicted RBP12.71□□□□□ -0.37
SEC22A-207ENST00000481965 ZMYND15Q9H091 742 aa12.7□□□□□ -0.38
SEC22A-207ENST00000481965 CDHR5Q9HBB8 845 aa12.69□□□□□ -0.38
SEC22A-207ENST00000481965 NPDC1Q9NQX5 325 aaPredicted RBP12.69□□□□□ -0.38
SEC22A-207ENST00000481965 REPIN1Q9BWE0 567 aaKnown RBP12.68□□□□□ -0.38
SEC22A-207ENST00000481965 SLC34A2O95436 690 aa12.67□□□□□ -0.38
SEC22A-207ENST00000481965 MS4A1P11836 297 aa12.65□□□□□ -0.38
SEC22A-207ENST00000481965 SLC39A7Q92504 469 aa12.65□□□□□ -0.38
SEC22A-207ENST00000481965 EN1Q05925 392 aaPredicted RBP12.64□□□□□ -0.39
SEC22A-207ENST00000481965 TTLL12Q14166 644 aaPredicted RBP12.64□□□□□ -0.39
SEC22A-207ENST00000481965 GIGYF2Q6Y7W6 1299 aaKnown RBP12.64□□□□□ -0.39
SEC22A-207ENST00000481965 DCBLD2Q96PD2 775 aa12.63□□□□□ -0.39
SEC22A-207ENST00000481965 TMUB1Q9BVT8 246 aa12.62□□□□□ -0.39
SEC22A-207ENST00000481965 PHF14O94880 888 aa12.61□□□□□ -0.39
SEC22A-207ENST00000481965 C7P10643 843 aa12.61□□□□□ -0.39
SEC22A-207ENST00000481965 PHOX2BQ99453 314 aa12.6□□□□□ -0.39
SEC22A-207ENST00000481965 RSPH6AQ9H0K4 717 aa12.6□□□□□ -0.39
SEC22A-207ENST00000481965 GOPCQ9HD26 462 aa12.6□□□□□ -0.39
SEC22A-207ENST00000481965 METRNQ9UJH8 293 aa12.6□□□□□ -0.39
SEC22A-207ENST00000481965 PCDHGA10Q9Y5H3 936 aa12.6□□□□□ -0.39
SEC22A-207ENST00000481965 C3orf67Q6ZVT6 689 aa12.59□□□□□ -0.39
SEC22A-207ENST00000481965 EPAS1Q99814 870 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms