RNA–Protein interactions for RNA: ENST00000477984.1

LINC00336-201, long intergenic non-protein coding RNA 336, humanhuman

TSL 2 BASIC

Gene LINC00336, Length 2,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00336-201ENST00000477984 ABCC5O15440 1437 aa24.69■■□□□ 1.54
LINC00336-201ENST00000477984 ATP10BO94823 1461 aa24.69■■□□□ 1.54
LINC00336-201ENST00000477984 GPATCH8Q9UKJ3 1502 aaKnown RBP24.69■■□□□ 1.54
LINC00336-201ENST00000477984 KIF14Q15058 1648 aa24.68■■□□□ 1.54
LINC00336-201ENST00000477984 SHROOM2Q13796 1616 aa24.68■■□□□ 1.54
LINC00336-201ENST00000477984 PTPRGP23470 1445 aa24.67■■□□□ 1.54
LINC00336-201ENST00000477984 CAMSAP2Q08AD1 1489 aa24.65■■□□□ 1.54
LINC00336-201ENST00000477984 ZNF644Q9H582 1327 aaPredicted RBP24.64■■□□□ 1.54
LINC00336-201ENST00000477984 KDM6BO15054 1643 aa24.64■■□□□ 1.54
LINC00336-201ENST00000477984 PLEKHD1A6NEE1 506 aa24.64■■□□□ 1.53
LINC00336-201ENST00000477984 CFDP1Q9UEE9 299 aaPredicted RBP24.62■■□□□ 1.53
LINC00336-201ENST00000477984 PPP1R15AO75807 674 aaPredicted RBP24.61■■□□□ 1.53
LINC00336-201ENST00000477984 ABCC10Q5T3U5 1492 aa24.6■■□□□ 1.53
LINC00336-201ENST00000477984 TONSLQ96HA7 1378 aa24.58■■□□□ 1.53
LINC00336-201ENST00000477984 DENND4BO75064 1496 aaPredicted RBP24.58■■□□□ 1.53
LINC00336-201ENST00000477984 TRIM52Q96A61 297 aa24.55■■□□□ 1.52
LINC00336-201ENST00000477984 ADGRL2O95490 1459 aa24.54■■□□□ 1.52
LINC00336-201ENST00000477984 CDC42BPAQ5VT25 1732 aa24.53■■□□□ 1.52
LINC00336-201ENST00000477984 CROCC2H7BZ55 1655 aa24.53■■□□□ 1.52
LINC00336-201ENST00000477984 ADGBQ8N7X0 1667 aa24.52■■□□□ 1.52
LINC00336-201ENST00000477984 MPHOSPH9Q99550 1183 aa24.51■■□□□ 1.51
LINC00336-201ENST00000477984 CLASP1Q7Z460 1538 aa24.5■■□□□ 1.51
LINC00336-201ENST00000477984 NCOA1Q15788 1441 aa24.49■■□□□ 1.51
LINC00336-201ENST00000477984 SUPT16HQ9Y5B9 1047 aaKnown RBP24.48■■□□□ 1.51
LINC00336-201ENST00000477984 OSCARQ8IYS5 282 aa24.47■■□□□ 1.51
LINC00336-201ENST00000477984 ZNF777Q9ULD5 760 aaPredicted RBP24.47■■□□□ 1.51
LINC00336-201ENST00000477984 ERCC6L2Q5T890 1561 aa24.46■■□□□ 1.51
LINC00336-201ENST00000477984 KDM5BQ9UGL1 1544 aa24.46■■□□□ 1.51
LINC00336-201ENST00000477984 SHANK2Q9UPX8 1470 aa24.46■■□□□ 1.51
LINC00336-201ENST00000477984 ABCC2Q92887 1545 aa24.45■■□□□ 1.5
LINC00336-201ENST00000477984 ANKRD30AQ9BXX3 1397 aa24.43■■□□□ 1.5
LINC00336-201ENST00000477984 ARHGEF5Q12774 1597 aa24.39■■□□□ 1.5
LINC00336-201ENST00000477984 PREX2Q70Z35 1606 aa24.39■■□□□ 1.49
LINC00336-201ENST00000477984 ANKRD30BQ9BXX2 1392 aa24.38■■□□□ 1.49
LINC00336-201ENST00000477984 C9orf84Q5VXU9 1444 aa24.36■■□□□ 1.49
LINC00336-201ENST00000477984 PZPP20742 1482 aa24.36■■□□□ 1.49
LINC00336-201ENST00000477984 UHRF1BP1LA0JNW5 1464 aa24.36■■□□□ 1.49
LINC00336-201ENST00000477984 MBD5Q9P267 1494 aa24.34■■□□□ 1.49
LINC00336-201ENST00000477984 SLC4A1APQ9BWU0 796 aaKnown RBP24.33■■□□□ 1.49
LINC00336-201ENST00000477984 CDC42BPBQ9Y5S2 1711 aa24.33■■□□□ 1.49
LINC00336-201ENST00000477984 SAMD9LQ8IVG5 1584 aa24.32■■□□□ 1.48
LINC00336-201ENST00000477984 RPRD2Q5VT52 1461 aaKnown RBP24.32■■□□□ 1.48
LINC00336-201ENST00000477984 ANKRD50Q9ULJ7 1429 aa24.32■■□□□ 1.48
LINC00336-201ENST00000477984 FOXD1Q16676 465 aa24.31■■□□□ 1.48
LINC00336-201ENST00000477984 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.3■■□□□ 1.48
LINC00336-201ENST00000477984 TSPY4P0CV99 314 aa24.3■■□□□ 1.48
LINC00336-201ENST00000477984 TSPY10P0CW01 314 aa24.3■■□□□ 1.48
LINC00336-201ENST00000477984 TTC37Q6PGP7 1564 aa24.29■■□□□ 1.48
LINC00336-201ENST00000477984 CCDC141Q6ZP82 1450 aa24.29■■□□□ 1.48
LINC00336-201ENST00000477984 RSPH4AQ5TD94 716 aa24.29■■□□□ 1.48
LINC00336-201ENST00000477984 HNRNPMP52272 730 aaKnown RBP eCLIP24.26■■□□□ 1.47
LINC00336-201ENST00000477984 ZCCHC11Q5TAX3 1644 aaKnown RBP24.25■■□□□ 1.47
LINC00336-201ENST00000477984 KIAA1107Q9UPP5 1409 aa24.25■■□□□ 1.47
LINC00336-201ENST00000477984 L3MBTL2Q969R5 705 aa24.24■■□□□ 1.47
LINC00336-201ENST00000477984 TEX14Q8IWB6 1497 aa24.24■■□□□ 1.47
LINC00336-201ENST00000477984 KDM5DQ9BY66 1539 aa24.23■■□□□ 1.47
LINC00336-201ENST00000477984 ARHGAP5Q13017 1502 aa24.23■■□□□ 1.47
LINC00336-201ENST00000477984 DDX10Q13206 875 aaKnown RBP24.22■■□□□ 1.47
LINC00336-201ENST00000477984 KIF15Q9NS87 1388 aa24.22■■□□□ 1.47
LINC00336-201ENST00000477984 PLEKHH2Q8IVE3 1493 aa24.22■■□□□ 1.47
LINC00336-201ENST00000477984 MYO5CQ9NQX4 1742 aa24.21■■□□□ 1.47
LINC00336-201ENST00000477984 MAST1Q9Y2H9 1570 aa24.21■■□□□ 1.47
LINC00336-201ENST00000477984 CCER2I3L3R5 266 aa24.21■■□□□ 1.47
LINC00336-201ENST00000477984 HIRIP3Q9BW71 556 aaPredicted RBP24.2■■□□□ 1.47
LINC00336-201ENST00000477984 SYCP2Q9BX26 1530 aa24.19■■□□□ 1.46
LINC00336-201ENST00000477984 DNAJC5Q9H3Z4 198 aa24.16■■□□□ 1.46
LINC00336-201ENST00000477984 PLCH2O75038 1416 aa24.16■■□□□ 1.46
LINC00336-201ENST00000477984 PKD2Q13563 968 aa24.16■■□□□ 1.46
LINC00336-201ENST00000477984 NUP155O75694 1391 aa24.15■■□□□ 1.46
LINC00336-201ENST00000477984 TSHZ2Q9NRE2 1034 aa24.14■■□□□ 1.45
LINC00336-201ENST00000477984 KCNH8Q96L42 1107 aa24.13■■□□□ 1.45
LINC00336-201ENST00000477984 HSPA5P11021 654 aaKnown RBP24.11■■□□□ 1.45
LINC00336-201ENST00000477984 PLXNC1O60486 1568 aa24.1■■□□□ 1.45
LINC00336-201ENST00000477984 EIF4G2P78344 907 aaKnown RBP eCLIP24.1■■□□□ 1.45
LINC00336-201ENST00000477984 NBPF8Q3BBV2 869 aa24.08■■□□□ 1.45
LINC00336-201ENST00000477984 ARAP3Q8WWN8 1544 aa24.07■■□□□ 1.44
LINC00336-201ENST00000477984 EFCAB2Q5VUJ9 269 aa24.07■■□□□ 1.44
LINC00336-201ENST00000477984 ARHGEF12Q9NZN5 1544 aa24.06■■□□□ 1.44
LINC00336-201ENST00000477984 ABCC1P33527 1531 aa24.05■■□□□ 1.44
LINC00336-201ENST00000477984 UNC13BO14795 1591 aa24.04■■□□□ 1.44
LINC00336-201ENST00000477984 FAM135AQ9P2D6 1515 aa24.03■■□□□ 1.44
LINC00336-201ENST00000477984 WDR7Q9Y4E6 1490 aa24.02■■□□□ 1.44
LINC00336-201ENST00000477984 ANP32CO43423 234 aa24.02■■□□□ 1.44
LINC00336-201ENST00000477984 RIMBP3CA6NJZ7 1639 aa24.01■■□□□ 1.43
LINC00336-201ENST00000477984 RIMBP3BA6NNM3 1639 aa24.01■■□□□ 1.43
LINC00336-201ENST00000477984 RIMBP3Q9UFD9 1639 aa24.01■■□□□ 1.43
LINC00336-201ENST00000477984 DUOX2Q9NRD8 1548 aa24.01■■□□□ 1.43
LINC00336-201ENST00000477984 WASHC2AQ641Q2 1341 aa23.99■■□□□ 1.43
LINC00336-201ENST00000477984 SPATA31E1Q6ZUB1 1445 aa23.98■■□□□ 1.43
LINC00336-201ENST00000477984 ERBINQ96RT1 1412 aa23.98■■□□□ 1.43
LINC00336-201ENST00000477984 UHRF1BP1Q6BDS2 1440 aa23.96■■□□□ 1.43
LINC00336-201ENST00000477984 CYB5RLQ6IPT4 315 aa23.95■■□□□ 1.42
LINC00336-201ENST00000477984 TRAPPC8Q9Y2L5 1435 aa23.94■■□□□ 1.42
LINC00336-201ENST00000477984 MAGI2Q86UL8 1455 aa23.94■■□□□ 1.42
LINC00336-201ENST00000477984 IQGAP3Q86VI3 1631 aa23.93■■□□□ 1.42
LINC00336-201ENST00000477984 ABCA9Q8IUA7 1624 aa23.92■■□□□ 1.42
LINC00336-201ENST00000477984 RTEL1-TNFRSF6BF6WH68 1400 aa23.92■■□□□ 1.42
LINC00336-201ENST00000477984 FKBP8Q14318 412 aa23.92■■□□□ 1.42
LINC00336-201ENST00000477984 CCDC7Q96M83 1385 aa23.91■■□□□ 1.42
LINC00336-201ENST00000477984 NEFLP07196 543 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms