RNA–Protein interactions for RNA: ENST00000477949.1

USP33-208, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 2

Gene USP33, Length 663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-208ENST00000477949 MRC2Q9UBG0 1479 aa13.36□□□□□ -0.27
USP33-208ENST00000477949 DPY19L2Q6NUT2 758 aa13.35□□□□□ -0.27
USP33-208ENST00000477949 CDAN1Q8IWY9 1227 aa13.34□□□□□ -0.27
USP33-208ENST00000477949 TMEM121BQ9BXQ6 578 aaPredicted RBP13.33□□□□□ -0.28
USP33-208ENST00000477949 G3V3G9 751 aa13.3□□□□□ -0.28
USP33-208ENST00000477949 BOLA1Q9Y3E2 137 aa13.29□□□□□ -0.28
USP33-208ENST00000477949 RIMBP3CA6NJZ7 1639 aa13.28□□□□□ -0.28
USP33-208ENST00000477949 RIMBP3BA6NNM3 1639 aa13.28□□□□□ -0.28
USP33-208ENST00000477949 RIMBP3Q9UFD9 1639 aa13.28□□□□□ -0.28
USP33-208ENST00000477949 EFCAB3Q8N7B9 438 aa13.28□□□□□ -0.28
USP33-208ENST00000477949 RIOK3O14730 519 aaKnown RBP13.27□□□□□ -0.29
USP33-208ENST00000477949 CADPSQ9ULU8 1353 aa13.25□□□□□ -0.29
USP33-208ENST00000477949 VGFO15240 615 aaPredicted RBP13.22□□□□□ -0.29
USP33-208ENST00000477949 RNF25Q96BH1 459 aaPredicted RBP13.22□□□□□ -0.29
USP33-208ENST00000477949 MARVELD3Q96A59 401 aa13.21□□□□□ -0.29
USP33-208ENST00000477949 SOX12O15370 315 aa13.2□□□□□ -0.3
USP33-208ENST00000477949 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.19□□□□□ -0.3
USP33-208ENST00000477949 ZFP91Q96JP5 570 aaPredicted RBP13.19□□□□□ -0.3
USP33-208ENST00000477949 MROH2BQ7Z745 1585 aa13.19□□□□□ -0.3
USP33-208ENST00000477949 ARHGEF11O15085 1522 aa13.18□□□□□ -0.3
USP33-208ENST00000477949 CEP164Q9UPV0 1460 aa13.16□□□□□ -0.3
USP33-208ENST00000477949 TAOK2Q9UL54 1235 aa13.14□□□□□ -0.31
USP33-208ENST00000477949 EMP3P54852 163 aa13.12□□□□□ -0.31
USP33-208ENST00000477949 FANCD2Q9BXW9 1451 aa13.11□□□□□ -0.31
USP33-208ENST00000477949 URB2Q14146 1524 aaKnown RBP13.09□□□□□ -0.31
USP33-208ENST00000477949 HOXB3P14651 431 aaPredicted RBP13.09□□□□□ -0.31
USP33-208ENST00000477949 MICALL2Q8IY33 904 aa13.08□□□□□ -0.32
USP33-208ENST00000477949 PHF8Q9UPP1 1060 aa13.08□□□□□ -0.32
USP33-208ENST00000477949 MS4A4AQ96JQ5 239 aa13.07□□□□□ -0.32
USP33-208ENST00000477949 FAM205CA6NFA0 338 aa13.05□□□□□ -0.32
USP33-208ENST00000477949 DOK7Q18PE1 504 aa13.05□□□□□ -0.32
USP33-208ENST00000477949 ZNF710Q8N1W2 664 aa13.05□□□□□ -0.32
USP33-208ENST00000477949 ARAP1Q96P48 1450 aa13.04□□□□□ -0.32
USP33-208ENST00000477949 BCL11BQ9C0K0 894 aaPredicted RBP13.04□□□□□ -0.32
USP33-208ENST00000477949 ECM2O94769 699 aaPredicted RBP13.03□□□□□ -0.32
USP33-208ENST00000477949 NLRP6P59044 892 aa13.03□□□□□ -0.32
USP33-208ENST00000477949 HS3ST6Q96QI5 342 aa13.03□□□□□ -0.32
USP33-208ENST00000477949 CFTRP13569 1480 aa13.03□□□□□ -0.32
USP33-208ENST00000477949 SPNS2Q8IVW8 549 aa13.02□□□□□ -0.33
USP33-208ENST00000477949 POTEB3A0JP26 581 aa13.01□□□□□ -0.33
USP33-208ENST00000477949 HOXB1P14653 301 aaPredicted RBP13.01□□□□□ -0.33
USP33-208ENST00000477949 POTEBQ6S5H4 581 aa13.01□□□□□ -0.33
USP33-208ENST00000477949 STK24Q9Y6E0 443 aa13.01□□□□□ -0.33
USP33-208ENST00000477949 ZNF608Q9ULD9 1512 aaPredicted RBP13□□□□□ -0.33
USP33-208ENST00000477949 CYB5RLQ6IPT4 315 aa13□□□□□ -0.33
USP33-208ENST00000477949 TMEM92Q6UXU6 159 aa13□□□□□ -0.33
USP33-208ENST00000477949 RIMBP2O15034 1052 aa12.98□□□□□ -0.33
USP33-208ENST00000477949 WIZO95785 1651 aa12.98□□□□□ -0.33
USP33-208ENST00000477949 FBXO22Q8NEZ5 403 aa12.97□□□□□ -0.33
USP33-208ENST00000477949 STK25O00506 426 aa12.96□□□□□ -0.33
USP33-208ENST00000477949 MMRN1Q13201 1228 aa12.96□□□□□ -0.33
USP33-208ENST00000477949 PKD2Q13563 968 aa12.96□□□□□ -0.33
USP33-208ENST00000477949 IFT140Q96RY7 1462 aa12.93□□□□□ -0.34
USP33-208ENST00000477949 MFRPQ9BY79 579 aa12.92□□□□□ -0.34
USP33-208ENST00000477949 KRTAP3-3Q9BYR6 98 aa12.92□□□□□ -0.34
USP33-208ENST00000477949 KRTAP3-2Q9BYR7 98 aa12.92□□□□□ -0.34
USP33-208ENST00000477949 ZSWIM6Q9HCJ5 1215 aa12.92□□□□□ -0.34
USP33-208ENST00000477949 ERBB3P21860 1342 aa12.91□□□□□ -0.34
USP33-208ENST00000477949 RSF1Q96T23 1441 aaPredicted RBP12.91□□□□□ -0.34
USP33-208ENST00000477949 RGL2O15211 777 aa12.91□□□□□ -0.34
USP33-208ENST00000477949 CHD1O14646 1710 aa12.91□□□□□ -0.34
USP33-208ENST00000477949 EIF4G3O43432 1585 aaKnown RBP12.9□□□□□ -0.34
USP33-208ENST00000477949 GPR153Q6NV75 609 aa12.86□□□□□ -0.35
USP33-208ENST00000477949 PRDM2Q13029 1718 aa12.85□□□□□ -0.35
USP33-208ENST00000477949 TOPBP1Q92547 1522 aa12.83□□□□□ -0.36
USP33-208ENST00000477949 VARS2Q5ST30 1063 aaKnown RBP12.81□□□□□ -0.36
USP33-208ENST00000477949 TARBP1Q13395 1621 aaKnown RBP12.8□□□□□ -0.36
USP33-208ENST00000477949 CLASP1Q7Z460 1538 aa12.79□□□□□ -0.36
USP33-208ENST00000477949 ARSIQ5FYB1 569 aa12.79□□□□□ -0.36
USP33-208ENST00000477949 TOP2AP11388 1531 aaKnown RBP12.78□□□□□ -0.36
USP33-208ENST00000477949 AQRO60306 1485 aaKnown RBP eCLIP12.78□□□□□ -0.366e-6■■■■□ 25.1
USP33-208ENST00000477949 KIF3CO14782 793 aa12.77□□□□□ -0.37
USP33-208ENST00000477949 C2orf72A6NCS6 295 aa12.76□□□□□ -0.37
USP33-208ENST00000477949 ZNF687Q8N1G0 1237 aa12.76□□□□□ -0.37
USP33-208ENST00000477949 DNMBPQ6XZF7 1577 aa12.72□□□□□ -0.37
USP33-208ENST00000477949 PPP1R37O75864 691 aa12.7□□□□□ -0.38
USP33-208ENST00000477949 TMC2Q8TDI7 906 aa12.7□□□□□ -0.38
USP33-208ENST00000477949 KHSRPQ92945 711 aaKnown RBP eCLIP12.7□□□□□ -0.38
USP33-208ENST00000477949 ABCC8Q09428 1581 aa12.69□□□□□ -0.38
USP33-208ENST00000477949 ZNF316A6NFI3 1004 aaPredicted RBP12.69□□□□□ -0.38
USP33-208ENST00000477949 SLC34A2O95436 690 aa12.67□□□□□ -0.38
USP33-208ENST00000477949 POLA1P09884 1462 aaPredicted RBP12.66□□□□□ -0.38
USP33-208ENST00000477949 HS6ST3Q8IZP7 471 aa12.66□□□□□ -0.38
USP33-208ENST00000477949 SYNJ1O43426 1573 aa12.64□□□□□ -0.39
USP33-208ENST00000477949 SNAPC4Q5SXM2 1469 aa12.64□□□□□ -0.39
USP33-208ENST00000477949 CCDC88BA6NC98 1476 aa12.63□□□□□ -0.39
USP33-208ENST00000477949 GAPVD1Q14C86 1478 aa12.62□□□□□ -0.39
USP33-208ENST00000477949 PCDHGA4Q9Y5G9 962 aa12.62□□□□□ -0.39
USP33-208ENST00000477949 NUDT7P0C024 238 aa12.61□□□□□ -0.39
USP33-208ENST00000477949 RAD54L2Q9Y4B4 1467 aa12.6□□□□□ -0.39
USP33-208ENST00000477949 WDR97A6NE52 1622 aa12.59□□□□□ -0.39
USP33-208ENST00000477949 CHGAP10645 457 aaKnown RBP12.59□□□□□ -0.39
USP33-208ENST00000477949 MAGI1Q96QZ7 1491 aaPredicted RBP12.59□□□□□ -0.39
USP33-208ENST00000477949 TDRD9Q8NDG6 1382 aaKnown RBP12.58□□□□□ -0.4
USP33-208ENST00000477949 ANKRD13DQ6ZTN6 518 aa12.57□□□□□ -0.4
USP33-208ENST00000477949 RNF166Q96A37 237 aaPredicted RBP12.57□□□□□ -0.4
USP33-208ENST00000477949 MYT1LQ9UL68 1186 aa12.57□□□□□ -0.4
USP33-208ENST00000477949 LMTK3Q96Q04 1460 aa12.57□□□□□ -0.4
USP33-208ENST00000477949 SOCS7O14512 581 aa12.56□□□□□ -0.4
USP33-208ENST00000477949 LHX6Q9UPM6 363 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms