RNA–Protein interactions for RNA: ENST00000477876.1

NUP58-210, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-210ENST00000477876 SPNS2Q8IVW8 549 aa12.25□□□□□ -0.45
NUP58-210ENST00000477876 MICALL2Q8IY33 904 aa12.25□□□□□ -0.45
NUP58-210ENST00000477876 RYDENQ9NUL5 291 aaKnown RBP12.21□□□□□ -0.45
NUP58-210ENST00000477876 PPP1R37O75864 691 aa12.2□□□□□ -0.46
NUP58-210ENST00000477876 RB1CC1Q8TDY2 1594 aa12.19□□□□□ -0.46
NUP58-210ENST00000477876 GTPBP6O43824 516 aaPredicted RBP12.14□□□□□ -0.47
NUP58-210ENST00000477876 BBXQ8WY36 941 aaPredicted RBP12.14□□□□□ -0.47
NUP58-210ENST00000477876 SNPHO15079 494 aa12.12□□□□□ -0.47
NUP58-210ENST00000477876 ST18O60284 1047 aa12.11□□□□□ -0.47
NUP58-210ENST00000477876 TMEM92Q6UXU6 159 aa12.11□□□□□ -0.47
NUP58-210ENST00000477876 NACADO15069 1562 aa12.1□□□□□ -0.47
NUP58-210ENST00000477876 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.05□□□□□ -0.48
NUP58-210ENST00000477876 C2orf72A6NCS6 295 aa12.02□□□□□ -0.49
NUP58-210ENST00000477876 KIF3CO14782 793 aa12.02□□□□□ -0.49
NUP58-210ENST00000477876 TMC2Q8TDI7 906 aa12.02□□□□□ -0.49
NUP58-210ENST00000477876 SPRYD3Q8NCJ5 442 aa12□□□□□ -0.49
NUP58-210ENST00000477876 HOXB3P14651 431 aaPredicted RBP11.99□□□□□ -0.49
NUP58-210ENST00000477876 UNC13AQ9UPW8 1703 aa11.99□□□□□ -0.49
NUP58-210ENST00000477876 DOK7Q18PE1 504 aa11.98□□□□□ -0.49
NUP58-210ENST00000477876 GPHNQ9NQX3 736 aaPredicted RBP11.96□□□□□ -0.49
NUP58-210ENST00000477876 BICRAQ9NZM4 1560 aa11.96□□□□□ -0.5
NUP58-210ENST00000477876 ZNF710Q8N1W2 664 aa11.94□□□□□ -0.5
NUP58-210ENST00000477876 PAXIP1Q6ZW49 1069 aaPredicted RBP11.93□□□□□ -0.5
NUP58-210ENST00000477876 RIMBP2O15034 1052 aa11.92□□□□□ -0.5
NUP58-210ENST00000477876 CFAP44Q96MT7 982 aa11.92□□□□□ -0.5
NUP58-210ENST00000477876 MYO15BQ96JP2 1530 aa11.91□□□□□ -0.5
NUP58-210ENST00000477876 PDE4AP27815 886 aa11.9□□□□□ -0.5
NUP58-210ENST00000477876 FOXK1P85037 733 aa11.9□□□□□ -0.5
NUP58-210ENST00000477876 CRISPLD2Q9H0B8 497 aa11.89□□□□□ -0.51
NUP58-210ENST00000477876 ZSWIM6Q9HCJ5 1215 aa11.89□□□□□ -0.51
NUP58-210ENST00000477876 NCKAP5LQ9HCH0 1330 aa11.87□□□□□ -0.51
NUP58-210ENST00000477876 DSG2Q14126 1118 aa11.87□□□□□ -0.51
NUP58-210ENST00000477876 PLPP6Q8IY26 295 aa11.87□□□□□ -0.51
NUP58-210ENST00000477876 HOXB1P14653 301 aaPredicted RBP11.86□□□□□ -0.51
NUP58-210ENST00000477876 MARVELD3Q96A59 401 aa11.86□□□□□ -0.51
NUP58-210ENST00000477876 SLC34A2O95436 690 aa11.85□□□□□ -0.51
NUP58-210ENST00000477876 CADPS2Q86UW7 1296 aa11.85□□□□□ -0.51
NUP58-210ENST00000477876 GPR153Q6NV75 609 aa11.84□□□□□ -0.51
NUP58-210ENST00000477876 LARP6Q9BRS8 491 aaKnown RBP11.83□□□□□ -0.52
NUP58-210ENST00000477876 EMP3P54852 163 aa11.82□□□□□ -0.52
NUP58-210ENST00000477876 ARSIQ5FYB1 569 aa11.82□□□□□ -0.52
NUP58-210ENST00000477876 PPP1R15BQ5SWA1 713 aa11.81□□□□□ -0.52
NUP58-210ENST00000477876 ZCCHC6Q5VYS8 1495 aaKnown RBP11.81□□□□□ -0.52
NUP58-210ENST00000477876 DDX27Q96GQ7 796 aaKnown RBP11.79□□□□□ -0.52
NUP58-210ENST00000477876 MFSD10Q14728 455 aa11.78□□□□□ -0.52
NUP58-210ENST00000477876 PCDHGA4Q9Y5G9 962 aa11.78□□□□□ -0.52
NUP58-210ENST00000477876 PTCD2Q8WV60 388 aaKnown RBP11.77□□□□□ -0.53
NUP58-210ENST00000477876 FAM205CA6NFA0 338 aa11.75□□□□□ -0.53
NUP58-210ENST00000477876 KHSRPQ92945 711 aaKnown RBP eCLIP11.75□□□□□ -0.532e-6■■■□□ 16.2
NUP58-210ENST00000477876 DCAF1Q9Y4B6 1507 aa11.75□□□□□ -0.53
NUP58-210ENST00000477876 TBC1D12O60347 775 aa11.74□□□□□ -0.53
NUP58-210ENST00000477876 ERBB3P21860 1342 aa11.73□□□□□ -0.53
NUP58-210ENST00000477876 HS3ST6Q96QI5 342 aa11.72□□□□□ -0.53
NUP58-210ENST00000477876 NUDT7P0C024 238 aa11.71□□□□□ -0.53
NUP58-210ENST00000477876 KRTAP3-3Q9BYR6 98 aa11.71□□□□□ -0.53
NUP58-210ENST00000477876 KRTAP3-2Q9BYR7 98 aa11.71□□□□□ -0.53
NUP58-210ENST00000477876 POTEB3A0JP26 581 aa11.7□□□□□ -0.54
NUP58-210ENST00000477876 POTEBQ6S5H4 581 aa11.7□□□□□ -0.54
NUP58-210ENST00000477876 OXER1Q8TDS5 423 aa11.7□□□□□ -0.54
NUP58-210ENST00000477876 SCRIBQ14160 1630 aa11.69□□□□□ -0.54
NUP58-210ENST00000477876 PLCB2Q00722 1185 aa11.68□□□□□ -0.54
NUP58-210ENST00000477876 UPF1Q92900 1129 aaKnown RBP eCLIP11.68□□□□□ -0.54
NUP58-210ENST00000477876 ZNF316A6NFI3 1004 aaPredicted RBP11.67□□□□□ -0.54
NUP58-210ENST00000477876 VARS2Q5ST30 1063 aaKnown RBP11.67□□□□□ -0.54
NUP58-210ENST00000477876 TSHZ2Q9NRE2 1034 aa11.67□□□□□ -0.54
NUP58-210ENST00000477876 KDM4FA0A1W2PPD8 638 aa11.66□□□□□ -0.54
NUP58-210ENST00000477876 CC2D2AQ9P2K1 1620 aa11.66□□□□□ -0.54
NUP58-210ENST00000477876 WDR70Q9NW82 654 aa11.64□□□□□ -0.55
NUP58-210ENST00000477876 LHX6Q9UPM6 363 aa11.64□□□□□ -0.55
NUP58-210ENST00000477876 CECR2Q9BXF3 1484 aa11.63□□□□□ -0.55
NUP58-210ENST00000477876 CAMK2BQ13554 666 aa11.63□□□□□ -0.55
NUP58-210ENST00000477876 EMILIN3Q9NT22 766 aa11.63□□□□□ -0.55
NUP58-210ENST00000477876 MAP3K9P80192 1104 aa11.62□□□□□ -0.55
NUP58-210ENST00000477876 SHROOM4Q9ULL8 1493 aa11.62□□□□□ -0.55
NUP58-210ENST00000477876 EIF4G1Q04637 1599 aaKnown RBP11.61□□□□□ -0.55
NUP58-210ENST00000477876 ZNF687Q8N1G0 1237 aa11.6□□□□□ -0.55
NUP58-210ENST00000477876 PSDA5PKW4 1024 aaPredicted RBP11.58□□□□□ -0.56
NUP58-210ENST00000477876 EVI5O60447 810 aa11.57□□□□□ -0.56
NUP58-210ENST00000477876 E2F4Q16254 413 aa11.57□□□□□ -0.56
NUP58-210ENST00000477876 ANO8Q9HCE9 1232 aaPredicted RBP11.56□□□□□ -0.56
NUP58-210ENST00000477876 DPYSL4O14531 572 aa11.52□□□□□ -0.57
NUP58-210ENST00000477876 PPP4R3BQ5MIZ7 849 aa11.5□□□□□ -0.57
NUP58-210ENST00000477876 HAP1P54257 671 aaPredicted RBP11.49□□□□□ -0.57
NUP58-210ENST00000477876 RNF166Q96A37 237 aaPredicted RBP11.49□□□□□ -0.57
NUP58-210ENST00000477876 PBX2P40425 430 aa11.48□□□□□ -0.57
NUP58-210ENST00000477876 ZNF454Q8N9F8 522 aa11.47□□□□□ -0.57
NUP58-210ENST00000477876 ARIH1Q9Y4X5 557 aaPredicted RBP11.47□□□□□ -0.57
NUP58-210ENST00000477876 FOSBP53539 338 aa11.46□□□□□ -0.57
NUP58-210ENST00000477876 SPDYE16A6NNV3 312 aaPredicted RBP11.44□□□□□ -0.58
NUP58-210ENST00000477876 POTEEQ6S8J3 1075 aa11.44□□□□□ -0.58
NUP58-210ENST00000477876 JPH4Q96JJ6 628 aa11.44□□□□□ -0.58
NUP58-210ENST00000477876 AXIN2Q9Y2T1 843 aa11.44□□□□□ -0.58
NUP58-210ENST00000477876 ARHGAP33O14559 1287 aa11.43□□□□□ -0.58
NUP58-210ENST00000477876 PDIA6Q15084 440 aa11.42□□□□□ -0.58
NUP58-210ENST00000477876 PTGER2P43116 358 aa11.41□□□□□ -0.58
NUP58-210ENST00000477876 ZDHHC16Q969W1 377 aa11.41□□□□□ -0.58
NUP58-210ENST00000477876 PHF14O94880 888 aa11.4□□□□□ -0.58
NUP58-210ENST00000477876 LSM11P83369 360 aaKnown RBP eCLIP11.4□□□□□ -0.58
NUP58-210ENST00000477876 ANKRD13DQ6ZTN6 518 aa11.4□□□□□ -0.58
NUP58-210ENST00000477876 PCDHGA10Q9Y5H3 936 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms