RNA–Protein interactions for RNA: ENST00000477703.5

SMIM4-203, Transcript of small integral membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM4, Length 1,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-203ENST00000477703 CAMSAP2Q08AD1 1489 aa28.23■■■□□ 2.11
SMIM4-203ENST00000477703 ABCC2Q92887 1545 aa28.23■■■□□ 2.11
SMIM4-203ENST00000477703 ROCK1Q13464 1354 aa28.21■■■□□ 2.11
SMIM4-203ENST00000477703 KDM6BO15054 1643 aa28.19■■■□□ 2.1
SMIM4-203ENST00000477703 SIN3AQ96ST3 1273 aa28.18■■■□□ 2.1
SMIM4-203ENST00000477703 UHRF1BP1LA0JNW5 1464 aa28.14■■■□□ 2.1
SMIM4-203ENST00000477703 DIEXFQ68CQ4 756 aaKnown RBP28.12■■■□□ 2.09
SMIM4-203ENST00000477703 ZNF777Q9ULD5 760 aaPredicted RBP28.12■■■□□ 2.09
SMIM4-203ENST00000477703 CROCC2H7BZ55 1655 aa28.1■■■□□ 2.09
SMIM4-203ENST00000477703 NEUROD1Q13562 356 aa28.08■■■□□ 2.09
SMIM4-203ENST00000477703 CDC42BPBQ9Y5S2 1711 aa28.08■■■□□ 2.08
SMIM4-203ENST00000477703 TIMELESSQ9UNS1 1208 aa28.07■■■□□ 2.08
SMIM4-203ENST00000477703 KDM5BQ9UGL1 1544 aa28.06■■■□□ 2.08
SMIM4-203ENST00000477703 DENND4BO75064 1496 aaPredicted RBP28.06■■■□□ 2.08
SMIM4-203ENST00000477703 ZCCHC11Q5TAX3 1644 aaKnown RBP28.06■■■□□ 2.08
SMIM4-203ENST00000477703 ADGBQ8N7X0 1667 aa28.05■■■□□ 2.08
SMIM4-203ENST00000477703 NCOA1Q15788 1441 aa28.05■■■□□ 2.08
SMIM4-203ENST00000477703 ADGRL2O95490 1459 aa28.05■■■□□ 2.08
SMIM4-203ENST00000477703 PREX2Q70Z35 1606 aa28.04■■■□□ 2.08
SMIM4-203ENST00000477703 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.03■■■□□ 2.08
SMIM4-203ENST00000477703 TTC37Q6PGP7 1564 aa28■■■□□ 2.07
SMIM4-203ENST00000477703 ACIN1Q9UKV3 1341 aaKnown RBP27.99■■■□□ 2.07
SMIM4-203ENST00000477703 TRIM52Q96A61 297 aa27.99■■■□□ 2.07
SMIM4-203ENST00000477703 SAMD9LQ8IVG5 1584 aa27.98■■■□□ 2.07
SMIM4-203ENST00000477703 OSCARQ8IYS5 282 aa27.97■■■□□ 2.07
SMIM4-203ENST00000477703 MBD5Q9P267 1494 aa27.97■■■□□ 2.07
SMIM4-203ENST00000477703 SHANK2Q9UPX8 1470 aa27.97■■■□□ 2.07
SMIM4-203ENST00000477703 ARHGEF5Q12774 1597 aa27.96■■■□□ 2.07
SMIM4-203ENST00000477703 MPHOSPH9Q99550 1183 aa27.96■■■□□ 2.07
SMIM4-203ENST00000477703 ANKRD30AQ9BXX3 1397 aa27.93■■■□□ 2.06
SMIM4-203ENST00000477703 HNRNPMP52272 730 aaKnown RBP eCLIP27.93■■■□□ 2.06
SMIM4-203ENST00000477703 PPP1R15AO75807 674 aaPredicted RBP27.92■■■□□ 2.06
SMIM4-203ENST00000477703 MYO5CQ9NQX4 1742 aa27.91■■■□□ 2.06
SMIM4-203ENST00000477703 KCNH8Q96L42 1107 aa27.91■■■□□ 2.06
SMIM4-203ENST00000477703 C9orf84Q5VXU9 1444 aa27.91■■■□□ 2.06
SMIM4-203ENST00000477703 ARHGAP5Q13017 1502 aa27.87■■■□□ 2.05
SMIM4-203ENST00000477703 TSPY4P0CV99 314 aa27.86■■■□□ 2.05
SMIM4-203ENST00000477703 TSPY10P0CW01 314 aa27.86■■■□□ 2.05
SMIM4-203ENST00000477703 RSPH4AQ5TD94 716 aa27.85■■■□□ 2.05
SMIM4-203ENST00000477703 CCDC141Q6ZP82 1450 aa27.84■■■□□ 2.05
SMIM4-203ENST00000477703 PLCH2O75038 1416 aa27.84■■■□□ 2.05
SMIM4-203ENST00000477703 TONSLQ96HA7 1378 aa27.84■■■□□ 2.05
SMIM4-203ENST00000477703 ANKRD50Q9ULJ7 1429 aa27.82■■■□□ 2.04
SMIM4-203ENST00000477703 PZPP20742 1482 aa27.82■■■□□ 2.04
SMIM4-203ENST00000477703 SYCP2Q9BX26 1530 aa27.81■■■□□ 2.04
SMIM4-203ENST00000477703 KIAA1107Q9UPP5 1409 aa27.8■■■□□ 2.04
SMIM4-203ENST00000477703 FOXD1Q16676 465 aa27.8■■■□□ 2.04
SMIM4-203ENST00000477703 ANKRD30BQ9BXX2 1392 aa27.79■■■□□ 2.04
SMIM4-203ENST00000477703 SLC4A1APQ9BWU0 796 aaKnown RBP27.77■■■□□ 2.04
SMIM4-203ENST00000477703 PLEKHH2Q8IVE3 1493 aa27.77■■■□□ 2.04
SMIM4-203ENST00000477703 MAST1Q9Y2H9 1570 aa27.76■■■□□ 2.03
SMIM4-203ENST00000477703 WDR7Q9Y4E6 1490 aa27.75■■■□□ 2.03
SMIM4-203ENST00000477703 ARHGEF12Q9NZN5 1544 aa27.75■■■□□ 2.03
SMIM4-203ENST00000477703 KIF15Q9NS87 1388 aa27.74■■■□□ 2.03
SMIM4-203ENST00000477703 EFCAB2Q5VUJ9 269 aa27.72■■■□□ 2.03
SMIM4-203ENST00000477703 ARAP3Q8WWN8 1544 aa27.7■■■□□ 2.03
SMIM4-203ENST00000477703 RPRD2Q5VT52 1461 aaKnown RBP27.67■■■□□ 2.02
SMIM4-203ENST00000477703 ABCC1P33527 1531 aa27.67■■■□□ 2.02
SMIM4-203ENST00000477703 KDM5DQ9BY66 1539 aa27.67■■■□□ 2.02
SMIM4-203ENST00000477703 MIER1Q8N108 512 aa27.66■■■□□ 2.02
SMIM4-203ENST00000477703 ABCA9Q8IUA7 1624 aa27.66■■■□□ 2.02
SMIM4-203ENST00000477703 ASXL2Q76L83 1435 aa27.66■■■□□ 2.02
SMIM4-203ENST00000477703 PLXNC1O60486 1568 aa27.63■■■□□ 2.01
SMIM4-203ENST00000477703 NUP155O75694 1391 aa27.63■■■□□ 2.01
SMIM4-203ENST00000477703 PKD2Q13563 968 aa27.61■■■□□ 2.01
SMIM4-203ENST00000477703 L3MBTL2Q969R5 705 aa27.6■■■□□ 2.01
SMIM4-203ENST00000477703 TRAPPC8Q9Y2L5 1435 aa27.6■■■□□ 2.01
SMIM4-203ENST00000477703 TEX14Q8IWB6 1497 aa27.56■■■□□ 2
SMIM4-203ENST00000477703 NPM1P06748 294 aaKnown RBP eCLIP27.54■■■□□ 2
SMIM4-203ENST00000477703 FANCAO15360 1455 aa27.53■■■□□ 2
SMIM4-203ENST00000477703 DUOX2Q9NRD8 1548 aa27.52■■■□□ 2
SMIM4-203ENST00000477703 UNC13BO14795 1591 aa27.52■■■□□ 2
SMIM4-203ENST00000477703 FAM135AQ9P2D6 1515 aa27.49■■□□□ 1.99
SMIM4-203ENST00000477703 HIRIP3Q9BW71 556 aaPredicted RBP27.49■■□□□ 1.99
SMIM4-203ENST00000477703 AFAP1Q8N556 730 aa27.48■■□□□ 1.99
SMIM4-203ENST00000477703 RTEL1-TNFRSF6BF6WH68 1400 aa27.48■■□□□ 1.99
SMIM4-203ENST00000477703 ERBINQ96RT1 1412 aa27.46■■□□□ 1.99
SMIM4-203ENST00000477703 SPAG9O60271 1321 aaKnown RBP27.44■■□□□ 1.98
SMIM4-203ENST00000477703 NBPF8Q3BBV2 869 aa27.44■■□□□ 1.98
SMIM4-203ENST00000477703 ZFYVE16Q7Z3T8 1539 aa27.43■■□□□ 1.98
SMIM4-203ENST00000477703 IQGAP3Q86VI3 1631 aa27.41■■□□□ 1.98
SMIM4-203ENST00000477703 MAGI2Q86UL8 1455 aa27.41■■□□□ 1.98
SMIM4-203ENST00000477703 ADGRL1O94910 1474 aa27.41■■□□□ 1.98
SMIM4-203ENST00000477703 SCAPERQ9BY12 1400 aa27.4■■□□□ 1.98
SMIM4-203ENST00000477703 INO80Q9ULG1 1556 aaPredicted RBP27.38■■□□□ 1.97
SMIM4-203ENST00000477703 DDX10Q13206 875 aaKnown RBP27.36■■□□□ 1.97
SMIM4-203ENST00000477703 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.36■■□□□ 1.97
SMIM4-203ENST00000477703 CD109Q6YHK3 1445 aa27.35■■□□□ 1.97
SMIM4-203ENST00000477703 ATP7AQ04656 1500 aa27.35■■□□□ 1.97
SMIM4-203ENST00000477703 HSPA5P11021 654 aaKnown RBP27.34■■□□□ 1.97
SMIM4-203ENST00000477703 PLA2R1Q13018 1463 aa27.31■■□□□ 1.96
SMIM4-203ENST00000477703 RIMBP3CA6NJZ7 1639 aa27.31■■□□□ 1.96
SMIM4-203ENST00000477703 RIMBP3BA6NNM3 1639 aa27.31■■□□□ 1.96
SMIM4-203ENST00000477703 RIMBP3Q9UFD9 1639 aa27.31■■□□□ 1.96
SMIM4-203ENST00000477703 EIF4G2P78344 907 aaKnown RBP eCLIP27.3■■□□□ 1.96
SMIM4-203ENST00000477703 CYB5RLQ6IPT4 315 aa27.29■■□□□ 1.96
SMIM4-203ENST00000477703 CFAP74Q9C0B2 1584 aa27.28■■□□□ 1.96
SMIM4-203ENST00000477703 KIDINS220Q9ULH0 1771 aa27.26■■□□□ 1.96
SMIM4-203ENST00000477703 DEPDC5O75140 1603 aa27.26■■□□□ 1.95
SMIM4-203ENST00000477703 UHRF1BP1Q6BDS2 1440 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms