RNA–Protein interactions for RNA: ENST00000473642.1

CCL20-203, Transcript of C-C motif chemokine ligand 20, humanhuman

TSL 2

Gene CCL20, Length 680 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-203ENST00000473642 PHF8Q9UPP1 1060 aa12.8□□□□□ -0.36
CCL20-203ENST00000473642 ERBB3P21860 1342 aa12.8□□□□□ -0.36
CCL20-203ENST00000473642 RB1CC1Q8TDY2 1594 aa12.78□□□□□ -0.36
CCL20-203ENST00000473642 KRTAP3-3Q9BYR6 98 aa12.78□□□□□ -0.36
CCL20-203ENST00000473642 KRTAP3-2Q9BYR7 98 aa12.78□□□□□ -0.36
CCL20-203ENST00000473642 MS4A4AQ96JQ5 239 aa12.76□□□□□ -0.37
CCL20-203ENST00000473642 NLRP6P59044 892 aa12.74□□□□□ -0.37
CCL20-203ENST00000473642 TMEM92Q6UXU6 159 aa12.74□□□□□ -0.37
CCL20-203ENST00000473642 BCL11BQ9C0K0 894 aaPredicted RBP12.73□□□□□ -0.37
CCL20-203ENST00000473642 RTN4Q9NQC3 1192 aaKnown RBP12.73□□□□□ -0.37
CCL20-203ENST00000473642 ZSWIM6Q9HCJ5 1215 aa12.72□□□□□ -0.37
CCL20-203ENST00000473642 STK24Q9Y6E0 443 aa12.72□□□□□ -0.37
CCL20-203ENST00000473642 VARS2Q5ST30 1063 aaKnown RBP12.68□□□□□ -0.38
CCL20-203ENST00000473642 ECM2O94769 699 aaPredicted RBP12.67□□□□□ -0.38
CCL20-203ENST00000473642 STK25O00506 426 aa12.66□□□□□ -0.38
CCL20-203ENST00000473642 GPR153Q6NV75 609 aa12.64□□□□□ -0.39
CCL20-203ENST00000473642 FBXO22Q8NEZ5 403 aa12.63□□□□□ -0.39
CCL20-203ENST00000473642 ZNF687Q8N1G0 1237 aa12.6□□□□□ -0.39
CCL20-203ENST00000473642 MFRPQ9BY79 579 aa12.6□□□□□ -0.39
CCL20-203ENST00000473642 ARSIQ5FYB1 569 aa12.59□□□□□ -0.39
CCL20-203ENST00000473642 UNC13AQ9UPW8 1703 aa12.57□□□□□ -0.4
CCL20-203ENST00000473642 NACADO15069 1562 aa12.52□□□□□ -0.4
CCL20-203ENST00000473642 RGL2O15211 777 aa12.52□□□□□ -0.41
CCL20-203ENST00000473642 RNF166Q96A37 237 aaPredicted RBP12.52□□□□□ -0.41
CCL20-203ENST00000473642 C2orf72A6NCS6 295 aa12.51□□□□□ -0.41
CCL20-203ENST00000473642 PKD2Q13563 968 aa12.51□□□□□ -0.41
CCL20-203ENST00000473642 ZNF316A6NFI3 1004 aaPredicted RBP12.5□□□□□ -0.41
CCL20-203ENST00000473642 KHSRPQ92945 711 aaKnown RBP eCLIP12.5□□□□□ -0.41
CCL20-203ENST00000473642 MYT1LQ9UL68 1186 aa12.49□□□□□ -0.41
CCL20-203ENST00000473642 BICRAQ9NZM4 1560 aa12.47□□□□□ -0.41
CCL20-203ENST00000473642 CECR2Q9BXF3 1484 aa12.47□□□□□ -0.41
CCL20-203ENST00000473642 KIF3CO14782 793 aa12.47□□□□□ -0.41
CCL20-203ENST00000473642 TMC2Q8TDI7 906 aa12.47□□□□□ -0.41
CCL20-203ENST00000473642 ANKRD13DQ6ZTN6 518 aa12.46□□□□□ -0.41
CCL20-203ENST00000473642 PTGER2P43116 358 aa12.44□□□□□ -0.42
CCL20-203ENST00000473642 NUDT7P0C024 238 aa12.43□□□□□ -0.42
CCL20-203ENST00000473642 CC2D2AQ9P2K1 1620 aa12.42□□□□□ -0.42
CCL20-203ENST00000473642 SLC34A2O95436 690 aa12.4□□□□□ -0.42
CCL20-203ENST00000473642 PCDHGA4Q9Y5G9 962 aa12.39□□□□□ -0.43
CCL20-203ENST00000473642 PPP1R37O75864 691 aa12.37□□□□□ -0.43
CCL20-203ENST00000473642 LSM11P83369 360 aaKnown RBP eCLIP12.37□□□□□ -0.43
CCL20-203ENST00000473642 LHX6Q9UPM6 363 aa12.36□□□□□ -0.43
CCL20-203ENST00000473642 PBX2P40425 430 aa12.35□□□□□ -0.43
CCL20-203ENST00000473642 DCAF8L2P0C7V8 631 aa12.29□□□□□ -0.44
CCL20-203ENST00000473642 AXIN2Q9Y2T1 843 aa12.29□□□□□ -0.44
CCL20-203ENST00000473642 PSDA5PKW4 1024 aaPredicted RBP12.27□□□□□ -0.45
CCL20-203ENST00000473642 HS6ST3Q8IZP7 471 aa12.26□□□□□ -0.45
CCL20-203ENST00000473642 FOXK1P85037 733 aa12.25□□□□□ -0.45
CCL20-203ENST00000473642 POTEEQ6S8J3 1075 aa12.24□□□□□ -0.45
CCL20-203ENST00000473642 PLPP6Q8IY26 295 aa12.24□□□□□ -0.45
CCL20-203ENST00000473642 PTCD2Q8WV60 388 aaKnown RBP12.24□□□□□ -0.45
CCL20-203ENST00000473642 ARHGAP33O14559 1287 aa12.23□□□□□ -0.45
CCL20-203ENST00000473642 TBC1D12O60347 775 aa12.23□□□□□ -0.45
CCL20-203ENST00000473642 CHGAP10645 457 aaKnown RBP12.23□□□□□ -0.45
CCL20-203ENST00000473642 GPHNQ9NQX3 736 aaPredicted RBP12.23□□□□□ -0.45
CCL20-203ENST00000473642 EIF4G1Q04637 1599 aaKnown RBP12.21□□□□□ -0.46
CCL20-203ENST00000473642 SHROOM4Q9ULL8 1493 aa12.18□□□□□ -0.46
CCL20-203ENST00000473642 DSG2Q14126 1118 aa12.17□□□□□ -0.46
CCL20-203ENST00000473642 ADGRD1Q6QNK2 874 aa12.17□□□□□ -0.46
CCL20-203ENST00000473642 KDM4FA0A1W2PPD8 638 aa12.16□□□□□ -0.46
CCL20-203ENST00000473642 RYDENQ9NUL5 291 aaKnown RBP12.16□□□□□ -0.46
CCL20-203ENST00000473642 CUX2O14529 1486 aa12.15□□□□□ -0.46
CCL20-203ENST00000473642 PPP4R3BQ5MIZ7 849 aa12.15□□□□□ -0.46
CCL20-203ENST00000473642 HCSTQ9UBK5 93 aa12.13□□□□□ -0.47
CCL20-203ENST00000473642 TK2O00142 265 aa12.12□□□□□ -0.47
CCL20-203ENST00000473642 PSEN2P49810 448 aa12.12□□□□□ -0.47
CCL20-203ENST00000473642 STAC3Q96MF2 364 aa12.12□□□□□ -0.47
CCL20-203ENST00000473642 KCNH8Q96L42 1107 aa12.11□□□□□ -0.47
CCL20-203ENST00000473642 MYO15BQ96JP2 1530 aa12.1□□□□□ -0.47
CCL20-203ENST00000473642 DMRTA1Q5VZB9 504 aa12.09□□□□□ -0.47
CCL20-203ENST00000473642 NKX1-1Q15270 411 aaPredicted RBP12.07□□□□□ -0.48
CCL20-203ENST00000473642 UPF1Q92900 1129 aaKnown RBP eCLIP12.06□□□□□ -0.48
CCL20-203ENST00000473642 PLA2G2EQ9NZK7 142 aa12.06□□□□□ -0.48
CCL20-203ENST00000473642 HRO43593 1189 aa12.04□□□□□ -0.48
CCL20-203ENST00000473642 KCNK17Q96T54 332 aa12.04□□□□□ -0.48
CCL20-203ENST00000473642 OXER1Q8TDS5 423 aa12.03□□□□□ -0.48
CCL20-203ENST00000473642 PDE4AP27815 886 aa12.02□□□□□ -0.49
CCL20-203ENST00000473642 PPP1R15BQ5SWA1 713 aa12.02□□□□□ -0.49
CCL20-203ENST00000473642 CRISPLD2Q9H0B8 497 aa12.02□□□□□ -0.49
CCL20-203ENST00000473642 ZNF454Q8N9F8 522 aa12.01□□□□□ -0.49
CCL20-203ENST00000473642 KCTD12Q96CX2 325 aaKnown RBP12.01□□□□□ -0.49
CCL20-203ENST00000473642 BCL2L12Q9HB09 334 aa11.95□□□□□ -0.5
CCL20-203ENST00000473642 VPS9D1Q9Y2B5 631 aa11.95□□□□□ -0.5
CCL20-203ENST00000473642 NCKAP5LQ9HCH0 1330 aa11.93□□□□□ -0.5
CCL20-203ENST00000473642 PTPREP23469 700 aa11.93□□□□□ -0.5
CCL20-203ENST00000473642 ERCC6Q03468 1493 aa11.93□□□□□ -0.5
CCL20-203ENST00000473642 LARP6Q9BRS8 491 aaKnown RBP11.92□□□□□ -0.5
CCL20-203ENST00000473642 FOSBP53539 338 aa11.91□□□□□ -0.5
CCL20-203ENST00000473642 GTPBP6O43824 516 aaPredicted RBP11.9□□□□□ -0.5
CCL20-203ENST00000473642 EVI5O60447 810 aa11.9□□□□□ -0.5
CCL20-203ENST00000473642 PTPN5P54829 565 aa11.9□□□□□ -0.5
CCL20-203ENST00000473642 DDX27Q96GQ7 796 aaKnown RBP11.9□□□□□ -0.5
CCL20-203ENST00000473642 SLC4A5Q9BY07 1137 aa11.9□□□□□ -0.5
CCL20-203ENST00000473642 ANO8Q9HCE9 1232 aaPredicted RBP11.9□□□□□ -0.5
CCL20-203ENST00000473642 MAP3K9P80192 1104 aa11.89□□□□□ -0.51
CCL20-203ENST00000473642 GOLGA8CPA6NN73 597 aa11.88□□□□□ -0.51
CCL20-203ENST00000473642 SCRIBQ14160 1630 aa11.88□□□□□ -0.51
CCL20-203ENST00000473642 ZDHHC16Q969W1 377 aa11.87□□□□□ -0.51
CCL20-203ENST00000473642 JPH4Q96JJ6 628 aa11.87□□□□□ -0.51
CCL20-203ENST00000473642 MRPL50Q8N5N7 158 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms