RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 ABCC10Q5T3U5 1492 aa13.87□□□□□ -0.19
SMC1A-205ENST00000469129 ARID3CA6NKF2 412 aa13.86□□□□□ -0.19
SMC1A-205ENST00000469129 CDC42BPBQ9Y5S2 1711 aa13.85□□□□□ -0.19
SMC1A-205ENST00000469129 PLEKHD1A6NEE1 506 aa13.84□□□□□ -0.19
SMC1A-205ENST00000469129 GPATCH8Q9UKJ3 1502 aaKnown RBP13.84□□□□□ -0.19
SMC1A-205ENST00000469129 KDM5BQ9UGL1 1544 aa13.83□□□□□ -0.2
SMC1A-205ENST00000469129 DAPK1P53355 1430 aa13.82□□□□□ -0.2
SMC1A-205ENST00000469129 TTC37Q6PGP7 1564 aa13.82□□□□□ -0.2
SMC1A-205ENST00000469129 ARHGEF5Q12774 1597 aa13.81□□□□□ -0.2
SMC1A-205ENST00000469129 TRHP20396 242 aaPredicted RBP13.81□□□□□ -0.2
SMC1A-205ENST00000469129 NAIPQ13075 1403 aa13.8□□□□□ -0.2
SMC1A-205ENST00000469129 PTPRKQ15262 1439 aa13.8□□□□□ -0.2
SMC1A-205ENST00000469129 SHANK2Q9UPX8 1470 aa13.8□□□□□ -0.2
SMC1A-205ENST00000469129 ACIN1Q9UKV3 1341 aaKnown RBP13.79□□□□□ -0.2
SMC1A-205ENST00000469129 ROCK1Q13464 1354 aa13.79□□□□□ -0.2
SMC1A-205ENST00000469129 MAPKBP1O60336 1514 aa13.78□□□□□ -0.2
SMC1A-205ENST00000469129 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.78□□□□□ -0.2
SMC1A-205ENST00000469129 ADGRL2O95490 1459 aa13.77□□□□□ -0.21
SMC1A-205ENST00000469129 SAMD9LQ8IVG5 1584 aa13.76□□□□□ -0.21
SMC1A-205ENST00000469129 ARAP3Q8WWN8 1544 aa13.75□□□□□ -0.21
SMC1A-205ENST00000469129 CFDP1Q9UEE9 299 aaPredicted RBP13.75□□□□□ -0.21
SMC1A-205ENST00000469129 ABCC5O15440 1437 aa13.74□□□□□ -0.21
SMC1A-205ENST00000469129 ARHGAP5Q13017 1502 aa13.74□□□□□ -0.21
SMC1A-205ENST00000469129 PLEKHH2Q8IVE3 1493 aa13.74□□□□□ -0.21
SMC1A-205ENST00000469129 MAST1Q9Y2H9 1570 aa13.73□□□□□ -0.21
SMC1A-205ENST00000469129 ABCA9Q8IUA7 1624 aa13.72□□□□□ -0.21
SMC1A-205ENST00000469129 NPM1P06748 294 aaKnown RBP eCLIP13.71□□□□□ -0.21
SMC1A-205ENST00000469129 WDR7Q9Y4E6 1490 aa13.71□□□□□ -0.21
SMC1A-205ENST00000469129 CCDC141Q6ZP82 1450 aa13.7□□□□□ -0.22
SMC1A-205ENST00000469129 KDM6BO15054 1643 aa13.7□□□□□ -0.22
SMC1A-205ENST00000469129 PLXNC1O60486 1568 aa13.69□□□□□ -0.22
SMC1A-205ENST00000469129 CFAP74Q9C0B2 1584 aa13.69□□□□□ -0.22
SMC1A-205ENST00000469129 SYCP2Q9BX26 1530 aa13.69□□□□□ -0.22
SMC1A-205ENST00000469129 C9orf84Q5VXU9 1444 aa13.67□□□□□ -0.22
SMC1A-205ENST00000469129 ABCC1P33527 1531 aa13.67□□□□□ -0.22
SMC1A-205ENST00000469129 ANKRD30AQ9BXX3 1397 aa13.67□□□□□ -0.22
SMC1A-205ENST00000469129 KIF13AQ9H1H9 1805 aa13.66□□□□□ -0.22
SMC1A-205ENST00000469129 ZNF644Q9H582 1327 aaPredicted RBP13.64□□□□□ -0.23
SMC1A-205ENST00000469129 PLCH2O75038 1416 aa13.64□□□□□ -0.23
SMC1A-205ENST00000469129 NCOA1Q15788 1441 aa13.64□□□□□ -0.23
SMC1A-205ENST00000469129 KIAA1107Q9UPP5 1409 aa13.64□□□□□ -0.23
SMC1A-205ENST00000469129 MBD5Q9P267 1494 aa13.64□□□□□ -0.23
SMC1A-205ENST00000469129 CHIC2Q9UKJ5 165 aa13.64□□□□□ -0.23
SMC1A-205ENST00000469129 ZNF777Q9ULD5 760 aaPredicted RBP13.64□□□□□ -0.23
SMC1A-205ENST00000469129 DIP2BQ9P265 1576 aa13.63□□□□□ -0.23
SMC1A-205ENST00000469129 RSPH4AQ5TD94 716 aa13.63□□□□□ -0.23
SMC1A-205ENST00000469129 RRP7BPQ9NSQ0 103 aa13.63□□□□□ -0.23
SMC1A-205ENST00000469129 KDM5DQ9BY66 1539 aa13.62□□□□□ -0.23
SMC1A-205ENST00000469129 ASXL2Q76L83 1435 aa13.61□□□□□ -0.23
SMC1A-205ENST00000469129 UNC13BO14795 1591 aa13.6□□□□□ -0.23
SMC1A-205ENST00000469129 TIMELESSQ9UNS1 1208 aa13.6□□□□□ -0.23
SMC1A-205ENST00000469129 FAM69CQ0P6D2 419 aa13.59□□□□□ -0.23
SMC1A-205ENST00000469129 ANKRD50Q9ULJ7 1429 aa13.58□□□□□ -0.24
SMC1A-205ENST00000469129 TSPY4P0CV99 314 aa13.58□□□□□ -0.24
SMC1A-205ENST00000469129 TSPY10P0CW01 314 aa13.58□□□□□ -0.24
SMC1A-205ENST00000469129 INO80Q9ULG1 1556 aaPredicted RBP13.57□□□□□ -0.24
SMC1A-205ENST00000469129 DUOX2Q9NRD8 1548 aa13.56□□□□□ -0.24
SMC1A-205ENST00000469129 EFCAB2Q5VUJ9 269 aa13.56□□□□□ -0.24
SMC1A-205ENST00000469129 KIF15Q9NS87 1388 aa13.56□□□□□ -0.24
SMC1A-205ENST00000469129 FANCAO15360 1455 aa13.55□□□□□ -0.24
SMC1A-205ENST00000469129 TRIM52Q96A61 297 aa13.55□□□□□ -0.24
SMC1A-205ENST00000469129 KCNH8Q96L42 1107 aa13.55□□□□□ -0.24
SMC1A-205ENST00000469129 DENND4BO75064 1496 aaPredicted RBP13.55□□□□□ -0.24
SMC1A-205ENST00000469129 PZPP20742 1482 aa13.55□□□□□ -0.24
SMC1A-205ENST00000469129 ZFYVE16Q7Z3T8 1539 aa13.54□□□□□ -0.24
SMC1A-205ENST00000469129 TONSLQ96HA7 1378 aa13.54□□□□□ -0.24
SMC1A-205ENST00000469129 IQGAP3Q86VI3 1631 aa13.53□□□□□ -0.24
SMC1A-205ENST00000469129 ZNF316A6NFI3 1004 aaPredicted RBP13.53□□□□□ -0.24
SMC1A-205ENST00000469129 ERBINQ96RT1 1412 aa13.53□□□□□ -0.24
SMC1A-205ENST00000469129 GLI2P10070 1586 aa13.53□□□□□ -0.24
SMC1A-205ENST00000469129 EIF2AK4Q9P2K8 1649 aaKnown RBP13.53□□□□□ -0.24
SMC1A-205ENST00000469129 ARHGEF12Q9NZN5 1544 aa13.52□□□□□ -0.25
SMC1A-205ENST00000469129 TSPOAP1O95153 1857 aa13.52□□□□□ -0.25
SMC1A-205ENST00000469129 MAP3K4Q9Y6R4 1608 aa13.51□□□□□ -0.25
SMC1A-205ENST00000469129 ATP7AQ04656 1500 aa13.51□□□□□ -0.25
SMC1A-205ENST00000469129 ADGRL1O94910 1474 aa13.51□□□□□ -0.25
SMC1A-205ENST00000469129 RTEL1-TNFRSF6BF6WH68 1400 aa13.51□□□□□ -0.25
SMC1A-205ENST00000469129 HNRNPMP52272 730 aaKnown RBP eCLIP13.51□□□□□ -0.25
SMC1A-205ENST00000469129 MPHOSPH9Q99550 1183 aa13.5□□□□□ -0.25
SMC1A-205ENST00000469129 DEPDC5O75140 1603 aa13.5□□□□□ -0.25
SMC1A-205ENST00000469129 MAGI2Q86UL8 1455 aa13.49□□□□□ -0.25
SMC1A-205ENST00000469129 FAM135AQ9P2D6 1515 aa13.48□□□□□ -0.25
SMC1A-205ENST00000469129 RPRD2Q5VT52 1461 aaKnown RBP13.48□□□□□ -0.25
SMC1A-205ENST00000469129 PPRC1Q5VV67 1664 aaKnown RBP13.47□□□□□ -0.25
SMC1A-205ENST00000469129 KDM5CP41229 1560 aa13.46□□□□□ -0.25
SMC1A-205ENST00000469129 HECW2Q9P2P5 1572 aa13.46□□□□□ -0.25
SMC1A-205ENST00000469129 NEUROD1Q13562 356 aa13.46□□□□□ -0.25
SMC1A-205ENST00000469129 SIN3AQ96ST3 1273 aa13.46□□□□□ -0.25
SMC1A-205ENST00000469129 SLC4A1APQ9BWU0 796 aaKnown RBP13.46□□□□□ -0.25
SMC1A-205ENST00000469129 ZNF518AQ6AHZ1 1483 aa13.46□□□□□ -0.25
SMC1A-205ENST00000469129 NEO1Q92859 1461 aa13.46□□□□□ -0.25
SMC1A-205ENST00000469129 TRAPPC8Q9Y2L5 1435 aa13.46□□□□□ -0.26
SMC1A-205ENST00000469129 KIDINS220Q9ULH0 1771 aa13.45□□□□□ -0.26
SMC1A-205ENST00000469129 ANKRD30BQ9BXX2 1392 aa13.45□□□□□ -0.26
SMC1A-205ENST00000469129 CD109Q6YHK3 1445 aa13.44□□□□□ -0.26
SMC1A-205ENST00000469129 BCORL1Q5H9F3 1711 aa13.44□□□□□ -0.26
SMC1A-205ENST00000469129 TET3O43151 1660 aa13.43□□□□□ -0.26
SMC1A-205ENST00000469129 NUP155O75694 1391 aa13.43□□□□□ -0.26
SMC1A-205ENST00000469129 TEX14Q8IWB6 1497 aa13.42□□□□□ -0.26
SMC1A-205ENST00000469129 SPAG9O60271 1321 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms