RNA–Protein interactions for RNA: ENST00000467661.5

NELFA-213, Transcript of negative elongation factor complex member A, humanhuman

TSL 1 (best)

Gene NELFA, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-213ENST00000467661 ROCK1Q13464 1354 aa25.32■■□□□ 1.64
NELFA-213ENST00000467661 SCAF1Q9H7N4 1312 aaKnown RBP25.32■■□□□ 1.64
NELFA-213ENST00000467661 RRP7BPQ9NSQ0 103 aa25.31■■□□□ 1.64
NELFA-213ENST00000467661 CHIC2Q9UKJ5 165 aa25.3■■□□□ 1.64
NELFA-213ENST00000467661 TONSLQ96HA7 1378 aa25.3■■□□□ 1.64
NELFA-213ENST00000467661 PPP1R15AO75807 674 aaPredicted RBP25.27■■□□□ 1.64
NELFA-213ENST00000467661 PTPRGP23470 1445 aa25.27■■□□□ 1.64
NELFA-213ENST00000467661 KIF14Q15058 1648 aa25.25■■□□□ 1.63
NELFA-213ENST00000467661 ABCC5O15440 1437 aa25.25■■□□□ 1.63
NELFA-213ENST00000467661 KDM6BO15054 1643 aa25.24■■□□□ 1.63
NELFA-213ENST00000467661 CAMSAP2Q08AD1 1489 aa25.23■■□□□ 1.63
NELFA-213ENST00000467661 GPATCH8Q9UKJ3 1502 aaKnown RBP25.23■■□□□ 1.63
NELFA-213ENST00000467661 ADGBQ8N7X0 1667 aa25.22■■□□□ 1.63
NELFA-213ENST00000467661 CYB5RLQ6IPT4 315 aa25.2■■□□□ 1.63
NELFA-213ENST00000467661 TRIM52Q96A61 297 aa25.2■■□□□ 1.62
NELFA-213ENST00000467661 CFDP1Q9UEE9 299 aaPredicted RBP25.19■■□□□ 1.62
NELFA-213ENST00000467661 CROCC2H7BZ55 1655 aa25.18■■□□□ 1.62
NELFA-213ENST00000467661 ATP10BO94823 1461 aa25.18■■□□□ 1.62
NELFA-213ENST00000467661 PLEKHD1A6NEE1 506 aa25.17■■□□□ 1.62
NELFA-213ENST00000467661 YTHDC1Q96MU7 727 aaKnown RBP25.17■■□□□ 1.62
NELFA-213ENST00000467661 ZNF644Q9H582 1327 aaPredicted RBP25.15■■□□□ 1.62
NELFA-213ENST00000467661 CDC42BPAQ5VT25 1732 aa25.15■■□□□ 1.62
NELFA-213ENST00000467661 DENND4BO75064 1496 aaPredicted RBP25.13■■□□□ 1.61
NELFA-213ENST00000467661 MPHOSPH9Q99550 1183 aa25.12■■□□□ 1.61
NELFA-213ENST00000467661 ADGRL2O95490 1459 aa25.12■■□□□ 1.61
NELFA-213ENST00000467661 ABCC10Q5T3U5 1492 aa25.12■■□□□ 1.61
NELFA-213ENST00000467661 ABCC2Q92887 1545 aa25.1■■□□□ 1.61
NELFA-213ENST00000467661 UHRF1BP1LA0JNW5 1464 aa25.09■■□□□ 1.61
NELFA-213ENST00000467661 KDM5BQ9UGL1 1544 aa25.07■■□□□ 1.6
NELFA-213ENST00000467661 SHANK2Q9UPX8 1470 aa25.05■■□□□ 1.6
NELFA-213ENST00000467661 NCOA1Q15788 1441 aa25.05■■□□□ 1.6
NELFA-213ENST00000467661 ANKRD30AQ9BXX3 1397 aa25.03■■□□□ 1.6
NELFA-213ENST00000467661 ZNF777Q9ULD5 760 aaPredicted RBP25.03■■□□□ 1.6
NELFA-213ENST00000467661 GTF3C3Q9Y5Q9 886 aa25.03■■□□□ 1.6
NELFA-213ENST00000467661 ARHGEF5Q12774 1597 aa24.98■■□□□ 1.59
NELFA-213ENST00000467661 ZCCHC11Q5TAX3 1644 aaKnown RBP24.98■■□□□ 1.59
NELFA-213ENST00000467661 PREX2Q70Z35 1606 aa24.97■■□□□ 1.59
NELFA-213ENST00000467661 ANKRD30BQ9BXX2 1392 aa24.97■■□□□ 1.59
NELFA-213ENST00000467661 RPRD2Q5VT52 1461 aaKnown RBP24.96■■□□□ 1.59
NELFA-213ENST00000467661 DDX10Q13206 875 aaKnown RBP24.95■■□□□ 1.58
NELFA-213ENST00000467661 SLC4A1APQ9BWU0 796 aaKnown RBP24.95■■□□□ 1.58
NELFA-213ENST00000467661 PZPP20742 1482 aa24.94■■□□□ 1.58
NELFA-213ENST00000467661 C9orf84Q5VXU9 1444 aa24.93■■□□□ 1.58
NELFA-213ENST00000467661 CDC42BPBQ9Y5S2 1711 aa24.92■■□□□ 1.58
NELFA-213ENST00000467661 ANKRD50Q9ULJ7 1429 aa24.91■■□□□ 1.58
NELFA-213ENST00000467661 NPM1P06748 294 aaKnown RBP eCLIP24.89■■□□□ 1.57
NELFA-213ENST00000467661 TSPY4P0CV99 314 aa24.88■■□□□ 1.57
NELFA-213ENST00000467661 TSPY10P0CW01 314 aa24.88■■□□□ 1.57
NELFA-213ENST00000467661 SAMD9LQ8IVG5 1584 aa24.87■■□□□ 1.57
NELFA-213ENST00000467661 FOXD1Q16676 465 aa24.87■■□□□ 1.57
NELFA-213ENST00000467661 HIRIP3Q9BW71 556 aaPredicted RBP24.86■■□□□ 1.57
NELFA-213ENST00000467661 CCDC141Q6ZP82 1450 aa24.85■■□□□ 1.57
NELFA-213ENST00000467661 TEX14Q8IWB6 1497 aa24.85■■□□□ 1.57
NELFA-213ENST00000467661 KIAA1107Q9UPP5 1409 aa24.85■■□□□ 1.57
NELFA-213ENST00000467661 RSPH4AQ5TD94 716 aa24.85■■□□□ 1.57
NELFA-213ENST00000467661 L3MBTL2Q969R5 705 aa24.85■■□□□ 1.57
NELFA-213ENST00000467661 MBD5Q9P267 1494 aa24.84■■□□□ 1.57
NELFA-213ENST00000467661 KDM5DQ9BY66 1539 aa24.84■■□□□ 1.57
NELFA-213ENST00000467661 MYO5CQ9NQX4 1742 aa24.83■■□□□ 1.57
NELFA-213ENST00000467661 TTC37Q6PGP7 1564 aa24.83■■□□□ 1.56
NELFA-213ENST00000467661 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.82■■□□□ 1.56
NELFA-213ENST00000467661 ASXL2Q76L83 1435 aa24.79■■□□□ 1.56
NELFA-213ENST00000467661 ARHGAP5Q13017 1502 aa24.79■■□□□ 1.56
NELFA-213ENST00000467661 ANP32CO43423 234 aa24.79■■□□□ 1.56
NELFA-213ENST00000467661 EIF4G2P78344 907 aaKnown RBP eCLIP24.79■■□□□ 1.56
NELFA-213ENST00000467661 MAST1Q9Y2H9 1570 aa24.79■■□□□ 1.56
NELFA-213ENST00000467661 PLEKHH2Q8IVE3 1493 aa24.78■■□□□ 1.56
NELFA-213ENST00000467661 KIF15Q9NS87 1388 aa24.78■■□□□ 1.56
NELFA-213ENST00000467661 HNRNPMP52272 730 aaKnown RBP eCLIP24.78■■□□□ 1.56
NELFA-213ENST00000467661 CCER2I3L3R5 266 aa24.76■■□□□ 1.55
NELFA-213ENST00000467661 HSPA5P11021 654 aaKnown RBP24.76■■□□□ 1.55
NELFA-213ENST00000467661 WDR7Q9Y4E6 1490 aa24.75■■□□□ 1.55
NELFA-213ENST00000467661 SYCP2Q9BX26 1530 aa24.74■■□□□ 1.55
NELFA-213ENST00000467661 PKD2Q13563 968 aa24.74■■□□□ 1.55
NELFA-213ENST00000467661 NUP155O75694 1391 aa24.74■■□□□ 1.55
NELFA-213ENST00000467661 KIF13AQ9H1H9 1805 aa24.69■■□□□ 1.54
NELFA-213ENST00000467661 PLXNC1O60486 1568 aa24.69■■□□□ 1.54
NELFA-213ENST00000467661 DIP2BQ9P265 1576 aa24.67■■□□□ 1.54
NELFA-213ENST00000467661 POLR1AO95602 1720 aaPredicted RBP24.67■■□□□ 1.54
NELFA-213ENST00000467661 NBPF8Q3BBV2 869 aa24.66■■□□□ 1.54
NELFA-213ENST00000467661 UNC13BO14795 1591 aa24.65■■□□□ 1.54
NELFA-213ENST00000467661 WASHC2AQ641Q2 1341 aa24.64■■□□□ 1.54
NELFA-213ENST00000467661 KCNH8Q96L42 1107 aa24.64■■□□□ 1.54
NELFA-213ENST00000467661 PLCH2O75038 1416 aa24.64■■□□□ 1.54
NELFA-213ENST00000467661 ARHGEF12Q9NZN5 1544 aa24.63■■□□□ 1.53
NELFA-213ENST00000467661 FAM135AQ9P2D6 1515 aa24.61■■□□□ 1.53
NELFA-213ENST00000467661 GLI2P10070 1586 aa24.61■■□□□ 1.53
NELFA-213ENST00000467661 ABCA9Q8IUA7 1624 aa24.6■■□□□ 1.53
NELFA-213ENST00000467661 ARAP3Q8WWN8 1544 aa24.59■■□□□ 1.53
NELFA-213ENST00000467661 SPATA31E1Q6ZUB1 1445 aa24.59■■□□□ 1.53
NELFA-213ENST00000467661 CNTLNQ9NXG0 1405 aa24.59■■□□□ 1.53
NELFA-213ENST00000467661 DUOX2Q9NRD8 1548 aa24.58■■□□□ 1.53
NELFA-213ENST00000467661 ABCC1P33527 1531 aa24.58■■□□□ 1.52
NELFA-213ENST00000467661 EFCAB2Q5VUJ9 269 aa24.58■■□□□ 1.52
NELFA-213ENST00000467661 UHRF1BP1Q6BDS2 1440 aa24.57■■□□□ 1.52
NELFA-213ENST00000467661 CCDC7Q96M83 1385 aa24.57■■□□□ 1.52
NELFA-213ENST00000467661 MAP3K4Q9Y6R4 1608 aa24.56■■□□□ 1.52
NELFA-213ENST00000467661 FAM69CQ0P6D2 419 aa24.55■■□□□ 1.52
NELFA-213ENST00000467661 IQGAP3Q86VI3 1631 aa24.54■■□□□ 1.52
NELFA-213ENST00000467661 ERBINQ96RT1 1412 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms