RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 DNMT1P26358 1616 aaKnown RBP21.03■□□□□ 0.96
PRPF38B-204ENST00000467302 KCNH8Q96L42 1107 aa21■□□□□ 0.95
PRPF38B-204ENST00000467302 UACAQ9BZF9 1416 aa20.98■□□□□ 0.95
PRPF38B-204ENST00000467302 GPATCH8Q9UKJ3 1502 aaKnown RBP20.98■□□□□ 0.95
PRPF38B-204ENST00000467302 ERCC6L2Q5T890 1561 aa20.98■□□□□ 0.95
PRPF38B-204ENST00000467302 DAPK1P53355 1430 aa20.97■□□□□ 0.95
PRPF38B-204ENST00000467302 PPP1R15AO75807 674 aaPredicted RBP20.97■□□□□ 0.95
PRPF38B-204ENST00000467302 PLEKHD1A6NEE1 506 aa20.97■□□□□ 0.95
PRPF38B-204ENST00000467302 CAMSAP2Q08AD1 1489 aa20.96■□□□□ 0.95
PRPF38B-204ENST00000467302 CDC42BPAQ5VT25 1732 aa20.95■□□□□ 0.94
PRPF38B-204ENST00000467302 ABCC10Q5T3U5 1492 aa20.95■□□□□ 0.94
PRPF38B-204ENST00000467302 ABCC2Q92887 1545 aa20.95■□□□□ 0.94
PRPF38B-204ENST00000467302 DDX10Q13206 875 aaKnown RBP20.94■□□□□ 0.94
PRPF38B-204ENST00000467302 ROCK1Q13464 1354 aa20.94■□□□□ 0.94
PRPF38B-204ENST00000467302 CHIC2Q9UKJ5 165 aa20.94■□□□□ 0.94
PRPF38B-204ENST00000467302 ABCC5O15440 1437 aa20.92■□□□□ 0.94
PRPF38B-204ENST00000467302 CROCC2H7BZ55 1655 aa20.91■□□□□ 0.94
PRPF38B-204ENST00000467302 RRP7BPQ9NSQ0 103 aa20.91■□□□□ 0.94
PRPF38B-204ENST00000467302 CFDP1Q9UEE9 299 aaPredicted RBP20.9■□□□□ 0.94
PRPF38B-204ENST00000467302 ADGBQ8N7X0 1667 aa20.9■□□□□ 0.94
PRPF38B-204ENST00000467302 ZNF644Q9H582 1327 aaPredicted RBP20.87■□□□□ 0.93
PRPF38B-204ENST00000467302 UHRF1BP1LA0JNW5 1464 aa20.86■□□□□ 0.93
PRPF38B-204ENST00000467302 KDM6BO15054 1643 aa20.86■□□□□ 0.93
PRPF38B-204ENST00000467302 PREX2Q70Z35 1606 aa20.84■□□□□ 0.93
PRPF38B-204ENST00000467302 ADGRL2O95490 1459 aa20.83■□□□□ 0.92
PRPF38B-204ENST00000467302 CCER2I3L3R5 266 aa20.82■□□□□ 0.92
PRPF38B-204ENST00000467302 TONSLQ96HA7 1378 aa20.81■□□□□ 0.92
PRPF38B-204ENST00000467302 ZCCHC11Q5TAX3 1644 aaKnown RBP20.81■□□□□ 0.92
PRPF38B-204ENST00000467302 SHANK2Q9UPX8 1470 aa20.81■□□□□ 0.92
PRPF38B-204ENST00000467302 HIRIP3Q9BW71 556 aaPredicted RBP20.8■□□□□ 0.92
PRPF38B-204ENST00000467302 ZNF777Q9ULD5 760 aaPredicted RBP20.78■□□□□ 0.92
PRPF38B-204ENST00000467302 CDC42BPBQ9Y5S2 1711 aa20.78■□□□□ 0.92
PRPF38B-204ENST00000467302 ARHGEF5Q12774 1597 aa20.78■□□□□ 0.92
PRPF38B-204ENST00000467302 TRIM52Q96A61 297 aa20.78■□□□□ 0.92
PRPF38B-204ENST00000467302 KDM5BQ9UGL1 1544 aa20.77■□□□□ 0.92
PRPF38B-204ENST00000467302 TTC37Q6PGP7 1564 aa20.77■□□□□ 0.91
PRPF38B-204ENST00000467302 TSHZ2Q9NRE2 1034 aa20.77■□□□□ 0.91
PRPF38B-204ENST00000467302 NCOA1Q15788 1441 aa20.75■□□□□ 0.91
PRPF38B-204ENST00000467302 MYO5CQ9NQX4 1742 aa20.75■□□□□ 0.91
PRPF38B-204ENST00000467302 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.75■□□□□ 0.91
PRPF38B-204ENST00000467302 ANP32CO43423 234 aa20.75■□□□□ 0.91
PRPF38B-204ENST00000467302 SAMD9LQ8IVG5 1584 aa20.74■□□□□ 0.91
PRPF38B-204ENST00000467302 DENND4BO75064 1496 aaPredicted RBP20.73■□□□□ 0.91
PRPF38B-204ENST00000467302 ANKRD30AQ9BXX3 1397 aa20.73■□□□□ 0.91
PRPF38B-204ENST00000467302 C9orf84Q5VXU9 1444 aa20.71■□□□□ 0.91
PRPF38B-204ENST00000467302 ARHGAP5Q13017 1502 aa20.69■□□□□ 0.9
PRPF38B-204ENST00000467302 MPHOSPH9Q99550 1183 aa20.69■□□□□ 0.9
PRPF38B-204ENST00000467302 MBD5Q9P267 1494 aa20.69■□□□□ 0.9
PRPF38B-204ENST00000467302 CCDC141Q6ZP82 1450 aa20.68■□□□□ 0.9
PRPF38B-204ENST00000467302 FKBP8Q14318 412 aa20.66■□□□□ 0.9
PRPF38B-204ENST00000467302 PLEKHH2Q8IVE3 1493 aa20.65■□□□□ 0.9
PRPF38B-204ENST00000467302 MAST1Q9Y2H9 1570 aa20.64■□□□□ 0.89
PRPF38B-204ENST00000467302 SYCP2Q9BX26 1530 aa20.64■□□□□ 0.89
PRPF38B-204ENST00000467302 RSPH4AQ5TD94 716 aa20.63■□□□□ 0.89
PRPF38B-204ENST00000467302 TSPY4P0CV99 314 aa20.63■□□□□ 0.89
PRPF38B-204ENST00000467302 TSPY10P0CW01 314 aa20.63■□□□□ 0.89
PRPF38B-204ENST00000467302 ANKRD50Q9ULJ7 1429 aa20.62■□□□□ 0.89
PRPF38B-204ENST00000467302 OSCARQ8IYS5 282 aa20.61■□□□□ 0.89
PRPF38B-204ENST00000467302 PZPP20742 1482 aa20.61■□□□□ 0.89
PRPF38B-204ENST00000467302 KIAA1107Q9UPP5 1409 aa20.61■□□□□ 0.89
PRPF38B-204ENST00000467302 PLCH2O75038 1416 aa20.6■□□□□ 0.89
PRPF38B-204ENST00000467302 HNRNPMP52272 730 aaKnown RBP eCLIP20.6■□□□□ 0.89
PRPF38B-204ENST00000467302 BCANQ96GW7 911 aa20.6■□□□□ 0.89
PRPF38B-204ENST00000467302 ARAP3Q8WWN8 1544 aa20.59■□□□□ 0.89
PRPF38B-204ENST00000467302 WDR7Q9Y4E6 1490 aa20.58■□□□□ 0.89
PRPF38B-204ENST00000467302 SLC4A1APQ9BWU0 796 aaKnown RBP20.58■□□□□ 0.88
PRPF38B-204ENST00000467302 KIF15Q9NS87 1388 aa20.57■□□□□ 0.88
PRPF38B-204ENST00000467302 KDM5DQ9BY66 1539 aa20.57■□□□□ 0.88
PRPF38B-204ENST00000467302 ANKRD30BQ9BXX2 1392 aa20.56■□□□□ 0.88
PRPF38B-204ENST00000467302 PLXNC1O60486 1568 aa20.56■□□□□ 0.88
PRPF38B-204ENST00000467302 NEFLP07196 543 aa20.55■□□□□ 0.88
PRPF38B-204ENST00000467302 FOXD1Q16676 465 aa20.55■□□□□ 0.88
PRPF38B-204ENST00000467302 ABCC1P33527 1531 aa20.55■□□□□ 0.88
PRPF38B-204ENST00000467302 RPRD2Q5VT52 1461 aaKnown RBP20.54■□□□□ 0.88
PRPF38B-204ENST00000467302 WASHC2AQ641Q2 1341 aa20.53■□□□□ 0.88
PRPF38B-204ENST00000467302 HSPA5P11021 654 aaKnown RBP20.52■□□□□ 0.88
PRPF38B-204ENST00000467302 ABCA9Q8IUA7 1624 aa20.52■□□□□ 0.87
PRPF38B-204ENST00000467302 EFCAB2Q5VUJ9 269 aa20.5■□□□□ 0.87
PRPF38B-204ENST00000467302 ARHGEF12Q9NZN5 1544 aa20.49■□□□□ 0.87
PRPF38B-204ENST00000467302 UNC13BO14795 1591 aa20.46■□□□□ 0.87
PRPF38B-204ENST00000467302 TEX14Q8IWB6 1497 aa20.46■□□□□ 0.87
PRPF38B-204ENST00000467302 EIF4G2P78344 907 aaKnown RBP eCLIP20.46■□□□□ 0.87
PRPF38B-204ENST00000467302 ASXL2Q76L83 1435 aa20.46■□□□□ 0.87
PRPF38B-204ENST00000467302 NUP155O75694 1391 aa20.46■□□□□ 0.87
PRPF38B-204ENST00000467302 DUOX2Q9NRD8 1548 aa20.45■□□□□ 0.86
PRPF38B-204ENST00000467302 L3MBTL2Q969R5 705 aa20.44■□□□□ 0.86
PRPF38B-204ENST00000467302 PKD2Q13563 968 aa20.43■□□□□ 0.86
PRPF38B-204ENST00000467302 CNTLNQ9NXG0 1405 aa20.42■□□□□ 0.86
PRPF38B-204ENST00000467302 HNRNPUQ00839 825 aaKnown RBP eCLIP20.41■□□□□ 0.86
PRPF38B-204ENST00000467302 ERBINQ96RT1 1412 aa20.4■□□□□ 0.86
PRPF38B-204ENST00000467302 FAM135AQ9P2D6 1515 aa20.4■□□□□ 0.86
PRPF38B-204ENST00000467302 FANCAO15360 1455 aa20.4■□□□□ 0.86
PRPF38B-204ENST00000467302 ANP32EQ9BTT0 268 aa20.39■□□□□ 0.86
PRPF38B-204ENST00000467302 TRAPPC8Q9Y2L5 1435 aa20.39■□□□□ 0.86
PRPF38B-204ENST00000467302 NPM1P06748 294 aaKnown RBP eCLIP20.38■□□□□ 0.85
PRPF38B-204ENST00000467302 ZFYVE16Q7Z3T8 1539 aa20.38■□□□□ 0.85
PRPF38B-204ENST00000467302 RTEL1-TNFRSF6BF6WH68 1400 aa20.38■□□□□ 0.85
PRPF38B-204ENST00000467302 IQGAP3Q86VI3 1631 aa20.37■□□□□ 0.85
PRPF38B-204ENST00000467302 CCDC7Q96M83 1385 aa20.37■□□□□ 0.85
PRPF38B-204ENST00000467302 C11orf95C9JLR9 678 aaPredicted RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms