RNA–Protein interactions for RNA: ENST00000466742.5

ABCF3-206, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 2,331 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-206ENST00000466742 SALL2Q9Y467 1007 aaPredicted RBP21.79■■□□□ 1.08
ABCF3-206ENST00000466742 MIA2Q96PC5 1412 aa21.78■■□□□ 1.08
ABCF3-206ENST00000466742 NEFLP07196 543 aa21.76■■□□□ 1.07
ABCF3-206ENST00000466742 TCOF1Q13428 1488 aaKnown RBP21.75■■□□□ 1.07
ABCF3-206ENST00000466742 PLEKHD1A6NEE1 506 aa21.73■■□□□ 1.07
ABCF3-206ENST00000466742 PTPN23Q9H3S7 1636 aa21.72■■□□□ 1.07
ABCF3-206ENST00000466742 OSCARQ8IYS5 282 aa21.71■■□□□ 1.07
ABCF3-206ENST00000466742 ABCC2Q92887 1545 aa21.7■■□□□ 1.07
ABCF3-206ENST00000466742 ADCY10Q96PN6 1610 aa21.7■■□□□ 1.06
ABCF3-206ENST00000466742 SETD5Q9C0A6 1442 aa21.69■■□□□ 1.06
ABCF3-206ENST00000466742 UHRF1BP1LA0JNW5 1464 aa21.67■■□□□ 1.06
ABCF3-206ENST00000466742 RAB3GAP2Q9H2M9 1393 aa21.66■■□□□ 1.06
ABCF3-206ENST00000466742 PTPRKQ15262 1439 aa21.65■■□□□ 1.06
ABCF3-206ENST00000466742 KCNH8Q96L42 1107 aa21.64■■□□□ 1.06
ABCF3-206ENST00000466742 DHX57Q6P158 1386 aaKnown RBP21.64■■□□□ 1.06
ABCF3-206ENST00000466742 KIF14Q15058 1648 aa21.63■■□□□ 1.05
ABCF3-206ENST00000466742 GPATCH8Q9UKJ3 1502 aaKnown RBP21.63■■□□□ 1.05
ABCF3-206ENST00000466742 ABCC10Q5T3U5 1492 aa21.62■■□□□ 1.05
ABCF3-206ENST00000466742 HFM1A2PYH4 1435 aa21.59■■□□□ 1.05
ABCF3-206ENST00000466742 CFDP1Q9UEE9 299 aaPredicted RBP21.58■■□□□ 1.05
ABCF3-206ENST00000466742 KDM5BQ9UGL1 1544 aa21.58■■□□□ 1.05
ABCF3-206ENST00000466742 ITSN2Q9NZM3 1697 aa21.58■■□□□ 1.04
ABCF3-206ENST00000466742 CCDC136Q96JN2 1154 aa21.55■■□□□ 1.04
ABCF3-206ENST00000466742 AKNAQ7Z591 1439 aa21.55■■□□□ 1.04
ABCF3-206ENST00000466742 ZNF644Q9H582 1327 aaPredicted RBP21.54■■□□□ 1.04
ABCF3-206ENST00000466742 NAIPQ13075 1403 aa21.53■■□□□ 1.04
ABCF3-206ENST00000466742 DAPK1P53355 1430 aa21.52■■□□□ 1.04
ABCF3-206ENST00000466742 CAMSAP2Q08AD1 1489 aa21.52■■□□□ 1.03
ABCF3-206ENST00000466742 ABCC5O15440 1437 aa21.51■■□□□ 1.03
ABCF3-206ENST00000466742 DNMT1P26358 1616 aaKnown RBP21.5■■□□□ 1.03
ABCF3-206ENST00000466742 ZCCHC11Q5TAX3 1644 aaKnown RBP21.5■■□□□ 1.03
ABCF3-206ENST00000466742 ROCK1Q13464 1354 aa21.48■■□□□ 1.03
ABCF3-206ENST00000466742 CDC42BPAQ5VT25 1732 aa21.47■■□□□ 1.03
ABCF3-206ENST00000466742 CHIC2Q9UKJ5 165 aa21.46■■□□□ 1.03
ABCF3-206ENST00000466742 DNAJC5Q9H3Z4 198 aa21.45■■□□□ 1.02
ABCF3-206ENST00000466742 ZNF777Q9ULD5 760 aaPredicted RBP21.44■■□□□ 1.02
ABCF3-206ENST00000466742 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.44■■□□□ 1.02
ABCF3-206ENST00000466742 RRP7BPQ9NSQ0 103 aa21.43■■□□□ 1.02
ABCF3-206ENST00000466742 MAPKBP1O60336 1514 aa21.41■■□□□ 1.02
ABCF3-206ENST00000466742 NOP58Q9Y2X3 529 aaKnown RBP21.41■■□□□ 1.02
ABCF3-206ENST00000466742 PREX2Q70Z35 1606 aa21.41■■□□□ 1.02
ABCF3-206ENST00000466742 GCC2Q8IWJ2 1684 aa21.41■■□□□ 1.02
ABCF3-206ENST00000466742 TTC37Q6PGP7 1564 aa21.4■■□□□ 1.02
ABCF3-206ENST00000466742 IL27Q8NEV9 243 aa21.39■■□□□ 1.01
ABCF3-206ENST00000466742 ADGRL2O95490 1459 aa21.37■■□□□ 1.01
ABCF3-206ENST00000466742 WDR7Q9Y4E6 1490 aa21.36■■□□□ 1.01
ABCF3-206ENST00000466742 SHANK2Q9UPX8 1470 aa21.36■■□□□ 1.01
ABCF3-206ENST00000466742 NBR1Q14596 966 aa21.35■■□□□ 1.01
ABCF3-206ENST00000466742 CDC42BPBQ9Y5S2 1711 aa21.35■■□□□ 1.01
ABCF3-206ENST00000466742 MBD5Q9P267 1494 aa21.35■■□□□ 1.01
ABCF3-206ENST00000466742 NCOA1Q15788 1441 aa21.35■■□□□ 1.01
ABCF3-206ENST00000466742 PLCH2O75038 1416 aa21.34■■□□□ 1.01
ABCF3-206ENST00000466742 ARHGEF5Q12774 1597 aa21.34■■□□□ 1.01
ABCF3-206ENST00000466742 CCER2I3L3R5 266 aa21.34■■□□□ 1.01
ABCF3-206ENST00000466742 RSPH4AQ5TD94 716 aa21.34■■□□□ 1.01
ABCF3-206ENST00000466742 SAMD9LQ8IVG5 1584 aa21.34■■□□□ 1.01
ABCF3-206ENST00000466742 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.33■■□□□ 1.01
ABCF3-206ENST00000466742 ARHGAP5Q13017 1502 aa21.33■■□□□ 1
ABCF3-206ENST00000466742 CROCC2H7BZ55 1655 aa21.33■■□□□ 1
ABCF3-206ENST00000466742 ANKRD30AQ9BXX3 1397 aa21.31■■□□□ 1
ABCF3-206ENST00000466742 KIAA1107Q9UPP5 1409 aa21.31■■□□□ 1
ABCF3-206ENST00000466742 MYO5CQ9NQX4 1742 aa21.3■■□□□ 1
ABCF3-206ENST00000466742 PLEKHH2Q8IVE3 1493 aa21.3■■□□□ 1
ABCF3-206ENST00000466742 ASXL2Q76L83 1435 aa21.3■■□□□ 1
ABCF3-206ENST00000466742 C9orf84Q5VXU9 1444 aa21.29■■□□□ 1
ABCF3-206ENST00000466742 NPM1P06748 294 aaKnown RBP eCLIP21.29■■□□□ 1
ABCF3-206ENST00000466742 HNRNPMP52272 730 aaKnown RBP eCLIP21.29■■□□□ 1
ABCF3-206ENST00000466742 CCDC141Q6ZP82 1450 aa21.29■■□□□ 1
ABCF3-206ENST00000466742 TSPY4P0CV99 314 aa21.29■■□□□ 1
ABCF3-206ENST00000466742 TSPY10P0CW01 314 aa21.29■■□□□ 1
ABCF3-206ENST00000466742 ARAP3Q8WWN8 1544 aa21.29■■□□□ 1
ABCF3-206ENST00000466742 KDM6BO15054 1643 aa21.29■■□□□ 1
ABCF3-206ENST00000466742 ADGBQ8N7X0 1667 aa21.28■■□□□ 1
ABCF3-206ENST00000466742 EFCAB2Q5VUJ9 269 aa21.27■■□□□ 1
ABCF3-206ENST00000466742 TRIM52Q96A61 297 aa21.27■■□□□ 1
ABCF3-206ENST00000466742 PAK3O75914 559 aaPredicted RBP21.26■□□□□ 0.99
ABCF3-206ENST00000466742 RTL5Q5HYW3 569 aaPredicted RBP21.25■□□□□ 0.99
ABCF3-206ENST00000466742 SYCP2Q9BX26 1530 aa21.24■□□□□ 0.99
ABCF3-206ENST00000466742 EIF5BO60841 1220 aaKnown RBP21.23■□□□□ 0.99
ABCF3-206ENST00000466742 RTN4Q9NQC3 1192 aaKnown RBP21.23■□□□□ 0.99
ABCF3-206ENST00000466742 ABCA9Q8IUA7 1624 aa21.22■□□□□ 0.99
ABCF3-206ENST00000466742 TIMELESSQ9UNS1 1208 aa21.22■□□□□ 0.99
ABCF3-206ENST00000466742 ANKRD50Q9ULJ7 1429 aa21.2■□□□□ 0.98
ABCF3-206ENST00000466742 PPP4R2Q9NY27 417 aa21.2■□□□□ 0.98
ABCF3-206ENST00000466742 PKNOX2Q96KN3 472 aa21.2■□□□□ 0.98
ABCF3-206ENST00000466742 PPP1R15AO75807 674 aaPredicted RBP21.19■□□□□ 0.98
ABCF3-206ENST00000466742 SIN3AQ96ST3 1273 aa21.19■□□□□ 0.98
ABCF3-206ENST00000466742 MAST1Q9Y2H9 1570 aa21.19■□□□□ 0.98
ABCF3-206ENST00000466742 ARHGEF12Q9NZN5 1544 aa21.19■□□□□ 0.98
ABCF3-206ENST00000466742 DENND4BO75064 1496 aaPredicted RBP21.18■□□□□ 0.98
ABCF3-206ENST00000466742 DDX10Q13206 875 aaKnown RBP21.18■□□□□ 0.98
ABCF3-206ENST00000466742 MPHOSPH9Q99550 1183 aa21.18■□□□□ 0.98
ABCF3-206ENST00000466742 ABCC1P33527 1531 aa21.18■□□□□ 0.98
ABCF3-206ENST00000466742 C11orf95C9JLR9 678 aaPredicted RBP21.18■□□□□ 0.98
ABCF3-206ENST00000466742 KIF15Q9NS87 1388 aa21.17■□□□□ 0.98
ABCF3-206ENST00000466742 SLC24A1O60721 1099 aa21.17■□□□□ 0.98
ABCF3-206ENST00000466742 WASHC2AQ641Q2 1341 aa21.17■□□□□ 0.98
ABCF3-206ENST00000466742 RIMBP3CA6NJZ7 1639 aa21.14■□□□□ 0.98
ABCF3-206ENST00000466742 RIMBP3BA6NNM3 1639 aa21.14■□□□□ 0.98
ABCF3-206ENST00000466742 RIMBP3Q9UFD9 1639 aa21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms