RNA–Protein interactions for RNA: ENST00000462944.1

MDH1-209, Transcript of malate dehydrogenase 1, humanhuman

TSL 3

Gene MDH1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-209ENST00000462944 PREX1Q8TCU6 1659 aa15.41■□□□□ 0.06
MDH1-209ENST00000462944 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.39■□□□□ 0.056e-11■■■□□ 18.1
MDH1-209ENST00000462944 EEA1Q15075 1411 aa15.38■□□□□ 0.05
MDH1-209ENST00000462944 CSRNP3Q8WYN3 585 aa15.36■□□□□ 0.05
MDH1-209ENST00000462944 SIGLEC1Q9BZZ2 1709 aa15.36■□□□□ 0.05
MDH1-209ENST00000462944 MYO5CQ9NQX4 1742 aa15.36■□□□□ 0.05
MDH1-209ENST00000462944 HECW1Q76N89 1606 aa15.35■□□□□ 0.05
MDH1-209ENST00000462944 CERKQ8TCT0 537 aa15.33■□□□□ 0.04
MDH1-209ENST00000462944 ARHGEF12Q9NZN5 1544 aa15.32■□□□□ 0.04
MDH1-209ENST00000462944 ATP10AO60312 1499 aa15.3■□□□□ 0.04
MDH1-209ENST00000462944 PLCH2O75038 1416 aa15.3■□□□□ 0.04
MDH1-209ENST00000462944 C9orf84Q5VXU9 1444 aa15.3■□□□□ 0.04
MDH1-209ENST00000462944 YEATS2Q9ULM3 1422 aa15.3■□□□□ 0.04
MDH1-209ENST00000462944 DMRT2Q9Y5R5 561 aa15.3■□□□□ 0.04
MDH1-209ENST00000462944 HSPA2P54652 639 aa15.29■□□□□ 0.04
MDH1-209ENST00000462944 STRCQ7RTU9 1775 aa15.29■□□□□ 0.04
MDH1-209ENST00000462944 SCAPERQ9BY12 1400 aa15.27■□□□□ 0.04
MDH1-209ENST00000462944 REREQ9P2R6 1566 aa15.26■□□□□ 0.03
MDH1-209ENST00000462944 ZNF518AQ6AHZ1 1483 aa15.26■□□□□ 0.03
MDH1-209ENST00000462944 KDM5CP41229 1560 aa15.24■□□□□ 0.03
MDH1-209ENST00000462944 KIF14Q15058 1648 aa15.24■□□□□ 0.03
MDH1-209ENST00000462944 EFCAB2Q5VUJ9 269 aa15.23■□□□□ 0.03
MDH1-209ENST00000462944 UHRF1BP1Q6BDS2 1440 aa15.23■□□□□ 0.03
MDH1-209ENST00000462944 CDK11AQ9UQ88 783 aaPredicted RBP15.22■□□□□ 0.03
MDH1-209ENST00000462944 FMN1Q68DA7 1419 aa15.22■□□□□ 0.03
MDH1-209ENST00000462944 CDK13Q14004 1512 aaKnown RBP15.22■□□□□ 0.03
MDH1-209ENST00000462944 C3P01024 1663 aa15.21■□□□□ 0.03
MDH1-209ENST00000462944 IQSEC2Q5JU85 1478 aa15.2■□□□□ 0.02
MDH1-209ENST00000462944 MLECQ14165 292 aa15.2■□□□□ 0.02
MDH1-209ENST00000462944 PTPRTO14522 1441 aa15.19■□□□□ 0.02
MDH1-209ENST00000462944 CDC42BPBQ9Y5S2 1711 aa15.18■□□□□ 0.02
MDH1-209ENST00000462944 DIP2CQ9Y2E4 1556 aa15.17■□□□□ 0.02
MDH1-209ENST00000462944 AGLP35573 1532 aa15.17■□□□□ 0.02
MDH1-209ENST00000462944 ARHGAP5Q13017 1502 aa15.17■□□□□ 0.02
MDH1-209ENST00000462944 CLIP1P30622 1438 aa15.17■□□□□ 0.02
MDH1-209ENST00000462944 DISP3Q9P2K9 1392 aa15.16■□□□□ 0.02
MDH1-209ENST00000462944 SOCS7O14512 581 aa15.16■□□□□ 0.02
MDH1-209ENST00000462944 MROH2AA6NES4 1674 aa15.16■□□□□ 0.02
MDH1-209ENST00000462944 SPATA31D1Q6ZQQ2 1576 aa15.15■□□□□ 0.02
MDH1-209ENST00000462944 MLH3Q9UHC1 1453 aa15.15■□□□□ 0.02
MDH1-209ENST00000462944 RANGAP1P46060 587 aaPredicted RBP15.15■□□□□ 0.02
MDH1-209ENST00000462944 TROQ12816 1431 aaPredicted RBP15.14■□□□□ 0.01
MDH1-209ENST00000462944 PREX2Q70Z35 1606 aa15.14■□□□□ 0.01
MDH1-209ENST00000462944 ABCA6Q8N139 1617 aa15.14■□□□□ 0.01
MDH1-209ENST00000462944 ITSN2Q9NZM3 1697 aa15.13■□□□□ 0.01
MDH1-209ENST00000462944 CNTLNQ9NXG0 1405 aa15.13■□□□□ 0.01
MDH1-209ENST00000462944 LRRIQ1Q96JM4 1722 aa15.12■□□□□ 0.01
MDH1-209ENST00000462944 ESF1Q9H501 851 aaKnown RBP15.11■□□□□ 0.01
MDH1-209ENST00000462944 SUPT6HQ7KZ85 1726 aaKnown RBP15.11■□□□□ 0.01
MDH1-209ENST00000462944 TRAPPC8Q9Y2L5 1435 aa15.1■□□□□ 0.01
MDH1-209ENST00000462944 CEBPAP49715 358 aaPredicted RBP15.1■□□□□ 0.01
MDH1-209ENST00000462944 LTBP4Q8N2S1 1624 aa15.1■□□□□ 0.01
MDH1-209ENST00000462944 KIDINS220Q9ULH0 1771 aa15.09■□□□□ 0.01
MDH1-209ENST00000462944 ABCC1P33527 1531 aa15.09■□□□□ 0.01
MDH1-209ENST00000462944 CDC42BPAQ5VT25 1732 aa15.08■□□□□ 0
MDH1-209ENST00000462944 NPATQ14207 1427 aa15.08■□□□□ 0
MDH1-209ENST00000462944 AFAP1Q8N556 730 aa15.07■□□□□ 0
MDH1-209ENST00000462944 MYT1LQ9UL68 1186 aa15.07■□□□□ 0
MDH1-209ENST00000462944 CCDC18Q5T9S5 1454 aa15.07■□□□□ 0
MDH1-209ENST00000462944 ARHGAP35Q9NRY4 1499 aa15.07■□□□□ 0
MDH1-209ENST00000462944 ILDR2Q71H61 639 aa15.06■□□□□ 0
MDH1-209ENST00000462944 NCOA1Q15788 1441 aa15.06■□□□□ 0
MDH1-209ENST00000462944 ZNF142P52746 1687 aaPredicted RBP15.06■□□□□ 0
MDH1-209ENST00000462944 ATP1B4Q9UN42 357 aaPredicted RBP15.05■□□□□ -0
MDH1-209ENST00000462944 CAMSAP1Q5T5Y3 1602 aa15.03■□□□□ -0
MDH1-209ENST00000462944 UBTFP17480 764 aaKnown RBP15.01□□□□□ -0.01
MDH1-209ENST00000462944 MAPK8IP2Q13387 824 aaPredicted RBP15.01□□□□□ -0.01
MDH1-209ENST00000462944 PLA2R1Q13018 1463 aa15.01□□□□□ -0.01
MDH1-209ENST00000462944 SAMD9LQ8IVG5 1584 aa14.99□□□□□ -0.01
MDH1-209ENST00000462944 MYO3AQ8NEV4 1616 aa14.99□□□□□ -0.01
MDH1-209ENST00000462944 CLTCQ00610 1675 aaKnown RBP14.98□□□□□ -0.01
MDH1-209ENST00000462944 SCAF1Q9H7N4 1312 aaKnown RBP14.97□□□□□ -0.01
MDH1-209ENST00000462944 ADGBQ8N7X0 1667 aa14.97□□□□□ -0.01
MDH1-209ENST00000462944 CASKIN1Q8WXD9 1431 aa14.97□□□□□ -0.01
MDH1-209ENST00000462944 PKD2Q13563 968 aa14.96□□□□□ -0.01
MDH1-209ENST00000462944 PLEKHH2Q8IVE3 1493 aa14.95□□□□□ -0.02
MDH1-209ENST00000462944 PLXNC1O60486 1568 aa14.95□□□□□ -0.02
MDH1-209ENST00000462944 CEP170BQ9Y4F5 1589 aaPredicted RBP14.95□□□□□ -0.02
MDH1-209ENST00000462944 ZMYM3Q14202 1370 aa14.95□□□□□ -0.02
MDH1-209ENST00000462944 POLR1AO95602 1720 aaPredicted RBP14.95□□□□□ -0.02
MDH1-209ENST00000462944 INO80Q9ULG1 1556 aaPredicted RBP14.94□□□□□ -0.02
MDH1-209ENST00000462944 ATP7AQ04656 1500 aa14.94□□□□□ -0.02
MDH1-209ENST00000462944 FYCO1Q9BQS8 1478 aa14.93□□□□□ -0.02
MDH1-209ENST00000462944 KIAA1107Q9UPP5 1409 aa14.92□□□□□ -0.02
MDH1-209ENST00000462944 SYCP2Q9BX26 1530 aa14.92□□□□□ -0.02
MDH1-209ENST00000462944 TCOF1Q13428 1488 aaKnown RBP14.92□□□□□ -0.02
MDH1-209ENST00000462944 SPAG9O60271 1321 aaKnown RBP14.91□□□□□ -0.02
MDH1-209ENST00000462944 FAM135AQ9P2D6 1515 aa14.9□□□□□ -0.02
MDH1-209ENST00000462944 A2MP01023 1474 aa14.89□□□□□ -0.03
MDH1-209ENST00000462944 PTPRKQ15262 1439 aa14.88□□□□□ -0.03
MDH1-209ENST00000462944 CPS1P31327 1500 aa14.87□□□□□ -0.03
MDH1-209ENST00000462944 GPATCH8Q9UKJ3 1502 aaKnown RBP14.87□□□□□ -0.03
MDH1-209ENST00000462944 UBAP1LF5GYI3 381 aa14.87□□□□□ -0.03
MDH1-209ENST00000462944 DNMT1P26358 1616 aaKnown RBP14.86□□□□□ -0.03
MDH1-209ENST00000462944 A2ML1A8K2U0 1454 aa14.86□□□□□ -0.03
MDH1-209ENST00000462944 ZNF335Q9H4Z2 1342 aaPredicted RBP14.86□□□□□ -0.03
MDH1-209ENST00000462944 NCKAP5LQ9HCH0 1330 aa14.85□□□□□ -0.03
MDH1-209ENST00000462944 ZNF777Q9ULD5 760 aaPredicted RBP14.83□□□□□ -0.04
MDH1-209ENST00000462944 RTEL1-TNFRSF6BF6WH68 1400 aa14.82□□□□□ -0.04
MDH1-209ENST00000462944 MED1Q15648 1581 aaPredicted RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms