RNA–Protein interactions for RNA: ENST00000449844.6

NPAS1-202, Transcript of neuronal PAS domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS1, Length 2,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1-202ENST00000449844 ZNF644Q9H582 1327 aaPredicted RBP31.54■■■□□ 2.64
NPAS1-202ENST00000449844 TIMELESSQ9UNS1 1208 aa31.54■■■□□ 2.64
NPAS1-202ENST00000449844 CHIC2Q9UKJ5 165 aa31.53■■■□□ 2.64
NPAS1-202ENST00000449844 CENPBP07199 599 aaPredicted RBP31.53■■■□□ 2.64
NPAS1-202ENST00000449844 ZCCHC11Q5TAX3 1644 aaKnown RBP31.51■■■□□ 2.64
NPAS1-202ENST00000449844 ABCC5O15440 1437 aa31.5■■■□□ 2.63
NPAS1-202ENST00000449844 OSCARQ8IYS5 282 aa31.5■■■□□ 2.63
NPAS1-202ENST00000449844 ACIN1Q9UKV3 1341 aaKnown RBP31.5■■■□□ 2.63
NPAS1-202ENST00000449844 MIER1Q8N108 512 aa31.48■■■□□ 2.63
NPAS1-202ENST00000449844 RRP7BPQ9NSQ0 103 aa31.48■■■□□ 2.63
NPAS1-202ENST00000449844 KDM5BQ9UGL1 1544 aa31.46■■■□□ 2.63
NPAS1-202ENST00000449844 ZNF777Q9ULD5 760 aaPredicted RBP31.46■■■□□ 2.63
NPAS1-202ENST00000449844 CROCC2H7BZ55 1655 aa31.44■■■□□ 2.62
NPAS1-202ENST00000449844 ROCK1Q13464 1354 aa31.44■■■□□ 2.62
NPAS1-202ENST00000449844 PREX2Q70Z35 1606 aa31.43■■■□□ 2.62
NPAS1-202ENST00000449844 SIN3AQ96ST3 1273 aa31.42■■■□□ 2.62
NPAS1-202ENST00000449844 SCAF1Q9H7N4 1312 aaKnown RBP31.41■■■□□ 2.62
NPAS1-202ENST00000449844 ADGBQ8N7X0 1667 aa31.41■■■□□ 2.62
NPAS1-202ENST00000449844 CDC42BPBQ9Y5S2 1711 aa31.39■■■□□ 2.62
NPAS1-202ENST00000449844 NEUROD1Q13562 356 aa31.39■■■□□ 2.62
NPAS1-202ENST00000449844 TTC37Q6PGP7 1564 aa31.39■■■□□ 2.62
NPAS1-202ENST00000449844 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.38■■■□□ 2.61
NPAS1-202ENST00000449844 KDM6BO15054 1643 aa31.37■■■□□ 2.61
NPAS1-202ENST00000449844 MYO5CQ9NQX4 1742 aa31.34■■■□□ 2.61
NPAS1-202ENST00000449844 SAMD9LQ8IVG5 1584 aa31.3■■■□□ 2.6
NPAS1-202ENST00000449844 ADGRL2O95490 1459 aa31.29■■■□□ 2.6
NPAS1-202ENST00000449844 ARHGEF5Q12774 1597 aa31.28■■■□□ 2.6
NPAS1-202ENST00000449844 ARHGAP5Q13017 1502 aa31.27■■■□□ 2.6
NPAS1-202ENST00000449844 SHANK2Q9UPX8 1470 aa31.27■■■□□ 2.6
NPAS1-202ENST00000449844 KCNH8Q96L42 1107 aa31.27■■■□□ 2.6
NPAS1-202ENST00000449844 NCOA1Q15788 1441 aa31.24■■■□□ 2.59
NPAS1-202ENST00000449844 PPP1R15AO75807 674 aaPredicted RBP31.24■■■□□ 2.59
NPAS1-202ENST00000449844 ANKRD30AQ9BXX3 1397 aa31.22■■■□□ 2.59
NPAS1-202ENST00000449844 TRIM52Q96A61 297 aa31.22■■■□□ 2.59
NPAS1-202ENST00000449844 C9orf84Q5VXU9 1444 aa31.2■■■□□ 2.59
NPAS1-202ENST00000449844 TONSLQ96HA7 1378 aa31.19■■■□□ 2.58
NPAS1-202ENST00000449844 MBD5Q9P267 1494 aa31.19■■■□□ 2.58
NPAS1-202ENST00000449844 WDR7Q9Y4E6 1490 aa31.19■■■□□ 2.58
NPAS1-202ENST00000449844 CCDC141Q6ZP82 1450 aa31.18■■■□□ 2.58
NPAS1-202ENST00000449844 HNRNPMP52272 730 aaKnown RBP eCLIP31.17■■■□□ 2.58
NPAS1-202ENST00000449844 SYCP2Q9BX26 1530 aa31.16■■■□□ 2.58
NPAS1-202ENST00000449844 TSPY4P0CV99 314 aa31.15■■■□□ 2.58
NPAS1-202ENST00000449844 TSPY10P0CW01 314 aa31.15■■■□□ 2.58
NPAS1-202ENST00000449844 PLCH2O75038 1416 aa31.14■■■□□ 2.58
NPAS1-202ENST00000449844 PLEKHH2Q8IVE3 1493 aa31.14■■■□□ 2.58
NPAS1-202ENST00000449844 YTHDC1Q96MU7 727 aaKnown RBP31.12■■■□□ 2.57
NPAS1-202ENST00000449844 RSPH4AQ5TD94 716 aa31.11■■■□□ 2.57
NPAS1-202ENST00000449844 DENND4BO75064 1496 aaPredicted RBP31.1■■■□□ 2.57
NPAS1-202ENST00000449844 KIAA1107Q9UPP5 1409 aa31.08■■■□□ 2.57
NPAS1-202ENST00000449844 MPHOSPH9Q99550 1183 aa31.08■■■□□ 2.57
NPAS1-202ENST00000449844 ASXL2Q76L83 1435 aa31.06■■■□□ 2.56
NPAS1-202ENST00000449844 ARAP3Q8WWN8 1544 aa31.06■■■□□ 2.56
NPAS1-202ENST00000449844 ANKRD50Q9ULJ7 1429 aa31.06■■■□□ 2.56
NPAS1-202ENST00000449844 MAST1Q9Y2H9 1570 aa31.06■■■□□ 2.56
NPAS1-202ENST00000449844 ABCA9Q8IUA7 1624 aa31.04■■■□□ 2.56
NPAS1-202ENST00000449844 EFCAB2Q5VUJ9 269 aa31.04■■■□□ 2.56
NPAS1-202ENST00000449844 NPM1P06748 294 aaKnown RBP eCLIP31.03■■■□□ 2.56
NPAS1-202ENST00000449844 ABCC1P33527 1531 aa31.02■■■□□ 2.56
NPAS1-202ENST00000449844 KIF15Q9NS87 1388 aa31.01■■■□□ 2.56
NPAS1-202ENST00000449844 GTF3C3Q9Y5Q9 886 aa31■■■□□ 2.55
NPAS1-202ENST00000449844 ARHGEF12Q9NZN5 1544 aa30.98■■■□□ 2.55
NPAS1-202ENST00000449844 PZPP20742 1482 aa30.96■■■□□ 2.55
NPAS1-202ENST00000449844 SLC4A1APQ9BWU0 796 aaKnown RBP30.95■■■□□ 2.54
NPAS1-202ENST00000449844 PLXNC1O60486 1568 aa30.94■■■□□ 2.54
NPAS1-202ENST00000449844 FOXD1Q16676 465 aa30.89■■■□□ 2.54
NPAS1-202ENST00000449844 FANCAO15360 1455 aa30.89■■■□□ 2.53
NPAS1-202ENST00000449844 KDM5DQ9BY66 1539 aa30.87■■■□□ 2.53
NPAS1-202ENST00000449844 ANKRD30BQ9BXX2 1392 aa30.86■■■□□ 2.53
NPAS1-202ENST00000449844 TRAPPC8Q9Y2L5 1435 aa30.85■■■□□ 2.53
NPAS1-202ENST00000449844 RIMBP3CA6NJZ7 1639 aa30.85■■■□□ 2.53
NPAS1-202ENST00000449844 RIMBP3BA6NNM3 1639 aa30.85■■■□□ 2.53
NPAS1-202ENST00000449844 RIMBP3Q9UFD9 1639 aa30.85■■■□□ 2.53
NPAS1-202ENST00000449844 DDX10Q13206 875 aaKnown RBP30.84■■■□□ 2.53
NPAS1-202ENST00000449844 NUP155O75694 1391 aa30.83■■■□□ 2.53
NPAS1-202ENST00000449844 DUOX2Q9NRD8 1548 aa30.81■■■□□ 2.52
NPAS1-202ENST00000449844 RPRD2Q5VT52 1461 aaKnown RBP30.79■■■□□ 2.52
NPAS1-202ENST00000449844 ADGRL1O94910 1474 aa30.77■■■□□ 2.52
NPAS1-202ENST00000449844 UNC13BO14795 1591 aa30.77■■■□□ 2.52
NPAS1-202ENST00000449844 PKD2Q13563 968 aa30.75■■■□□ 2.51
NPAS1-202ENST00000449844 HIRIP3Q9BW71 556 aaPredicted RBP30.75■■■□□ 2.51
NPAS1-202ENST00000449844 ZFYVE16Q7Z3T8 1539 aa30.75■■■□□ 2.51
NPAS1-202ENST00000449844 SPAG9O60271 1321 aaKnown RBP30.74■■■□□ 2.51
NPAS1-202ENST00000449844 CFAP74Q9C0B2 1584 aa30.74■■■□□ 2.51
NPAS1-202ENST00000449844 RTEL1-TNFRSF6BF6WH68 1400 aa30.74■■■□□ 2.51
NPAS1-202ENST00000449844 ERBINQ96RT1 1412 aa30.73■■■□□ 2.51
NPAS1-202ENST00000449844 CYB5RLQ6IPT4 315 aa30.72■■■□□ 2.51
NPAS1-202ENST00000449844 CD109Q6YHK3 1445 aa30.71■■■□□ 2.51
NPAS1-202ENST00000449844 SCAPERQ9BY12 1400 aa30.71■■■□□ 2.51
NPAS1-202ENST00000449844 AFAP1Q8N556 730 aa30.71■■■□□ 2.51
NPAS1-202ENST00000449844 L3MBTL2Q969R5 705 aa30.71■■■□□ 2.51
NPAS1-202ENST00000449844 FAM135AQ9P2D6 1515 aa30.71■■■□□ 2.51
NPAS1-202ENST00000449844 INO80Q9ULG1 1556 aaPredicted RBP30.69■■■□□ 2.5
NPAS1-202ENST00000449844 TEX14Q8IWB6 1497 aa30.68■■■□□ 2.5
NPAS1-202ENST00000449844 ATP7AQ04656 1500 aa30.67■■■□□ 2.5
NPAS1-202ENST00000449844 IQGAP3Q86VI3 1631 aa30.64■■■□□ 2.5
NPAS1-202ENST00000449844 MAGI2Q86UL8 1455 aa30.62■■■□□ 2.49
NPAS1-202ENST00000449844 CCER2I3L3R5 266 aa30.6■■■□□ 2.49
NPAS1-202ENST00000449844 ANP32CO43423 234 aa30.6■■■□□ 2.49
NPAS1-202ENST00000449844 HSPA5P11021 654 aaKnown RBP30.59■■■□□ 2.49
NPAS1-202ENST00000449844 EIF4G2P78344 907 aaKnown RBP eCLIP30.59■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms