RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 SIN3AQ96ST3 1273 aa25.45■■□□□ 1.67
SMC6-206ENST00000446852 ABCC10Q5T3U5 1492 aa25.44■■□□□ 1.66
SMC6-206ENST00000446852 PLEKHD1A6NEE1 506 aa25.44■■□□□ 1.66
SMC6-206ENST00000446852 CFDP1Q9UEE9 299 aaPredicted RBP25.41■■□□□ 1.66
SMC6-206ENST00000446852 CROCC2H7BZ55 1655 aa25.39■■□□□ 1.66
SMC6-206ENST00000446852 ROCK1Q13464 1354 aa25.39■■□□□ 1.66
SMC6-206ENST00000446852 NEUROD1Q13562 356 aa25.39■■□□□ 1.65
SMC6-206ENST00000446852 ABCC2Q92887 1545 aa25.36■■□□□ 1.65
SMC6-206ENST00000446852 ADGBQ8N7X0 1667 aa25.36■■□□□ 1.65
SMC6-206ENST00000446852 DENND4BO75064 1496 aaPredicted RBP25.33■■□□□ 1.65
SMC6-206ENST00000446852 ZNF777Q9ULD5 760 aaPredicted RBP25.32■■□□□ 1.64
SMC6-206ENST00000446852 TIMELESSQ9UNS1 1208 aa25.29■■□□□ 1.64
SMC6-206ENST00000446852 CDC42BPBQ9Y5S2 1711 aa25.29■■□□□ 1.64
SMC6-206ENST00000446852 PREX2Q70Z35 1606 aa25.28■■□□□ 1.64
SMC6-206ENST00000446852 ADGRL2O95490 1459 aa25.26■■□□□ 1.63
SMC6-206ENST00000446852 TRIM52Q96A61 297 aa25.25■■□□□ 1.63
SMC6-206ENST00000446852 NCOA1Q15788 1441 aa25.25■■□□□ 1.63
SMC6-206ENST00000446852 TTC37Q6PGP7 1564 aa25.25■■□□□ 1.63
SMC6-206ENST00000446852 ZCCHC11Q5TAX3 1644 aaKnown RBP25.24■■□□□ 1.63
SMC6-206ENST00000446852 UHRF1BP1LA0JNW5 1464 aa25.21■■□□□ 1.63
SMC6-206ENST00000446852 SAMD9LQ8IVG5 1584 aa25.21■■□□□ 1.63
SMC6-206ENST00000446852 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.2■■□□□ 1.639e-7■■■□□ 17.5
SMC6-206ENST00000446852 SHANK2Q9UPX8 1470 aa25.2■■□□□ 1.62
SMC6-206ENST00000446852 TONSLQ96HA7 1378 aa25.19■■□□□ 1.62
SMC6-206ENST00000446852 MPHOSPH9Q99550 1183 aa25.19■■□□□ 1.62
SMC6-206ENST00000446852 PPP1R15AO75807 674 aaPredicted RBP25.18■■□□□ 1.62
SMC6-206ENST00000446852 ARHGEF5Q12774 1597 aa25.18■■□□□ 1.62
SMC6-206ENST00000446852 KDM5BQ9UGL1 1544 aa25.17■■□□□ 1.62
SMC6-206ENST00000446852 MYO5CQ9NQX4 1742 aa25.16■■□□□ 1.62
SMC6-206ENST00000446852 C9orf84Q5VXU9 1444 aa25.15■■□□□ 1.62
SMC6-206ENST00000446852 MBD5Q9P267 1494 aa25.15■■□□□ 1.62
SMC6-206ENST00000446852 ANKRD30AQ9BXX3 1397 aa25.15■■□□□ 1.62
SMC6-206ENST00000446852 ACIN1Q9UKV3 1341 aaKnown RBP25.14■■□□□ 1.61
SMC6-206ENST00000446852 MIER1Q8N108 512 aa25.12■■□□□ 1.61
SMC6-206ENST00000446852 ARHGAP5Q13017 1502 aa25.11■■□□□ 1.61
SMC6-206ENST00000446852 HNRNPMP52272 730 aaKnown RBP eCLIP25.1■■□□□ 1.61
SMC6-206ENST00000446852 PZPP20742 1482 aa25.1■■□□□ 1.61
SMC6-206ENST00000446852 FOXD1Q16676 465 aa25.09■■□□□ 1.61
SMC6-206ENST00000446852 CCDC141Q6ZP82 1450 aa25.08■■□□□ 1.61
SMC6-206ENST00000446852 SYCP2Q9BX26 1530 aa25.08■■□□□ 1.6
SMC6-206ENST00000446852 ANKRD50Q9ULJ7 1429 aa25.07■■□□□ 1.6
SMC6-206ENST00000446852 ANKRD30BQ9BXX2 1392 aa25.05■■□□□ 1.6
SMC6-206ENST00000446852 KCNH8Q96L42 1107 aa25.05■■□□□ 1.6
SMC6-206ENST00000446852 TSPY4P0CV99 314 aa25.04■■□□□ 1.6
SMC6-206ENST00000446852 TSPY10P0CW01 314 aa25.04■■□□□ 1.6
SMC6-206ENST00000446852 SLC4A1APQ9BWU0 796 aaKnown RBP25.04■■□□□ 1.6
SMC6-206ENST00000446852 KIF15Q9NS87 1388 aa25■■□□□ 1.59
SMC6-206ENST00000446852 RPRD2Q5VT52 1461 aaKnown RBP24.99■■□□□ 1.59
SMC6-206ENST00000446852 MAST1Q9Y2H9 1570 aa24.99■■□□□ 1.59
SMC6-206ENST00000446852 PLCH2O75038 1416 aa24.98■■□□□ 1.59
SMC6-206ENST00000446852 RSPH4AQ5TD94 716 aa24.96■■□□□ 1.59
SMC6-206ENST00000446852 PLEKHH2Q8IVE3 1493 aa24.96■■□□□ 1.59
SMC6-206ENST00000446852 KIAA1107Q9UPP5 1409 aa24.95■■□□□ 1.59
SMC6-206ENST00000446852 ARHGEF12Q9NZN5 1544 aa24.95■■□□□ 1.58
SMC6-206ENST00000446852 KDM5DQ9BY66 1539 aa24.95■■□□□ 1.58
SMC6-206ENST00000446852 OSCARQ8IYS5 282 aa24.94■■□□□ 1.58
SMC6-206ENST00000446852 TEX14Q8IWB6 1497 aa24.92■■□□□ 1.58
SMC6-206ENST00000446852 WDR7Q9Y4E6 1490 aa24.92■■□□□ 1.58
SMC6-206ENST00000446852 PLXNC1O60486 1568 aa24.91■■□□□ 1.58
SMC6-206ENST00000446852 ABCC1P33527 1531 aa24.91■■□□□ 1.58
SMC6-206ENST00000446852 HIRIP3Q9BW71 556 aaPredicted RBP24.91■■□□□ 1.58
SMC6-206ENST00000446852 L3MBTL2Q969R5 705 aa24.9■■□□□ 1.58
SMC6-206ENST00000446852 NUP155O75694 1391 aa24.89■■□□□ 1.58
SMC6-206ENST00000446852 ARAP3Q8WWN8 1544 aa24.88■■□□□ 1.57
SMC6-206ENST00000446852 PKD2Q13563 968 aa24.88■■□□□ 1.57
SMC6-206ENST00000446852 EFCAB2Q5VUJ9 269 aa24.86■■□□□ 1.57
SMC6-206ENST00000446852 ABCA9Q8IUA7 1624 aa24.85■■□□□ 1.57
SMC6-206ENST00000446852 UNC13BO14795 1591 aa24.83■■□□□ 1.57
SMC6-206ENST00000446852 ASXL2Q76L83 1435 aa24.81■■□□□ 1.56
SMC6-206ENST00000446852 TRAPPC8Q9Y2L5 1435 aa24.81■■□□□ 1.56
SMC6-206ENST00000446852 FAM135AQ9P2D6 1515 aa24.8■■□□□ 1.56
SMC6-206ENST00000446852 YTHDC1Q96MU7 727 aaKnown RBP24.8■■□□□ 1.56
SMC6-206ENST00000446852 DDX10Q13206 875 aaKnown RBP24.79■■□□□ 1.56
SMC6-206ENST00000446852 CENPBP07199 599 aaPredicted RBP24.78■■□□□ 1.56
SMC6-206ENST00000446852 DUOX2Q9NRD8 1548 aa24.78■■□□□ 1.56
SMC6-206ENST00000446852 NBPF8Q3BBV2 869 aa24.75■■□□□ 1.55
SMC6-206ENST00000446852 FANCAO15360 1455 aa24.74■■□□□ 1.55
SMC6-206ENST00000446852 IQGAP3Q86VI3 1631 aa24.73■■□□□ 1.55
SMC6-206ENST00000446852 ZFYVE16Q7Z3T8 1539 aa24.72■■□□□ 1.55
SMC6-206ENST00000446852 ERBINQ96RT1 1412 aa24.71■■□□□ 1.55
SMC6-206ENST00000446852 HSPA5P11021 654 aaKnown RBP24.7■■□□□ 1.54
SMC6-206ENST00000446852 MAGI2Q86UL8 1455 aa24.7■■□□□ 1.54
SMC6-206ENST00000446852 SCAF1Q9H7N4 1312 aaKnown RBP24.68■■□□□ 1.54
SMC6-206ENST00000446852 AFAP1Q8N556 730 aa24.68■■□□□ 1.54
SMC6-206ENST00000446852 INO80Q9ULG1 1556 aaPredicted RBP24.67■■□□□ 1.54
SMC6-206ENST00000446852 RTEL1-TNFRSF6BF6WH68 1400 aa24.66■■□□□ 1.54
SMC6-206ENST00000446852 EIF4G2P78344 907 aaKnown RBP eCLIP24.66■■□□□ 1.541e-6■■■■■ 29.4
SMC6-206ENST00000446852 SPAG9O60271 1321 aaKnown RBP24.66■■□□□ 1.54
SMC6-206ENST00000446852 ADGRL1O94910 1474 aa24.65■■□□□ 1.54
SMC6-206ENST00000446852 NPM1P06748 294 aaKnown RBP eCLIP24.64■■□□□ 1.53
SMC6-206ENST00000446852 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.63■■□□□ 1.535e-7■■□□□ 12.1
SMC6-206ENST00000446852 ATP7AQ04656 1500 aa24.63■■□□□ 1.53
SMC6-206ENST00000446852 SCAPERQ9BY12 1400 aa24.6■■□□□ 1.53
SMC6-206ENST00000446852 PLA2R1Q13018 1463 aa24.6■■□□□ 1.53
SMC6-206ENST00000446852 WASHC2AQ641Q2 1341 aa24.59■■□□□ 1.53
SMC6-206ENST00000446852 SPATA31E1Q6ZUB1 1445 aa24.59■■□□□ 1.53
SMC6-206ENST00000446852 DEPDC5O75140 1603 aa24.58■■□□□ 1.52
SMC6-206ENST00000446852 POLR1AO95602 1720 aaPredicted RBP24.57■■□□□ 1.52
SMC6-206ENST00000446852 UHRF1BP1Q6BDS2 1440 aa24.57■■□□□ 1.52
SMC6-206ENST00000446852 CCDC144AA2RUR9 1427 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms