RNA–Protein interactions for RNA: ENST00000446103.5

PBRM1-215, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-215ENST00000446103 CAMK2BQ13554 666 aa9.83□□□□□ -0.84
PBRM1-215ENST00000446103 IFNL1Q8IU54 200 aa9.83□□□□□ -0.84
PBRM1-215ENST00000446103 POM121Q96HA1 1249 aa9.83□□□□□ -0.84
PBRM1-215ENST00000446103 EMILIN3Q9NT22 766 aa9.82□□□□□ -0.84
PBRM1-215ENST00000446103 DDX27Q96GQ7 796 aaKnown RBP9.82□□□□□ -0.84
PBRM1-215ENST00000446103 ZNF467Q7Z7K2 595 aaPredicted RBP9.81□□□□□ -0.84
PBRM1-215ENST00000446103 SPDYE1Q8NFV5 336 aaPredicted RBP9.81□□□□□ -0.84
PBRM1-215ENST00000446103 CCDC61Q9Y6R9 512 aa9.81□□□□□ -0.84
PBRM1-215ENST00000446103 ARIH1Q9Y4X5 557 aaPredicted RBP9.8□□□□□ -0.84
PBRM1-215ENST00000446103 CCDC9Q9Y3X0 531 aaKnown RBP9.8□□□□□ -0.84
PBRM1-215ENST00000446103 DPYSL4O14531 572 aa9.79□□□□□ -0.84
PBRM1-215ENST00000446103 IGSF3O75054 1194 aa9.79□□□□□ -0.84
PBRM1-215ENST00000446103 CCDC102AQ96A19 550 aa9.79□□□□□ -0.84
PBRM1-215ENST00000446103 REPIN1Q9BWE0 567 aaKnown RBP9.78□□□□□ -0.84
PBRM1-215ENST00000446103 TRAK2O60296 914 aa9.78□□□□□ -0.84
PBRM1-215ENST00000446103 ZNF777Q9ULD5 760 aaPredicted RBP9.78□□□□□ -0.84
PBRM1-215ENST00000446103 KCTD17Q8N5Z5 321 aa9.78□□□□□ -0.84
PBRM1-215ENST00000446103 ZBTB7CA1YPR0 619 aa9.77□□□□□ -0.85
PBRM1-215ENST00000446103 SMYD5Q6GMV2 418 aa9.76□□□□□ -0.85
PBRM1-215ENST00000446103 REM2Q8IYK8 340 aaPredicted RBP9.75□□□□□ -0.85
PBRM1-215ENST00000446103 MS4A1P11836 297 aa9.74□□□□□ -0.85
PBRM1-215ENST00000446103 MCM6Q14566 821 aa9.74□□□□□ -0.85
PBRM1-215ENST00000446103 FOXD4L5Q5VV16 416 aaPredicted RBP9.73□□□□□ -0.85
PBRM1-215ENST00000446103 FOXD4L4Q8WXT5 416 aaPredicted RBP9.73□□□□□ -0.85
PBRM1-215ENST00000446103 NLRP6P59044 892 aa9.73□□□□□ -0.85
PBRM1-215ENST00000446103 MTMR7Q9Y216 660 aa9.72□□□□□ -0.85
PBRM1-215ENST00000446103 PITPNM1O00562 1244 aa9.72□□□□□ -0.85
PBRM1-215ENST00000446103 AEBP1Q8IUX7 1158 aa9.72□□□□□ -0.85
PBRM1-215ENST00000446103 RGS22Q8NE09 1264 aa9.71□□□□□ -0.85
PBRM1-215ENST00000446103 MAP3K13O43283 966 aa9.71□□□□□ -0.86
PBRM1-215ENST00000446103 IRF5Q13568 498 aa9.71□□□□□ -0.86
PBRM1-215ENST00000446103 PDE4AP27815 886 aa9.7□□□□□ -0.86
PBRM1-215ENST00000446103 FBXO31Q5XUX0 539 aaPredicted RBP9.7□□□□□ -0.86
PBRM1-215ENST00000446103 RAD21O60216 631 aa9.69□□□□□ -0.86
PBRM1-215ENST00000446103 PRIM1P49642 420 aaKnown RBP9.69□□□□□ -0.86
PBRM1-215ENST00000446103 FNBP4Q8N3X1 1017 aaPredicted RBP9.69□□□□□ -0.86
PBRM1-215ENST00000446103 RETREG2Q8NC44 543 aa9.68□□□□□ -0.86
PBRM1-215ENST00000446103 ZNF579Q8NAF0 562 aaKnown RBP9.68□□□□□ -0.86
PBRM1-215ENST00000446103 IRF6O14896 467 aa9.67□□□□□ -0.86
PBRM1-215ENST00000446103 AMHR2Q16671 573 aa9.66□□□□□ -0.86
PBRM1-215ENST00000446103 A6NJR5 290 aa9.65□□□□□ -0.86
PBRM1-215ENST00000446103 FLIIQ13045 1269 aa9.65□□□□□ -0.86
PBRM1-215ENST00000446103 PDIA6Q15084 440 aa9.65□□□□□ -0.86
PBRM1-215ENST00000446103 PPP1R15BQ5SWA1 713 aa9.65□□□□□ -0.87
PBRM1-215ENST00000446103 DDRGK1Q96HY6 314 aa9.65□□□□□ -0.87
PBRM1-215ENST00000446103 TRPC6Q9Y210 931 aa9.65□□□□□ -0.87
PBRM1-215ENST00000446103 OXER1Q8TDS5 423 aa9.64□□□□□ -0.87
PBRM1-215ENST00000446103 SOX12O15370 315 aa9.64□□□□□ -0.87
PBRM1-215ENST00000446103 DSG2Q14126 1118 aa9.64□□□□□ -0.87
PBRM1-215ENST00000446103 NISCHQ9Y2I1 1504 aa9.62□□□□□ -0.87
PBRM1-215ENST00000446103 MAP2K5Q13163 448 aa9.62□□□□□ -0.87
PBRM1-215ENST00000446103 CARNS1A5YM72 827 aa9.62□□□□□ -0.87
PBRM1-215ENST00000446103 GRXCR2A6NFK2 248 aa9.62□□□□□ -0.87
PBRM1-215ENST00000446103 GIGYF2Q6Y7W6 1299 aaKnown RBP9.62□□□□□ -0.87
PBRM1-215ENST00000446103 AKT1S1Q96B36 256 aa9.62□□□□□ -0.87
PBRM1-215ENST00000446103 PHOX2BQ99453 314 aa9.61□□□□□ -0.87
PBRM1-215ENST00000446103 TTLL12Q14166 644 aaPredicted RBP9.61□□□□□ -0.87
PBRM1-215ENST00000446103 PROCA1Q8NCQ7 364 aaPredicted RBP9.6□□□□□ -0.87
PBRM1-215ENST00000446103 FARP1Q9Y4F1 1045 aaPredicted RBP9.6□□□□□ -0.87
PBRM1-215ENST00000446103 PROSER2Q86WR7 435 aaPredicted RBP9.6□□□□□ -0.87
PBRM1-215ENST00000446103 NUTM2FA1L443 756 aa9.59□□□□□ -0.87
PBRM1-215ENST00000446103 TRAIPQ9BWF2 469 aa9.59□□□□□ -0.87
PBRM1-215ENST00000446103 MINK1Q8N4C8 1332 aaPredicted RBP9.59□□□□□ -0.87
PBRM1-215ENST00000446103 NLRP7Q8WX94 980 aa9.58□□□□□ -0.88
PBRM1-215ENST00000446103 KIF12Q96FN5 646 aa9.58□□□□□ -0.88
PBRM1-215ENST00000446103 GZF1Q9H116 711 aaPredicted RBP9.57□□□□□ -0.88
PBRM1-215ENST00000446103 OSBPP22059 807 aa9.57□□□□□ -0.88
PBRM1-215ENST00000446103 GPHNQ9NQX3 736 aaPredicted RBP9.56□□□□□ -0.88
PBRM1-215ENST00000446103 PLSCR2Q9NRY7 297 aa9.55□□□□□ -0.88
PBRM1-215ENST00000446103 RBM25P49756 843 aaKnown RBP9.55□□□□□ -0.88
PBRM1-215ENST00000446103 MFAP1P55081 439 aaKnown RBP9.55□□□□□ -0.88
PBRM1-215ENST00000446103 DPY19L2Q6NUT2 758 aa9.55□□□□□ -0.88
PBRM1-215ENST00000446103 GOPCQ9HD26 462 aa9.53□□□□□ -0.88
PBRM1-215ENST00000446103 GNPATO15228 680 aa9.53□□□□□ -0.88
PBRM1-215ENST00000446103 SNRKQ9NRH2 765 aa9.53□□□□□ -0.88
PBRM1-215ENST00000446103 DDX12PQ92771 950 aa9.52□□□□□ -0.89
PBRM1-215ENST00000446103 COG6Q9Y2V7 657 aa9.52□□□□□ -0.89
PBRM1-215ENST00000446103 FAM161AQ3B820 660 aa9.5□□□□□ -0.89
PBRM1-215ENST00000446103 POLR3EQ9NVU0 708 aa9.5□□□□□ -0.89
PBRM1-215ENST00000446103 TMCO4Q5TGY1 634 aa9.48□□□□□ -0.89
PBRM1-215ENST00000446103 POM121CA8CG34 1229 aa9.47□□□□□ -0.89
PBRM1-215ENST00000446103 CDHR5Q9HBB8 845 aa9.47□□□□□ -0.89
PBRM1-215ENST00000446103 PCMTD1Q96MG8 357 aaPredicted RBP9.46□□□□□ -0.89
PBRM1-215ENST00000446103 PTGDRQ13258 359 aa9.46□□□□□ -0.9
PBRM1-215ENST00000446103 PHF12Q96QT6 1004 aa9.46□□□□□ -0.9
PBRM1-215ENST00000446103 TMUB1Q9BVT8 246 aa9.45□□□□□ -0.9
PBRM1-215ENST00000446103 SH3D19Q5HYK7 790 aa9.44□□□□□ -0.9
PBRM1-215ENST00000446103 UPF1Q92900 1129 aaKnown RBP eCLIP9.44□□□□□ -0.9
PBRM1-215ENST00000446103 CCDC97Q96F63 343 aaPredicted RBP9.44□□□□□ -0.9
PBRM1-215ENST00000446103 MDM2Q00987 491 aaPredicted RBP9.43□□□□□ -0.9
PBRM1-215ENST00000446103 HIC1Q14526 733 aa9.43□□□□□ -0.9
PBRM1-215ENST00000446103 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.43□□□□□ -0.9
PBRM1-215ENST00000446103 SERPINA10Q9UK55 444 aa9.42□□□□□ -0.9
PBRM1-215ENST00000446103 TMEM106CQ9BVX2 250 aa9.42□□□□□ -0.9
PBRM1-215ENST00000446103 GDPD2Q9HCC8 539 aa9.41□□□□□ -0.9
PBRM1-215ENST00000446103 SPDYE16A6NNV3 312 aaPredicted RBP9.41□□□□□ -0.9
PBRM1-215ENST00000446103 NPDC1Q9NQX5 325 aaPredicted RBP9.41□□□□□ -0.9
PBRM1-215ENST00000446103 FOXK1P85037 733 aa9.4□□□□□ -0.9
PBRM1-215ENST00000446103 ILDR1Q86SU0 546 aaPredicted RBP9.4□□□□□ -0.9
PBRM1-215ENST00000446103 PRKAR2AP13861 404 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms