RNA–Protein interactions for RNA: ENST00000445569.6

CALD1-211, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 525 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-211ENST00000445569 ABCC10Q5T3U5 1492 aa15.42■□□□□ 0.06
CALD1-211ENST00000445569 PREX2Q70Z35 1606 aa15.42■□□□□ 0.06
CALD1-211ENST00000445569 CAMSAP2Q08AD1 1489 aa15.41■□□□□ 0.06
CALD1-211ENST00000445569 PLEKHD1A6NEE1 506 aa15.41■□□□□ 0.06
CALD1-211ENST00000445569 ACIN1Q9UKV3 1341 aaKnown RBP15.41■□□□□ 0.06
CALD1-211ENST00000445569 ZCCHC11Q5TAX3 1644 aaKnown RBP15.4■□□□□ 0.06
CALD1-211ENST00000445569 GPATCH8Q9UKJ3 1502 aaKnown RBP15.39■□□□□ 0.05
CALD1-211ENST00000445569 DAPK1P53355 1430 aa15.39■□□□□ 0.05
CALD1-211ENST00000445569 ROCK1Q13464 1354 aa15.38■□□□□ 0.05
CALD1-211ENST00000445569 KDM5BQ9UGL1 1544 aa15.38■□□□□ 0.05
CALD1-211ENST00000445569 NAIPQ13075 1403 aa15.37■□□□□ 0.05
CALD1-211ENST00000445569 PTPRKQ15262 1439 aa15.37■□□□□ 0.05
CALD1-211ENST00000445569 FAM69CQ0P6D2 419 aa15.37■□□□□ 0.05
CALD1-211ENST00000445569 SHANK2Q9UPX8 1470 aa15.37■□□□□ 0.05
CALD1-211ENST00000445569 MYO5CQ9NQX4 1742 aa15.37■□□□□ 0.05
CALD1-211ENST00000445569 MAPKBP1O60336 1514 aa15.36■□□□□ 0.05
CALD1-211ENST00000445569 ARHGEF5Q12774 1597 aa15.34■□□□□ 0.05
CALD1-211ENST00000445569 ADGRL2O95490 1459 aa15.33■□□□□ 0.05
CALD1-211ENST00000445569 CFDP1Q9UEE9 299 aaPredicted RBP15.33■□□□□ 0.04
CALD1-211ENST00000445569 TTC37Q6PGP7 1564 aa15.32■□□□□ 0.04
CALD1-211ENST00000445569 ABCC5O15440 1437 aa15.32■□□□□ 0.04
CALD1-211ENST00000445569 CDC42BPBQ9Y5S2 1711 aa15.31■□□□□ 0.04
CALD1-211ENST00000445569 PLEKHH2Q8IVE3 1493 aa15.3■□□□□ 0.04
CALD1-211ENST00000445569 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.29■□□□□ 0.04
CALD1-211ENST00000445569 ARAP3Q8WWN8 1544 aa15.29■□□□□ 0.04
CALD1-211ENST00000445569 SAMD9LQ8IVG5 1584 aa15.28■□□□□ 0.04
CALD1-211ENST00000445569 ARHGAP5Q13017 1502 aa15.27■□□□□ 0.03
CALD1-211ENST00000445569 CCDC141Q6ZP82 1450 aa15.27■□□□□ 0.03
CALD1-211ENST00000445569 MAST1Q9Y2H9 1570 aa15.25■□□□□ 0.03
CALD1-211ENST00000445569 ANKRD30AQ9BXX3 1397 aa15.24■□□□□ 0.03
CALD1-211ENST00000445569 WDR7Q9Y4E6 1490 aa15.24■□□□□ 0.03
CALD1-211ENST00000445569 ASXL2Q76L83 1435 aa15.24■□□□□ 0.03
CALD1-211ENST00000445569 TIMELESSQ9UNS1 1208 aa15.22■□□□□ 0.03
CALD1-211ENST00000445569 C9orf84Q5VXU9 1444 aa15.22■□□□□ 0.03
CALD1-211ENST00000445569 KDM6BO15054 1643 aa15.21■□□□□ 0.03
CALD1-211ENST00000445569 PLXNC1O60486 1568 aa15.21■□□□□ 0.03
CALD1-211ENST00000445569 DIP2BQ9P265 1576 aa15.21■□□□□ 0.03
CALD1-211ENST00000445569 KIAA1107Q9UPP5 1409 aa15.21■□□□□ 0.03
CALD1-211ENST00000445569 SYCP2Q9BX26 1530 aa15.21■□□□□ 0.03
CALD1-211ENST00000445569 ABCA9Q8IUA7 1624 aa15.21■□□□□ 0.02
CALD1-211ENST00000445569 ZNF644Q9H582 1327 aaPredicted RBP15.2■□□□□ 0.02
CALD1-211ENST00000445569 NCOA1Q15788 1441 aa15.2■□□□□ 0.02
CALD1-211ENST00000445569 ABCC1P33527 1531 aa15.19■□□□□ 0.02
CALD1-211ENST00000445569 RSPH4AQ5TD94 716 aa15.19■□□□□ 0.02
CALD1-211ENST00000445569 RRP7BPQ9NSQ0 103 aa15.19■□□□□ 0.02
CALD1-211ENST00000445569 CHIC2Q9UKJ5 165 aa15.19■□□□□ 0.02
CALD1-211ENST00000445569 ZNF777Q9ULD5 760 aaPredicted RBP15.19■□□□□ 0.02
CALD1-211ENST00000445569 PLCH2O75038 1416 aa15.18■□□□□ 0.02
CALD1-211ENST00000445569 MBD5Q9P267 1494 aa15.18■□□□□ 0.02
CALD1-211ENST00000445569 CFAP74Q9C0B2 1584 aa15.16■□□□□ 0.02
CALD1-211ENST00000445569 KDM5DQ9BY66 1539 aa15.16■□□□□ 0.02
CALD1-211ENST00000445569 TSPY4P0CV99 314 aa15.14■□□□□ 0.01
CALD1-211ENST00000445569 TSPY10P0CW01 314 aa15.14■□□□□ 0.01
CALD1-211ENST00000445569 SENP3Q9H4L4 574 aaPredicted RBP15.14■□□□□ 0.01
CALD1-211ENST00000445569 KIF13AQ9H1H9 1805 aa15.14■□□□□ 0.01
CALD1-211ENST00000445569 ANKRD50Q9ULJ7 1429 aa15.14■□□□□ 0.01
CALD1-211ENST00000445569 ZNF316A6NFI3 1004 aaPredicted RBP15.13■□□□□ 0.01
CALD1-211ENST00000445569 KIF15Q9NS87 1388 aa15.11■□□□□ 0.01
CALD1-211ENST00000445569 GLI2P10070 1586 aa15.11■□□□□ 0.01
CALD1-211ENST00000445569 TRIM52Q96A61 297 aa15.11■□□□□ 0.01
CALD1-211ENST00000445569 TONSLQ96HA7 1378 aa15.11■□□□□ 0.01
CALD1-211ENST00000445569 EFCAB2Q5VUJ9 269 aa15.1■□□□□ 0.01
CALD1-211ENST00000445569 UNC13BO14795 1591 aa15.1■□□□□ 0.01
CALD1-211ENST00000445569 KCNH8Q96L42 1107 aa15.09■□□□□ 0.01
CALD1-211ENST00000445569 DENND4BO75064 1496 aaPredicted RBP15.08■□□□□ 0.01
CALD1-211ENST00000445569 DUOX2Q9NRD8 1548 aa15.08■□□□□ 0.01
CALD1-211ENST00000445569 PZPP20742 1482 aa15.08■□□□□ 0
CALD1-211ENST00000445569 FANCAO15360 1455 aa15.07■□□□□ 0
CALD1-211ENST00000445569 ERBINQ96RT1 1412 aa15.06■□□□□ 0
CALD1-211ENST00000445569 HNRNPMP52272 730 aaKnown RBP eCLIP15.05■□□□□ -0
CALD1-211ENST00000445569 MPHOSPH9Q99550 1183 aa15.05■□□□□ -0
CALD1-211ENST00000445569 ZFYVE16Q7Z3T8 1539 aa15.05■□□□□ -0
CALD1-211ENST00000445569 INO80Q9ULG1 1556 aaPredicted RBP15.05■□□□□ -0
CALD1-211ENST00000445569 ARHGEF12Q9NZN5 1544 aa15.04■□□□□ -0
CALD1-211ENST00000445569 RTEL1-TNFRSF6BF6WH68 1400 aa15.04■□□□□ -0
CALD1-211ENST00000445569 RPRD2Q5VT52 1461 aaKnown RBP15.03■□□□□ -0
CALD1-211ENST00000445569 IQGAP3Q86VI3 1631 aa15.03■□□□□ -0
CALD1-211ENST00000445569 CD109Q6YHK3 1445 aa15.02■□□□□ -0
CALD1-211ENST00000445569 NEUROD1Q13562 356 aa15.02■□□□□ -0
CALD1-211ENST00000445569 SIN3AQ96ST3 1273 aa15.02■□□□□ -0
CALD1-211ENST00000445569 ADGRL1O94910 1474 aa15.01□□□□□ -0.01
CALD1-211ENST00000445569 MAGI2Q86UL8 1455 aa15.01□□□□□ -0.01
CALD1-211ENST00000445569 TEX14Q8IWB6 1497 aa15.01□□□□□ -0.01
CALD1-211ENST00000445569 COL17A1Q9UMD9 1497 aaPredicted RBP15.01□□□□□ -0.01
CALD1-211ENST00000445569 SLC4A1APQ9BWU0 796 aaKnown RBP15.01□□□□□ -0.01
CALD1-211ENST00000445569 EIF2AK4Q9P2K8 1649 aaKnown RBP15.01□□□□□ -0.01
CALD1-211ENST00000445569 ATP7AQ04656 1500 aa15.01□□□□□ -0.01
CALD1-211ENST00000445569 DIEXFQ68CQ4 756 aaKnown RBP15□□□□□ -0.01
CALD1-211ENST00000445569 ANKRD30BQ9BXX2 1392 aa14.99□□□□□ -0.01
CALD1-211ENST00000445569 FAM135AQ9P2D6 1515 aa14.99□□□□□ -0.01
CALD1-211ENST00000445569 ZNF518AQ6AHZ1 1483 aa14.97□□□□□ -0.01
CALD1-211ENST00000445569 MAP3K4Q9Y6R4 1608 aa14.97□□□□□ -0.01
CALD1-211ENST00000445569 TRAPPC8Q9Y2L5 1435 aa14.97□□□□□ -0.01
CALD1-211ENST00000445569 NUP155O75694 1391 aa14.97□□□□□ -0.01
CALD1-211ENST00000445569 NEO1Q92859 1461 aa14.96□□□□□ -0.01
CALD1-211ENST00000445569 DEPDC5O75140 1603 aa14.96□□□□□ -0.01
CALD1-211ENST00000445569 KDM4FA0A1W2PPD8 638 aa14.96□□□□□ -0.01
CALD1-211ENST00000445569 PPP1R15AO75807 674 aaPredicted RBP14.95□□□□□ -0.02
CALD1-211ENST00000445569 PHF23Q9BUL5 403 aaPredicted RBP14.95□□□□□ -0.02
CALD1-211ENST00000445569 SPAG9O60271 1321 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms