RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 KIF3BO15066 747 aa14.4□□□□□ -0.1
CALD1-210ENST00000443197 IQGAP2Q13576 1575 aa14.4□□□□□ -0.1
CALD1-210ENST00000443197 OSCARQ8IYS5 282 aa14.39□□□□□ -0.11
CALD1-210ENST00000443197 PLB1Q6P1J6 1458 aa14.39□□□□□ -0.11
CALD1-210ENST00000443197 CYB5RLQ6IPT4 315 aa14.39□□□□□ -0.11
CALD1-210ENST00000443197 EPRSP07814 1512 aaKnown RBP14.39□□□□□ -0.11
CALD1-210ENST00000443197 SPAG9O60271 1321 aaKnown RBP14.38□□□□□ -0.11
CALD1-210ENST00000443197 GRIN2AQ12879 1464 aa14.37□□□□□ -0.11
CALD1-210ENST00000443197 MLECQ14165 292 aa14.37□□□□□ -0.11
CALD1-210ENST00000443197 KIF21AQ7Z4S6 1674 aa14.37□□□□□ -0.11
CALD1-210ENST00000443197 UACAQ9BZF9 1416 aa14.36□□□□□ -0.11
CALD1-210ENST00000443197 RSPH4AQ5TD94 716 aa14.34□□□□□ -0.11
CALD1-210ENST00000443197 AFAP1Q8N556 730 aa14.34□□□□□ -0.11
CALD1-210ENST00000443197 SYNJ2O15056 1496 aa14.33□□□□□ -0.12
CALD1-210ENST00000443197 CC2D1BQ5T0F9 858 aaKnown RBP14.33□□□□□ -0.12
CALD1-210ENST00000443197 ARID4BQ4LE39 1312 aaPredicted RBP14.32□□□□□ -0.12
CALD1-210ENST00000443197 EHBP1L1Q8N3D4 1523 aa14.32□□□□□ -0.12
CALD1-210ENST00000443197 TROQ12816 1431 aaPredicted RBP14.31□□□□□ -0.12
CALD1-210ENST00000443197 KIF15Q9NS87 1388 aa14.31□□□□□ -0.12
CALD1-210ENST00000443197 SUPT16HQ9Y5B9 1047 aaKnown RBP14.3□□□□□ -0.12
CALD1-210ENST00000443197 HFM1A2PYH4 1435 aa14.3□□□□□ -0.12
CALD1-210ENST00000443197 NAIPQ13075 1403 aa14.3□□□□□ -0.12
CALD1-210ENST00000443197 HECW1Q76N89 1606 aa14.3□□□□□ -0.12
CALD1-210ENST00000443197 ANKRD50Q9ULJ7 1429 aa14.29□□□□□ -0.12
CALD1-210ENST00000443197 NUTM2DQ5VT03 806 aaPredicted RBP14.29□□□□□ -0.12
CALD1-210ENST00000443197 ROCK2O75116 1388 aaKnown RBP14.28□□□□□ -0.12
CALD1-210ENST00000443197 KANK1Q14678 1352 aa14.28□□□□□ -0.12
CALD1-210ENST00000443197 ST20-MTHFSA0A0A6YYL1 179 aa14.28□□□□□ -0.12
CALD1-210ENST00000443197 SAFB2Q14151 953 aaKnown RBP eCLIP14.27□□□□□ -0.12
CALD1-210ENST00000443197 MAGI1Q96QZ7 1491 aaPredicted RBP14.27□□□□□ -0.12
CALD1-210ENST00000443197 MAP3K1Q13233 1512 aa14.27□□□□□ -0.13
CALD1-210ENST00000443197 SUPT6HQ7KZ85 1726 aaKnown RBP14.26□□□□□ -0.13
CALD1-210ENST00000443197 KNSTRNQ9Y448 316 aa14.26□□□□□ -0.13
CALD1-210ENST00000443197 MIA2Q96PC5 1412 aa14.26□□□□□ -0.13
CALD1-210ENST00000443197 WDR43Q15061 677 aaKnown RBP eCLIP14.25□□□□□ -0.13
CALD1-210ENST00000443197 PTPRKQ15262 1439 aa14.25□□□□□ -0.13
CALD1-210ENST00000443197 TNNT2P45379 298 aaPredicted RBP14.25□□□□□ -0.13
CALD1-210ENST00000443197 CCER2I3L3R5 266 aa14.24□□□□□ -0.13
CALD1-210ENST00000443197 DAPK1P53355 1430 aa14.24□□□□□ -0.13
CALD1-210ENST00000443197 ARHGEF11O15085 1522 aa14.23□□□□□ -0.13
CALD1-210ENST00000443197 TMF1P82094 1093 aa14.23□□□□□ -0.13
CALD1-210ENST00000443197 NBPF8Q3BBV2 869 aa14.23□□□□□ -0.13
CALD1-210ENST00000443197 THOC2Q8NI27 1593 aaKnown RBP14.23□□□□□ -0.13
CALD1-210ENST00000443197 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.22□□□□□ -0.13
CALD1-210ENST00000443197 CCDC144AA2RUR9 1427 aa14.22□□□□□ -0.13
CALD1-210ENST00000443197 WASHC2CQ9Y4E1 1318 aa14.21□□□□□ -0.13
CALD1-210ENST00000443197 TRHP20396 242 aaPredicted RBP14.21□□□□□ -0.14
CALD1-210ENST00000443197 CANXP27824 592 aaKnown RBP14.21□□□□□ -0.14
CALD1-210ENST00000443197 STK26Q9P289 416 aa14.21□□□□□ -0.14
CALD1-210ENST00000443197 ARHGAP5Q13017 1502 aa14.21□□□□□ -0.14
CALD1-210ENST00000443197 WDR97A6NE52 1622 aa14.2□□□□□ -0.14
CALD1-210ENST00000443197 BCL11AQ9H165 835 aa14.2□□□□□ -0.14
CALD1-210ENST00000443197 C9orf84Q5VXU9 1444 aa14.19□□□□□ -0.14
CALD1-210ENST00000443197 PTPN23Q9H3S7 1636 aa14.19□□□□□ -0.14
CALD1-210ENST00000443197 ABCC5O15440 1437 aa14.18□□□□□ -0.14
CALD1-210ENST00000443197 CTTNBP2Q8WZ74 1663 aa14.18□□□□□ -0.14
CALD1-210ENST00000443197 CDCA8Q53HL2 280 aa14.18□□□□□ -0.14
CALD1-210ENST00000443197 WASHC2AQ641Q2 1341 aa14.17□□□□□ -0.14
CALD1-210ENST00000443197 USP47Q96K76 1375 aa14.17□□□□□ -0.14
CALD1-210ENST00000443197 ADAMTS12P58397 1594 aa14.17□□□□□ -0.14
CALD1-210ENST00000443197 NUP153P49790 1475 aaKnown RBP14.16□□□□□ -0.14
CALD1-210ENST00000443197 SLC24A1O60721 1099 aa14.16□□□□□ -0.14
CALD1-210ENST00000443197 PLEKHG5O94827 1062 aa14.16□□□□□ -0.14
CALD1-210ENST00000443197 POGKQ9P215 609 aa14.16□□□□□ -0.14
CALD1-210ENST00000443197 ABCA5Q8WWZ7 1642 aa14.16□□□□□ -0.14
CALD1-210ENST00000443197 NEUROD2Q15784 382 aa14.15□□□□□ -0.14
CALD1-210ENST00000443197 EIF4G3O43432 1585 aaKnown RBP14.15□□□□□ -0.14
CALD1-210ENST00000443197 CCDC136Q96JN2 1154 aa14.15□□□□□ -0.14
CALD1-210ENST00000443197 NEFMP07197 916 aa14.14□□□□□ -0.15
CALD1-210ENST00000443197 PRKRIP1Q9H875 184 aaPredicted RBP14.14□□□□□ -0.15
CALD1-210ENST00000443197 PPM1GO15355 546 aaPredicted RBP14.14□□□□□ -0.15
CALD1-210ENST00000443197 KIF7Q2M1P5 1343 aa14.13□□□□□ -0.15
CALD1-210ENST00000443197 FAM69CQ0P6D2 419 aa14.13□□□□□ -0.15
CALD1-210ENST00000443197 CAMSAP2Q08AD1 1489 aa14.13□□□□□ -0.15
CALD1-210ENST00000443197 NBPF1Q3BBV0 1214 aa14.12□□□□□ -0.15
CALD1-210ENST00000443197 TRAK1Q9UPV9 953 aa14.12□□□□□ -0.15
CALD1-210ENST00000443197 WDR62O43379 1518 aa14.12□□□□□ -0.15
CALD1-210ENST00000443197 TARBP1Q13395 1621 aaKnown RBP14.12□□□□□ -0.15
CALD1-210ENST00000443197 ATP10BO94823 1461 aa14.11□□□□□ -0.15
CALD1-210ENST00000443197 SCAPERQ9BY12 1400 aa14.1□□□□□ -0.15
CALD1-210ENST00000443197 RAPGEF3O95398 923 aa14.1□□□□□ -0.15
CALD1-210ENST00000443197 DAXXQ9UER7 740 aaPredicted RBP14.1□□□□□ -0.15
CALD1-210ENST00000443197 SRPK2P78362 688 aaKnown RBP14.1□□□□□ -0.15
CALD1-210ENST00000443197 NCOA1Q15788 1441 aa14.1□□□□□ -0.15
CALD1-210ENST00000443197 DISP1Q96F81 1524 aa14.09□□□□□ -0.15
CALD1-210ENST00000443197 GPATCH8Q9UKJ3 1502 aaKnown RBP14.09□□□□□ -0.15
CALD1-210ENST00000443197 UGGT2Q9NYU1 1516 aa14.09□□□□□ -0.15
CALD1-210ENST00000443197 KIAA1107Q9UPP5 1409 aa14.08□□□□□ -0.16
CALD1-210ENST00000443197 CCDC7Q96M83 1385 aa14.08□□□□□ -0.16
CALD1-210ENST00000443197 PANK3Q9H999 370 aa14.08□□□□□ -0.16
CALD1-210ENST00000443197 MAPKBP1O60336 1514 aa14.08□□□□□ -0.16
CALD1-210ENST00000443197 ROCK1Q13464 1354 aa14.08□□□□□ -0.16
CALD1-210ENST00000443197 C11orf95C9JLR9 678 aaPredicted RBP14.07□□□□□ -0.16
CALD1-210ENST00000443197 RAPGEF6Q8TEU7 1601 aa14.07□□□□□ -0.16
CALD1-210ENST00000443197 PBRM1Q86U86 1689 aa14.07□□□□□ -0.16
CALD1-210ENST00000443197 KIAA0556O60303 1618 aa14.07□□□□□ -0.16
CALD1-210ENST00000443197 ANKRD30BQ9BXX2 1392 aa14.06□□□□□ -0.16
CALD1-210ENST00000443197 B4GALNT3Q6L9W6 998 aa14.06□□□□□ -0.16
CALD1-210ENST00000443197 NPM2Q86SE8 214 aaKnown RBP14.06□□□□□ -0.16
CALD1-210ENST00000443197 KTN1Q86UP2 1357 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms