RNA–Protein interactions for RNA: ENST00000436792.6

VPS8-207, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene VPS8, Length 5,011 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-207ENST00000436792 AMPHP49418 695 aa11.81□□□□□ -0.52
VPS8-207ENST00000436792 SAFB2Q14151 953 aaKnown RBP eCLIP11.8□□□□□ -0.52
VPS8-207ENST00000436792 CLSTN1O94985 981 aa11.8□□□□□ -0.52
VPS8-207ENST00000436792 FGD1P98174 961 aa11.8□□□□□ -0.52
VPS8-207ENST00000436792 DIEXFQ68CQ4 756 aaKnown RBP11.8□□□□□ -0.52
VPS8-207ENST00000436792 PPP1R1BQ9UD71 204 aaPredicted RBP11.8□□□□□ -0.52
VPS8-207ENST00000436792 ANKRD30AQ9BXX3 1397 aa11.8□□□□□ -0.52
VPS8-207ENST00000436792 PSME1Q06323 249 aa11.79□□□□□ -0.52
VPS8-207ENST00000436792 EIF3AQ14152 1382 aaKnown RBP11.79□□□□□ -0.52
VPS8-207ENST00000436792 VGFO15240 615 aaPredicted RBP11.79□□□□□ -0.52
VPS8-207ENST00000436792 CTDP1Q9Y5B0 961 aaPredicted RBP11.79□□□□□ -0.52
VPS8-207ENST00000436792 FMN1Q68DA7 1419 aa11.78□□□□□ -0.52
VPS8-207ENST00000436792 FRAT2O75474 233 aaPredicted RBP11.78□□□□□ -0.52
VPS8-207ENST00000436792 THEMISQ8N1K5 641 aaPredicted RBP11.78□□□□□ -0.52
VPS8-207ENST00000436792 ANP32EQ9BTT0 268 aa11.78□□□□□ -0.52
VPS8-207ENST00000436792 WDHD1O75717 1129 aaPredicted RBP11.78□□□□□ -0.52
VPS8-207ENST00000436792 PROSER2Q86WR7 435 aaPredicted RBP11.77□□□□□ -0.53
VPS8-207ENST00000436792 FTSJ3Q8IY81 847 aaKnown RBP11.77□□□□□ -0.53
VPS8-207ENST00000436792 TRIM34Q9BYJ4 488 aa11.76□□□□□ -0.53
VPS8-207ENST00000436792 NCLP19338 710 aaKnown RBP11.76□□□□□ -0.53
VPS8-207ENST00000436792 MORC1Q86VD1 984 aa11.76□□□□□ -0.53
VPS8-207ENST00000436792 GORABQ5T7V8 394 aa11.75□□□□□ -0.53
VPS8-207ENST00000436792 NOL10Q9BSC4 688 aaKnown RBP11.74□□□□□ -0.53
VPS8-207ENST00000436792 SALL2Q9Y467 1007 aaPredicted RBP11.74□□□□□ -0.53
VPS8-207ENST00000436792 KCNJ4P48050 445 aa11.74□□□□□ -0.53
VPS8-207ENST00000436792 UACAQ9BZF9 1416 aa11.74□□□□□ -0.53
VPS8-207ENST00000436792 PIP4K2BP78356 416 aa11.74□□□□□ -0.53
VPS8-207ENST00000436792 C1orf141Q5JVX7 400 aa11.74□□□□□ -0.53
VPS8-207ENST00000436792 FAM9BQ8IZU0 186 aa11.73□□□□□ -0.53
VPS8-207ENST00000436792 DCAF1Q9Y4B6 1507 aa11.73□□□□□ -0.53
VPS8-207ENST00000436792 FKBP8Q14318 412 aa11.72□□□□□ -0.53
VPS8-207ENST00000436792 HSP90B1P14625 803 aaKnown RBP11.72□□□□□ -0.53
VPS8-207ENST00000436792 ANKLE2Q86XL3 938 aa11.72□□□□□ -0.53
VPS8-207ENST00000436792 MRS2Q9HD23 443 aa11.71□□□□□ -0.53
VPS8-207ENST00000436792 DCAF11Q8TEB1 546 aa11.71□□□□□ -0.53
VPS8-207ENST00000436792 DDRGK1Q96HY6 314 aa11.71□□□□□ -0.53
VPS8-207ENST00000436792 STK31Q9BXU1 1019 aa11.71□□□□□ -0.54
VPS8-207ENST00000436792 TTC5Q8N0Z6 440 aa11.7□□□□□ -0.54
VPS8-207ENST00000436792 SYTL4Q96C24 671 aaPredicted RBP11.7□□□□□ -0.54
VPS8-207ENST00000436792 AMOTL1Q8IY63 956 aa11.7□□□□□ -0.54
VPS8-207ENST00000436792 FANCD2Q9BXW9 1451 aa11.69□□□□□ -0.54
VPS8-207ENST00000436792 LMOD3Q0VAK6 560 aa11.69□□□□□ -0.54
VPS8-207ENST00000436792 CCDC18Q5T9S5 1454 aa11.69□□□□□ -0.54
VPS8-207ENST00000436792 ANP32AP39687 249 aaKnown RBP11.68□□□□□ -0.54
VPS8-207ENST00000436792 TNNT2P45379 298 aaPredicted RBP11.68□□□□□ -0.54
VPS8-207ENST00000436792 CFAP44Q96MT7 982 aa11.68□□□□□ -0.54
VPS8-207ENST00000436792 GPRASP1Q5JY77 1395 aa11.68□□□□□ -0.54
VPS8-207ENST00000436792 CCAR1Q8IX12 1150 aaKnown RBP11.68□□□□□ -0.54
VPS8-207ENST00000436792 TOM1O60784 492 aa11.67□□□□□ -0.54
VPS8-207ENST00000436792 NUTM2BA6NNL0 878 aaPredicted RBP11.67□□□□□ -0.54
VPS8-207ENST00000436792 NUTM2EB1AL46 878 aaPredicted RBP11.67□□□□□ -0.54
VPS8-207ENST00000436792 PDE3BQ13370 1112 aa11.67□□□□□ -0.54
VPS8-207ENST00000436792 NUTM2AQ8IVF1 878 aaPredicted RBP11.67□□□□□ -0.54
VPS8-207ENST00000436792 NCBP3Q53F19 620 aaKnown RBP11.66□□□□□ -0.54
VPS8-207ENST00000436792 RAPGEF4Q8WZA2 1011 aa11.65□□□□□ -0.54
VPS8-207ENST00000436792 RBM33Q96EV2 1170 aaKnown RBP11.65□□□□□ -0.54
VPS8-207ENST00000436792 NUP155O75694 1391 aa11.65□□□□□ -0.54
VPS8-207ENST00000436792 HNRNPUQ00839 825 aaKnown RBP eCLIP11.65□□□□□ -0.55
VPS8-207ENST00000436792 NEUROD2Q15784 382 aa11.65□□□□□ -0.55
VPS8-207ENST00000436792 NUTM2DQ5VT03 806 aaPredicted RBP11.65□□□□□ -0.55
VPS8-207ENST00000436792 CHMP3Q9Y3E7 222 aa11.65□□□□□ -0.55
VPS8-207ENST00000436792 WWC1Q8IX03 1113 aa11.64□□□□□ -0.55
VPS8-207ENST00000436792 SMC4Q9NTJ3 1288 aa11.64□□□□□ -0.55
VPS8-207ENST00000436792 CNKSR2Q8WXI2 1034 aa11.64□□□□□ -0.55
VPS8-207ENST00000436792 LTV1Q96GA3 475 aaPredicted RBP11.64□□□□□ -0.55
VPS8-207ENST00000436792 NAP1L2Q9ULW6 460 aaPredicted RBP11.63□□□□□ -0.55
VPS8-207ENST00000436792 HNRNPMP52272 730 aaKnown RBP eCLIP11.63□□□□□ -0.55
VPS8-207ENST00000436792 TEFQ10587 303 aa11.62□□□□□ -0.55
VPS8-207ENST00000436792 PKD2Q13563 968 aa11.62□□□□□ -0.55
VPS8-207ENST00000436792 COG3Q96JB2 828 aa11.62□□□□□ -0.55
VPS8-207ENST00000436792 GPATCH3Q96I76 525 aa11.62□□□□□ -0.55
VPS8-207ENST00000436792 NUTM2FA1L443 756 aa11.62□□□□□ -0.55
VPS8-207ENST00000436792 TXNDC2Q86VQ3 553 aa11.62□□□□□ -0.55
VPS8-207ENST00000436792 TCEAL9Q9UHQ7 104 aa11.62□□□□□ -0.55
VPS8-207ENST00000436792 MYO15BQ96JP2 1530 aa11.61□□□□□ -0.55
VPS8-207ENST00000436792 IPO8O15397 1037 aaKnown RBP11.61□□□□□ -0.55
VPS8-207ENST00000436792 TNIKQ9UKE5 1360 aa11.6□□□□□ -0.55
VPS8-207ENST00000436792 LRRFIP1Q32MZ4 808 aaKnown RBP11.59□□□□□ -0.55
VPS8-207ENST00000436792 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.59□□□□□ -0.55
VPS8-207ENST00000436792 CCDC34Q96HJ3 373 aa11.59□□□□□ -0.55
VPS8-207ENST00000436792 GOLGA6L22H0YM25 854 aa11.58□□□□□ -0.56
VPS8-207ENST00000436792 DDX10Q13206 875 aaKnown RBP11.58□□□□□ -0.56
VPS8-207ENST00000436792 GNL2Q13823 731 aaKnown RBP11.58□□□□□ -0.56
VPS8-207ENST00000436792 MCCP23508 829 aa11.58□□□□□ -0.56
VPS8-207ENST00000436792 NEXNQ0ZGT2 675 aa11.58□□□□□ -0.56
VPS8-207ENST00000436792 ARHGAP35Q9NRY4 1499 aa11.57□□□□□ -0.56
VPS8-207ENST00000436792 SETD5Q9C0A6 1442 aa11.57□□□□□ -0.56
VPS8-207ENST00000436792 ATAD2BQ9ULI0 1458 aa11.57□□□□□ -0.56
VPS8-207ENST00000436792 VPS37DQ86XT2 251 aa11.57□□□□□ -0.56
VPS8-207ENST00000436792 UBAP1LF5GYI3 381 aa11.57□□□□□ -0.56
VPS8-207ENST00000436792 C16orf71Q8IYS4 520 aaPredicted RBP11.56□□□□□ -0.56
VPS8-207ENST00000436792 STAC3Q96MF2 364 aa11.56□□□□□ -0.56
VPS8-207ENST00000436792 PRM3Q9NNZ6 103 aa11.56□□□□□ -0.56
VPS8-207ENST00000436792 FBXW7Q969H0 707 aa11.56□□□□□ -0.56
VPS8-207ENST00000436792 EVC2Q86UK5 1308 aa11.56□□□□□ -0.56
VPS8-207ENST00000436792 NLRP2Q9NX02 1062 aa11.55□□□□□ -0.56
VPS8-207ENST00000436792 RAPGEF2Q9Y4G8 1499 aa11.55□□□□□ -0.56
VPS8-207ENST00000436792 MARCH6O60337 910 aa11.55□□□□□ -0.56
VPS8-207ENST00000436792 MRC2Q9UBG0 1479 aa11.55□□□□□ -0.56
VPS8-207ENST00000436792 KIAA1211Q6ZU35 1233 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms