RNA–Protein interactions for RNA: ENST00000436636.6

TNIK-204, Transcript of TRAF2 and NCK interacting kinase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNIK, Length 6,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIK-204ENST00000436636 MARCH6O60337 910 aa17.29■□□□□ 0.36
TNIK-204ENST00000436636 GOLGA6L3A6NEY3 463 aa17.29■□□□□ 0.36
TNIK-204ENST00000436636 CHMP4BQ9H444 224 aaKnown RBP17.28■□□□□ 0.36
TNIK-204ENST00000436636 TPD52L1Q16890 204 aaPredicted RBP17.28■□□□□ 0.36
TNIK-204ENST00000436636 PPP1R15AO75807 674 aaPredicted RBP17.28■□□□□ 0.36
TNIK-204ENST00000436636 RDXP35241 583 aaKnown RBP17.28■□□□□ 0.36
TNIK-204ENST00000436636 KIAA1211Q6ZU35 1233 aa17.28■□□□□ 0.36
TNIK-204ENST00000436636 MAPK8IP3Q9UPT6 1336 aa17.27■□□□□ 0.36
TNIK-204ENST00000436636 CALD1Q05682 793 aaKnown RBP17.26■□□□□ 0.35
TNIK-204ENST00000436636 BCCIPQ9P287 314 aaKnown RBP eCLIP17.26■□□□□ 0.35
TNIK-204ENST00000436636 NEFHP12036 1026 aa17.25■□□□□ 0.35
TNIK-204ENST00000436636 EIF4G2P78344 907 aaKnown RBP eCLIP17.25■□□□□ 0.352e-7■■■■■ 41.6
TNIK-204ENST00000436636 CHIC2Q9UKJ5 165 aa17.22■□□□□ 0.35
TNIK-204ENST00000436636 H0YHG0 523 aa17.22■□□□□ 0.35
TNIK-204ENST00000436636 CDR1P51861 262 aa17.22■□□□□ 0.35
TNIK-204ENST00000436636 ZNF592Q92610 1267 aa17.22■□□□□ 0.35
TNIK-204ENST00000436636 SUPT16HQ9Y5B9 1047 aaKnown RBP17.22■□□□□ 0.35
TNIK-204ENST00000436636 RUFY1Q96T51 708 aa17.21■□□□□ 0.35
TNIK-204ENST00000436636 APBB1O00213 710 aa17.2■□□□□ 0.34
TNIK-204ENST00000436636 TPM2P07951 284 aa17.2■□□□□ 0.34
TNIK-204ENST00000436636 AK7Q96M32 723 aa17.2■□□□□ 0.34
TNIK-204ENST00000436636 TMX4Q9H1E5 349 aaPredicted RBP17.18■□□□□ 0.34
TNIK-204ENST00000436636 NEXNQ0ZGT2 675 aa17.17■□□□□ 0.34
TNIK-204ENST00000436636 TPM1P09493 284 aa17.17■□□□□ 0.34
TNIK-204ENST00000436636 PCMTD1Q96MG8 357 aaPredicted RBP17.17■□□□□ 0.34
TNIK-204ENST00000436636 HIRIP3Q9BW71 556 aaPredicted RBP17.17■□□□□ 0.34
TNIK-204ENST00000436636 SLKQ9H2G2 1235 aaPredicted RBP17.17■□□□□ 0.34
TNIK-204ENST00000436636 DCTN1Q14203 1278 aa17.16■□□□□ 0.34
TNIK-204ENST00000436636 CSPP1Q1MSJ5 1256 aa17.16■□□□□ 0.34
TNIK-204ENST00000436636 MS4A1P11836 297 aa17.15■□□□□ 0.34
TNIK-204ENST00000436636 RSPH6AQ9H0K4 717 aa17.14■□□□□ 0.33
TNIK-204ENST00000436636 DHX37Q8IY37 1157 aaKnown RBP17.14■□□□□ 0.33
TNIK-204ENST00000436636 CFAP44Q96MT7 982 aa17.14■□□□□ 0.33
TNIK-204ENST00000436636 SEPT11Q9NVA2 429 aaKnown RBP17.13■□□□□ 0.33
TNIK-204ENST00000436636 DYDC1Q8WWB3 177 aa17.12■□□□□ 0.33
TNIK-204ENST00000436636 SF3A1Q15459 793 aaKnown RBP17.12■□□□□ 0.33
TNIK-204ENST00000436636 PPP4R2Q9NY27 417 aa17.12■□□□□ 0.33
TNIK-204ENST00000436636 G3V3G9 751 aa17.11■□□□□ 0.33
TNIK-204ENST00000436636 DCAF8Q5TAQ9 597 aa17.11■□□□□ 0.33
TNIK-204ENST00000436636 TCEAL9Q9UHQ7 104 aa17.1■□□□□ 0.33
TNIK-204ENST00000436636 NOL8Q76FK4 1167 aaKnown RBP17.1■□□□□ 0.33
TNIK-204ENST00000436636 NUDCQ9Y266 331 aa17.1■□□□□ 0.33
TNIK-204ENST00000436636 SKIDA1Q1XH10 827 aa17.1■□□□□ 0.33
TNIK-204ENST00000436636 ODF2Q5BJF6 829 aa17.1■□□□□ 0.33
TNIK-204ENST00000436636 PODXL2Q9NZ53 605 aa17.1■□□□□ 0.33
TNIK-204ENST00000436636 PHF14O94880 888 aa17.09■□□□□ 0.33
TNIK-204ENST00000436636 IPO7O95373 1038 aaKnown RBP17.09■□□□□ 0.33
TNIK-204ENST00000436636 PAF1Q8N7H5 531 aa17.08■□□□□ 0.32
TNIK-204ENST00000436636 CT47A1Q5JQC4 288 aaPredicted RBP17.08■□□□□ 0.32
TNIK-204ENST00000436636 GOLGA6L19H0YKK7 550 aa17.08■□□□□ 0.32
TNIK-204ENST00000436636 ZRSR2Q15696 482 aaKnown RBP17.08■□□□□ 0.32
TNIK-204ENST00000436636 TIMELESSQ9UNS1 1208 aa17.08■□□□□ 0.32
TNIK-204ENST00000436636 FOXD4L1Q9NU39 408 aa17.07■□□□□ 0.32
TNIK-204ENST00000436636 FAM13BQ9NYF5 915 aa17.07■□□□□ 0.32
TNIK-204ENST00000436636 TOMM22Q9NS69 142 aa17.07■□□□□ 0.32
TNIK-204ENST00000436636 KIF3AQ9Y496 699 aa17.07■□□□□ 0.32
TNIK-204ENST00000436636 ZNF330Q9Y3S2 320 aaPredicted RBP17.07■□□□□ 0.32
TNIK-204ENST00000436636 KNSTRNQ9Y448 316 aa17.07■□□□□ 0.32
TNIK-204ENST00000436636 GORABQ5T7V8 394 aa17.07■□□□□ 0.32
TNIK-204ENST00000436636 FOXD4L5Q5VV16 416 aaPredicted RBP17.06■□□□□ 0.32
TNIK-204ENST00000436636 FOXD4L4Q8WXT5 416 aaPredicted RBP17.06■□□□□ 0.32
TNIK-204ENST00000436636 NAP1L1P55209 391 aaKnown RBP17.06■□□□□ 0.32
TNIK-204ENST00000436636 B4GALNT3Q6L9W6 998 aa17.06■□□□□ 0.32
TNIK-204ENST00000436636 TSPYL1Q9H0U9 437 aa17.06■□□□□ 0.32
TNIK-204ENST00000436636 ACBD3Q9H3P7 528 aa17.06■□□□□ 0.32
TNIK-204ENST00000436636 MIER1Q8N108 512 aa17.05■□□□□ 0.32
TNIK-204ENST00000436636 SOX12O15370 315 aa17.05■□□□□ 0.32
TNIK-204ENST00000436636 HSP90AB2PQ58FF8 381 aa17.05■□□□□ 0.32
TNIK-204ENST00000436636 U2SURPO15042 1029 aaKnown RBP17.05■□□□□ 0.32
TNIK-204ENST00000436636 HOMER1Q86YM7 354 aa17.04■□□□□ 0.32
TNIK-204ENST00000436636 CWC15Q9P013 229 aaKnown RBP17.04■□□□□ 0.32
TNIK-204ENST00000436636 HSP90B2PQ58FF3 399 aa17.04■□□□□ 0.32
TNIK-204ENST00000436636 ZFYVE27Q5T4F4 411 aa17.04■□□□□ 0.32
TNIK-204ENST00000436636 BECN2A8MW95 431 aa17.03■□□□□ 0.32
TNIK-204ENST00000436636 ANKRD62A6NC57 917 aa17.02■□□□□ 0.32
TNIK-204ENST00000436636 CCAR1Q8IX12 1150 aaKnown RBP17.02■□□□□ 0.32
TNIK-204ENST00000436636 BCL11BQ9C0K0 894 aaPredicted RBP17.02■□□□□ 0.32
TNIK-204ENST00000436636 CLASRPQ8N2M8 674 aaKnown RBP17■□□□□ 0.31
TNIK-204ENST00000436636 KCNH8Q96L42 1107 aa16.99■□□□□ 0.31
TNIK-204ENST00000436636 CHMP3Q9Y3E7 222 aa16.99■□□□□ 0.31
TNIK-204ENST00000436636 CCDC97Q96F63 343 aaPredicted RBP16.99■□□□□ 0.31
TNIK-204ENST00000436636 ARGLU1Q9NWB6 273 aaPredicted RBP16.98■□□□□ 0.31
TNIK-204ENST00000436636 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.97■□□□□ 0.31
TNIK-204ENST00000436636 RGL3Q3MIN7 710 aa16.96■□□□□ 0.31
TNIK-204ENST00000436636 INCENPQ9NQS7 918 aa16.96■□□□□ 0.31
TNIK-204ENST00000436636 TRIM6-TRIM34B2RNG4 842 aa16.96■□□□□ 0.31
TNIK-204ENST00000436636 H3BQV1 296 aa16.96■□□□□ 0.31
TNIK-204ENST00000436636 IFFO2Q5TF58 517 aa16.96■□□□□ 0.31
TNIK-204ENST00000436636 NF2P35240 595 aa16.95■□□□□ 0.3
TNIK-204ENST00000436636 MFAP1P55081 439 aaKnown RBP16.95■□□□□ 0.3
TNIK-204ENST00000436636 CTDP1Q9Y5B0 961 aaPredicted RBP16.95■□□□□ 0.3
TNIK-204ENST00000436636 RAD21O60216 631 aa16.95■□□□□ 0.3
TNIK-204ENST00000436636 MNS1Q8NEH6 495 aa16.95■□□□□ 0.3
TNIK-204ENST00000436636 KIF16BQ96L93 1317 aa16.94■□□□□ 0.3
TNIK-204ENST00000436636 ANKRD20A12PQ8NF67 263 aa16.94■□□□□ 0.3
TNIK-204ENST00000436636 CCDC173Q0VFZ6 552 aa16.94■□□□□ 0.3
TNIK-204ENST00000436636 TAF3Q5VWG9 929 aa16.93■□□□□ 0.3
TNIK-204ENST00000436636 GPATCH3Q96I76 525 aa16.93■□□□□ 0.3
TNIK-204ENST00000436636 HMGN5P82970 282 aaKnown RBP16.92■□□□□ 0.3
TNIK-204ENST00000436636 GIMAP7Q8NHV1 300 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms