RNA–Protein interactions for RNA: ENST00000435495.6

PTPN12-206, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2 BASIC

Gene PTPN12, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-206ENST00000435495 DDX27Q96GQ7 796 aaKnown RBP7.04□□□□□ -1.28
PTPN12-206ENST00000435495 ZNF316A6NFI3 1004 aaPredicted RBP7.03□□□□□ -1.28
PTPN12-206ENST00000435495 CRISPLD2Q9H0B8 497 aa7.03□□□□□ -1.28
PTPN12-206ENST00000435495 DPYSL4O14531 572 aa7.02□□□□□ -1.29
PTPN12-206ENST00000435495 MAP3K13O43283 966 aa7.02□□□□□ -1.29
PTPN12-206ENST00000435495 CCDC82Q8N4S0 544 aa7.02□□□□□ -1.29
PTPN12-206ENST00000435495 GPR37O15354 613 aa7□□□□□ -1.29
PTPN12-206ENST00000435495 AKT1S1Q96B36 256 aa7□□□□□ -1.29
PTPN12-206ENST00000435495 EMILIN3Q9NT22 766 aa7□□□□□ -1.29
PTPN12-206ENST00000435495 FECHP22830 423 aa7□□□□□ -1.29
PTPN12-206ENST00000435495 IGSF3O75054 1194 aa6.99□□□□□ -1.29
PTPN12-206ENST00000435495 NLRP6P59044 892 aa6.99□□□□□ -1.29
PTPN12-206ENST00000435495 CCDC9Q9Y3X0 531 aaKnown RBP6.99□□□□□ -1.29
PTPN12-206ENST00000435495 MFSD10Q14728 455 aa6.98□□□□□ -1.29
PTPN12-206ENST00000435495 SMYD5Q6GMV2 418 aa6.98□□□□□ -1.29
PTPN12-206ENST00000435495 PARP9Q8IXQ6 854 aa6.98□□□□□ -1.29
PTPN12-206ENST00000435495 FARP1Q9Y4F1 1045 aaPredicted RBP6.97□□□□□ -1.29
PTPN12-206ENST00000435495 CAMK2BQ13554 666 aa6.97□□□□□ -1.29
PTPN12-206ENST00000435495 CCDC102AQ96A19 550 aa6.96□□□□□ -1.29
PTPN12-206ENST00000435495 ONECUT3O60422 494 aaPredicted RBP6.96□□□□□ -1.3
PTPN12-206ENST00000435495 ZNF579Q8NAF0 562 aaKnown RBP6.96□□□□□ -1.3
PTPN12-206ENST00000435495 PDE4AP27815 886 aa6.95□□□□□ -1.3
PTPN12-206ENST00000435495 TRPC6Q9Y210 931 aa6.95□□□□□ -1.3
PTPN12-206ENST00000435495 CHMP4AQ9BY43 222 aa6.94□□□□□ -1.3
PTPN12-206ENST00000435495 CACNB1Q02641 598 aaPredicted RBP6.93□□□□□ -1.3
PTPN12-206ENST00000435495 CDK11BP21127 795 aaKnown RBP6.93□□□□□ -1.3
PTPN12-206ENST00000435495 POM121Q96HA1 1249 aa6.93□□□□□ -1.3
PTPN12-206ENST00000435495 CDK11AQ9UQ88 783 aaPredicted RBP6.93□□□□□ -1.3
PTPN12-206ENST00000435495 GRXCR2A6NFK2 248 aa6.92□□□□□ -1.3
PTPN12-206ENST00000435495 PPP1R15BQ5SWA1 713 aa6.92□□□□□ -1.3
PTPN12-206ENST00000435495 REPIN1Q9BWE0 567 aaKnown RBP6.92□□□□□ -1.3
PTPN12-206ENST00000435495 SHROOM4Q9ULL8 1493 aa6.92□□□□□ -1.3
PTPN12-206ENST00000435495 PDIA4P13667 645 aaKnown RBP6.92□□□□□ -1.3
PTPN12-206ENST00000435495 ARIH1Q9Y4X5 557 aaPredicted RBP6.92□□□□□ -1.3
PTPN12-206ENST00000435495 SOX12O15370 315 aa6.91□□□□□ -1.3
PTPN12-206ENST00000435495 KIF12Q96FN5 646 aa6.91□□□□□ -1.3
PTPN12-206ENST00000435495 ZNF777Q9ULD5 760 aaPredicted RBP6.91□□□□□ -1.3
PTPN12-206ENST00000435495 DSG2Q14126 1118 aa6.91□□□□□ -1.3
PTPN12-206ENST00000435495 NUTM2FA1L443 756 aa6.9□□□□□ -1.3
PTPN12-206ENST00000435495 MS4A1P11836 297 aa6.9□□□□□ -1.3
PTPN12-206ENST00000435495 TTLL12Q14166 644 aaPredicted RBP6.9□□□□□ -1.31
PTPN12-206ENST00000435495 ZNF428Q96B54 188 aa6.9□□□□□ -1.31
PTPN12-206ENST00000435495 ZBTB7CA1YPR0 619 aa6.88□□□□□ -1.31
PTPN12-206ENST00000435495 RBM42Q9BTD8 480 aaKnown RBP6.88□□□□□ -1.31
PTPN12-206ENST00000435495 PDIA6Q15084 440 aa6.88□□□□□ -1.31
PTPN12-206ENST00000435495 DPY19L2Q6NUT2 758 aa6.88□□□□□ -1.31
PTPN12-206ENST00000435495 PRIM1P49642 420 aaKnown RBP6.87□□□□□ -1.31
PTPN12-206ENST00000435495 NLRP7Q8WX94 980 aa6.87□□□□□ -1.31
PTPN12-206ENST00000435495 PHF12Q96QT6 1004 aa6.87□□□□□ -1.31
PTPN12-206ENST00000435495 IRF6O14896 467 aa6.87□□□□□ -1.31
PTPN12-206ENST00000435495 TRAK2O60296 914 aa6.87□□□□□ -1.31
PTPN12-206ENST00000435495 PRKAR2AP13861 404 aaKnown RBP6.87□□□□□ -1.31
PTPN12-206ENST00000435495 MCM6Q14566 821 aa6.86□□□□□ -1.31
PTPN12-206ENST00000435495 AEBP1Q8IUX7 1158 aa6.86□□□□□ -1.31
PTPN12-206ENST00000435495 DDX12PQ92771 950 aa6.85□□□□□ -1.31
PTPN12-206ENST00000435495 MAP2K5Q13163 448 aa6.85□□□□□ -1.31
PTPN12-206ENST00000435495 KCTD17Q8N5Z5 321 aa6.85□□□□□ -1.31
PTPN12-206ENST00000435495 DDRGK1Q96HY6 314 aa6.85□□□□□ -1.31
PTPN12-206ENST00000435495 GPHNQ9NQX3 736 aaPredicted RBP6.85□□□□□ -1.31
PTPN12-206ENST00000435495 HSP90B1P14625 803 aaKnown RBP6.84□□□□□ -1.31
PTPN12-206ENST00000435495 GIGYF2Q6Y7W6 1299 aaKnown RBP6.84□□□□□ -1.31
PTPN12-206ENST00000435495 UPF1Q92900 1129 aaKnown RBP eCLIP6.84□□□□□ -1.31
PTPN12-206ENST00000435495 TMEM106CQ9BVX2 250 aa6.84□□□□□ -1.31
PTPN12-206ENST00000435495 AMHR2Q16671 573 aa6.83□□□□□ -1.32
PTPN12-206ENST00000435495 FBXO31Q5XUX0 539 aaPredicted RBP6.82□□□□□ -1.32
PTPN12-206ENST00000435495 PHOX2BQ99453 314 aa6.82□□□□□ -1.32
PTPN12-206ENST00000435495 FAM161AQ3B820 660 aa6.82□□□□□ -1.32
PTPN12-206ENST00000435495 HMGB1P09429 215 aaKnown RBP6.81□□□□□ -1.32
PTPN12-206ENST00000435495 PROCA1Q8NCQ7 364 aaPredicted RBP6.81□□□□□ -1.32
PTPN12-206ENST00000435495 MINK1Q8N4C8 1332 aaPredicted RBP6.81□□□□□ -1.32
PTPN12-206ENST00000435495 OSBPP22059 807 aa6.81□□□□□ -1.32
PTPN12-206ENST00000435495 GOLGA2Q08379 1002 aa6.81□□□□□ -1.32
PTPN12-206ENST00000435495 FLIIQ13045 1269 aa6.81□□□□□ -1.32
PTPN12-206ENST00000435495 GNPATO15228 680 aa6.8□□□□□ -1.32
PTPN12-206ENST00000435495 FOXD4L5Q5VV16 416 aaPredicted RBP6.8□□□□□ -1.32
PTPN12-206ENST00000435495 FOXD4L4Q8WXT5 416 aaPredicted RBP6.8□□□□□ -1.32
PTPN12-206ENST00000435495 RETREG2Q8NC44 543 aa6.8□□□□□ -1.32
PTPN12-206ENST00000435495 RAD21O60216 631 aa6.79□□□□□ -1.32
PTPN12-206ENST00000435495 DHX37Q8IY37 1157 aaKnown RBP6.79□□□□□ -1.32
PTPN12-206ENST00000435495 POLR3EQ9NVU0 708 aa6.79□□□□□ -1.32
PTPN12-206ENST00000435495 CARNS1A5YM72 827 aa6.78□□□□□ -1.32
PTPN12-206ENST00000435495 IRF5Q13568 498 aa6.78□□□□□ -1.32
PTPN12-206ENST00000435495 PROSER2Q86WR7 435 aaPredicted RBP6.78□□□□□ -1.32
PTPN12-206ENST00000435495 MTMR7Q9Y216 660 aa6.78□□□□□ -1.32
PTPN12-206ENST00000435495 FNBP4Q8N3X1 1017 aaPredicted RBP6.77□□□□□ -1.33
PTPN12-206ENST00000435495 PUS7Q96PZ0 661 aaKnown RBP6.77□□□□□ -1.33
PTPN12-206ENST00000435495 CDHR5Q9HBB8 845 aa6.77□□□□□ -1.33
PTPN12-206ENST00000435495 OXER1Q8TDS5 423 aa6.77□□□□□ -1.33
PTPN12-206ENST00000435495 ATP1B4Q9UN42 357 aaPredicted RBP6.77□□□□□ -1.33
PTPN12-206ENST00000435495 A6NJR5 290 aa6.76□□□□□ -1.33
PTPN12-206ENST00000435495 C2orf72A6NCS6 295 aa6.76□□□□□ -1.33
PTPN12-206ENST00000435495 PLPP6Q8IY26 295 aa6.76□□□□□ -1.33
PTPN12-206ENST00000435495 MS4A3Q96HJ5 214 aa6.76□□□□□ -1.33
PTPN12-206ENST00000435495 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.76□□□□□ -1.332e-7■■■■□ 19.3
PTPN12-206ENST00000435495 ZRANB1Q9UGI0 708 aa6.75□□□□□ -1.33
PTPN12-206ENST00000435495 MDM2Q00987 491 aaPredicted RBP6.75□□□□□ -1.33
PTPN12-206ENST00000435495 UBE2Q2Q8WVN8 375 aa6.75□□□□□ -1.33
PTPN12-206ENST00000435495 HIC1Q14526 733 aa6.74□□□□□ -1.33
PTPN12-206ENST00000435495 MICALL2Q8IY33 904 aa6.74□□□□□ -1.33
PTPN12-206ENST00000435495 SNRKQ9NRH2 765 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms