RNA–Protein interactions for RNA: ENST00000435432.6

NEDD4L-207, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-207ENST00000435432 PSMD1Q99460 953 aa11.22□□□□□ -0.61
NEDD4L-207ENST00000435432 NAP1L2Q9ULW6 460 aaPredicted RBP11.22□□□□□ -0.61
NEDD4L-207ENST00000435432 PPM1GO15355 546 aaPredicted RBP11.21□□□□□ -0.61
NEDD4L-207ENST00000435432 TOPBP1Q92547 1522 aa11.21□□□□□ -0.61
NEDD4L-207ENST00000435432 SHROOM2Q13796 1616 aa11.21□□□□□ -0.62
NEDD4L-207ENST00000435432 NCLP19338 710 aaKnown RBP11.2□□□□□ -0.62
NEDD4L-207ENST00000435432 KIF13AQ9H1H9 1805 aa11.2□□□□□ -0.62
NEDD4L-207ENST00000435432 RGS22Q8NE09 1264 aa11.19□□□□□ -0.62
NEDD4L-207ENST00000435432 ARID4BQ4LE39 1312 aaPredicted RBP11.18□□□□□ -0.62
NEDD4L-207ENST00000435432 KDM4AO75164 1064 aa11.18□□□□□ -0.62
NEDD4L-207ENST00000435432 CHMP4BQ9H444 224 aaKnown RBP11.18□□□□□ -0.62
NEDD4L-207ENST00000435432 KCNG1Q9UIX4 513 aa11.18□□□□□ -0.62
NEDD4L-207ENST00000435432 FAM43BQ6ZT52 329 aaPredicted RBP11.18□□□□□ -0.62
NEDD4L-207ENST00000435432 SECISBP2LQ93073 1101 aaKnown RBP11.18□□□□□ -0.62
NEDD4L-207ENST00000435432 WWC1Q8IX03 1113 aa11.17□□□□□ -0.62
NEDD4L-207ENST00000435432 MAPKBP1O60336 1514 aa11.16□□□□□ -0.62
NEDD4L-207ENST00000435432 FGD5Q6ZNL6 1462 aa11.16□□□□□ -0.62
NEDD4L-207ENST00000435432 PKD2Q13563 968 aa11.15□□□□□ -0.62
NEDD4L-207ENST00000435432 POLA1P09884 1462 aaPredicted RBP11.14□□□□□ -0.63
NEDD4L-207ENST00000435432 CLSTN1O94985 981 aa11.14□□□□□ -0.63
NEDD4L-207ENST00000435432 SOGA1O94964 1423 aa11.12□□□□□ -0.63
NEDD4L-207ENST00000435432 RUSC2Q8N2Y8 1516 aa11.11□□□□□ -0.63
NEDD4L-207ENST00000435432 AEBP1Q8IUX7 1158 aa11.1□□□□□ -0.63
NEDD4L-207ENST00000435432 ABCA10Q8WWZ4 1543 aa11.08□□□□□ -0.64
NEDD4L-207ENST00000435432 RAD54L2Q9Y4B4 1467 aa11.08□□□□□ -0.64
NEDD4L-207ENST00000435432 APBB1O00213 710 aa11.08□□□□□ -0.64
NEDD4L-207ENST00000435432 ABCA5Q8WWZ7 1642 aa11.06□□□□□ -0.64
NEDD4L-207ENST00000435432 SYNJ2O15056 1496 aa11.06□□□□□ -0.64
NEDD4L-207ENST00000435432 GLI2P10070 1586 aa11.05□□□□□ -0.64
NEDD4L-207ENST00000435432 CCDC27Q2M243 656 aa11.05□□□□□ -0.64
NEDD4L-207ENST00000435432 TEX2Q8IWB9 1127 aa11.05□□□□□ -0.64
NEDD4L-207ENST00000435432 EEA1Q15075 1411 aa11.04□□□□□ -0.64
NEDD4L-207ENST00000435432 PBRM1Q86U86 1689 aa11.04□□□□□ -0.64
NEDD4L-207ENST00000435432 PLCD4Q9BRC7 762 aa11.03□□□□□ -0.64
NEDD4L-207ENST00000435432 NEUROD2Q15784 382 aa11.02□□□□□ -0.65
NEDD4L-207ENST00000435432 ZNF608Q9ULD9 1512 aaPredicted RBP11.01□□□□□ -0.65
NEDD4L-207ENST00000435432 GAPVD1Q14C86 1478 aa11□□□□□ -0.65
NEDD4L-207ENST00000435432 KIF27Q86VH2 1401 aa11□□□□□ -0.65
NEDD4L-207ENST00000435432 KIF21BO75037 1637 aa10.99□□□□□ -0.65
NEDD4L-207ENST00000435432 DIP2BQ9P265 1576 aa10.99□□□□□ -0.65
NEDD4L-207ENST00000435432 GRIN2BQ13224 1484 aa10.99□□□□□ -0.65
NEDD4L-207ENST00000435432 ABCC10Q5T3U5 1492 aa10.98□□□□□ -0.65
NEDD4L-207ENST00000435432 FAM50AQ14320 339 aaKnown RBP10.98□□□□□ -0.65
NEDD4L-207ENST00000435432 FAM9BQ8IZU0 186 aa10.97□□□□□ -0.65
NEDD4L-207ENST00000435432 RNF216Q9NWF9 866 aaPredicted RBP10.97□□□□□ -0.65
NEDD4L-207ENST00000435432 OS9Q13438 667 aaPredicted RBP10.97□□□□□ -0.65
NEDD4L-207ENST00000435432 BBXQ8WY36 941 aaPredicted RBP10.97□□□□□ -0.65
NEDD4L-207ENST00000435432 PRXQ9BXM0 1461 aa10.97□□□□□ -0.65
NEDD4L-207ENST00000435432 KDM6BO15054 1643 aa10.96□□□□□ -0.65
NEDD4L-207ENST00000435432 IGF1RP08069 1367 aa10.96□□□□□ -0.66
NEDD4L-207ENST00000435432 ERICH3Q5RHP9 1530 aa10.96□□□□□ -0.66
NEDD4L-207ENST00000435432 ZNF316A6NFI3 1004 aaPredicted RBP10.95□□□□□ -0.66
NEDD4L-207ENST00000435432 PPARGC1BQ86YN6 1023 aaKnown RBP10.95□□□□□ -0.66
NEDD4L-207ENST00000435432 MFAP1P55081 439 aaKnown RBP10.94□□□□□ -0.66
NEDD4L-207ENST00000435432 TDRD9Q8NDG6 1382 aaKnown RBP10.94□□□□□ -0.66
NEDD4L-207ENST00000435432 GLIPR1L2Q4G1C9 344 aa10.94□□□□□ -0.66
NEDD4L-207ENST00000435432 ERICH6BQ5W0A0 696 aa10.94□□□□□ -0.66
NEDD4L-207ENST00000435432 CC2D2BQ6DHV5 1058 aa10.94□□□□□ -0.66
NEDD4L-207ENST00000435432 CUL7Q14999 1698 aa10.94□□□□□ -0.66
NEDD4L-207ENST00000435432 ILDR1Q86SU0 546 aaPredicted RBP10.94□□□□□ -0.66
NEDD4L-207ENST00000435432 KIAA0586Q9BVV6 1533 aa10.94□□□□□ -0.66
NEDD4L-207ENST00000435432 CHRM1P11229 460 aaPredicted RBP10.93□□□□□ -0.66
NEDD4L-207ENST00000435432 FOXD1Q16676 465 aa10.93□□□□□ -0.66
NEDD4L-207ENST00000435432 FOXD4L1Q9NU39 408 aa10.93□□□□□ -0.66
NEDD4L-207ENST00000435432 NUP160Q12769 1436 aa10.93□□□□□ -0.66
NEDD4L-207ENST00000435432 AQRO60306 1485 aaKnown RBP eCLIP10.93□□□□□ -0.664e-8■■■□□ 16.5
NEDD4L-207ENST00000435432 IPO4Q8TEX9 1081 aaKnown RBP10.92□□□□□ -0.66
NEDD4L-207ENST00000435432 RAPGEF2Q9Y4G8 1499 aa10.92□□□□□ -0.66
NEDD4L-207ENST00000435432 ANAPC15P60006 121 aa10.91□□□□□ -0.66
NEDD4L-207ENST00000435432 SPRYD3Q8NCJ5 442 aa10.9□□□□□ -0.66
NEDD4L-207ENST00000435432 ADAMTS12P58397 1594 aa10.89□□□□□ -0.67
NEDD4L-207ENST00000435432 HECW2Q9P2P5 1572 aa10.89□□□□□ -0.67
NEDD4L-207ENST00000435432 CCDC82Q8N4S0 544 aa10.89□□□□□ -0.67
NEDD4L-207ENST00000435432 GOLGA3Q08378 1498 aa10.89□□□□□ -0.67
NEDD4L-207ENST00000435432 FOXD4L6Q3SYB3 417 aaPredicted RBP10.89□□□□□ -0.67
NEDD4L-207ENST00000435432 FOXD4L3Q6VB84 417 aaPredicted RBP10.89□□□□□ -0.67
NEDD4L-207ENST00000435432 SNAPC4Q5SXM2 1469 aa10.88□□□□□ -0.67
NEDD4L-207ENST00000435432 CEP170Q5SW79 1584 aa10.88□□□□□ -0.67
NEDD4L-207ENST00000435432 PATL2C9JE40 543 aaKnown RBP10.88□□□□□ -0.67
NEDD4L-207ENST00000435432 FBXO41Q8TF61 875 aa10.88□□□□□ -0.67
NEDD4L-207ENST00000435432 GZF1Q9H116 711 aaPredicted RBP10.88□□□□□ -0.67
NEDD4L-207ENST00000435432 TMCO4Q5TGY1 634 aa10.86□□□□□ -0.67
NEDD4L-207ENST00000435432 BRD1O95696 1058 aa10.86□□□□□ -0.67
NEDD4L-207ENST00000435432 CARMIL1Q5VZK9 1371 aa10.86□□□□□ -0.67
NEDD4L-207ENST00000435432 CYB5RLQ6IPT4 315 aa10.86□□□□□ -0.67
NEDD4L-207ENST00000435432 IFNLR1Q8IU57 520 aaPredicted RBP10.86□□□□□ -0.67
NEDD4L-207ENST00000435432 FTSJ3Q8IY81 847 aaKnown RBP10.84□□□□□ -0.67
NEDD4L-207ENST00000435432 PPP4R3CPQ6ZMV5 832 aa10.84□□□□□ -0.67
NEDD4L-207ENST00000435432 IQSEC2Q5JU85 1478 aa10.84□□□□□ -0.67
NEDD4L-207ENST00000435432 GRIPAP1Q4V328 841 aa10.83□□□□□ -0.68
NEDD4L-207ENST00000435432 GPATCH11Q8N954 259 aa10.83□□□□□ -0.68
NEDD4L-207ENST00000435432 SGSM3Q96HU1 749 aa10.83□□□□□ -0.68
NEDD4L-207ENST00000435432 FHAD1B1AJZ9 1412 aa10.83□□□□□ -0.68
NEDD4L-207ENST00000435432 SMARCA5O60264 1052 aaPredicted RBP10.83□□□□□ -0.68
NEDD4L-207ENST00000435432 TNIKQ9UKE5 1360 aa10.83□□□□□ -0.68
NEDD4L-207ENST00000435432 PPRC1Q5VV67 1664 aaKnown RBP10.82□□□□□ -0.68
NEDD4L-207ENST00000435432 CTTNBP2Q8WZ74 1663 aa10.82□□□□□ -0.68
NEDD4L-207ENST00000435432 PTMSP20962 102 aa10.81□□□□□ -0.68
NEDD4L-207ENST00000435432 CDCA8Q53HL2 280 aa10.81□□□□□ -0.68
NEDD4L-207ENST00000435432 ACIN1Q9UKV3 1341 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms