RNA–Protein interactions for RNA: ENST00000433655.5

CTSD-204, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 2,006 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-204ENST00000433655 ITSN2Q9NZM3 1697 aa24.41■■□□□ 1.5
CTSD-204ENST00000433655 ABCA8O94911 1581 aa24.41■■□□□ 1.5
CTSD-204ENST00000433655 ROCK1Q13464 1354 aa24.4■■□□□ 1.5
CTSD-204ENST00000433655 CDK11AQ9UQ88 783 aaPredicted RBP24.4■■□□□ 1.5
CTSD-204ENST00000433655 ZNF644Q9H582 1327 aaPredicted RBP24.38■■□□□ 1.49
CTSD-204ENST00000433655 GPATCH8Q9UKJ3 1502 aaKnown RBP24.35■■□□□ 1.49
CTSD-204ENST00000433655 CAMSAP2Q08AD1 1489 aa24.35■■□□□ 1.49
CTSD-204ENST00000433655 CROCC2H7BZ55 1655 aa24.33■■□□□ 1.49
CTSD-204ENST00000433655 ADGBQ8N7X0 1667 aa24.31■■□□□ 1.48
CTSD-204ENST00000433655 CHD1O14646 1710 aa24.3■■□□□ 1.48
CTSD-204ENST00000433655 TRIM52Q96A61 297 aa24.29■■□□□ 1.48
CTSD-204ENST00000433655 CDC42BPAQ5VT25 1732 aa24.29■■□□□ 1.48
CTSD-204ENST00000433655 ATP10BO94823 1461 aa24.28■■□□□ 1.48
CTSD-204ENST00000433655 MPHOSPH9Q99550 1183 aa24.28■■□□□ 1.48
CTSD-204ENST00000433655 HIRIP3Q9BW71 556 aaPredicted RBP24.26■■□□□ 1.47
CTSD-204ENST00000433655 ABCC10Q5T3U5 1492 aa24.26■■□□□ 1.47
CTSD-204ENST00000433655 DDX10Q13206 875 aaKnown RBP24.25■■□□□ 1.47
CTSD-204ENST00000433655 CFDP1Q9UEE9 299 aaPredicted RBP24.23■■□□□ 1.47
CTSD-204ENST00000433655 ADGRL2O95490 1459 aa24.23■■□□□ 1.47
CTSD-204ENST00000433655 NCOA1Q15788 1441 aa24.2■■□□□ 1.46
CTSD-204ENST00000433655 SHROOM2Q13796 1616 aa24.19■■□□□ 1.46
CTSD-204ENST00000433655 ANKRD30BQ9BXX2 1392 aa24.18■■□□□ 1.46
CTSD-204ENST00000433655 FOXD1Q16676 465 aa24.17■■□□□ 1.46
CTSD-204ENST00000433655 KCNH8Q96L42 1107 aa24.17■■□□□ 1.46
CTSD-204ENST00000433655 PZPP20742 1482 aa24.17■■□□□ 1.46
CTSD-204ENST00000433655 RPRD2Q5VT52 1461 aaKnown RBP24.15■■□□□ 1.46
CTSD-204ENST00000433655 PLEKHD1A6NEE1 506 aa24.14■■□□□ 1.45
CTSD-204ENST00000433655 PTPRGP23470 1445 aa24.14■■□□□ 1.45
CTSD-204ENST00000433655 TEX14Q8IWB6 1497 aa24.12■■□□□ 1.45
CTSD-204ENST00000433655 ZNF777Q9ULD5 760 aaPredicted RBP24.12■■□□□ 1.45
CTSD-204ENST00000433655 SHANK2Q9UPX8 1470 aa24.11■■□□□ 1.45
CTSD-204ENST00000433655 L3MBTL2Q969R5 705 aa24.08■■□□□ 1.45
CTSD-204ENST00000433655 CDC42BPBQ9Y5S2 1711 aa24.06■■□□□ 1.44
CTSD-204ENST00000433655 ANKRD30AQ9BXX3 1397 aa24.06■■□□□ 1.44
CTSD-204ENST00000433655 PREX2Q70Z35 1606 aa24.06■■□□□ 1.44
CTSD-204ENST00000433655 SLC4A1APQ9BWU0 796 aaKnown RBP24.06■■□□□ 1.44
CTSD-204ENST00000433655 ERCC6L2Q5T890 1561 aa24.06■■□□□ 1.44
CTSD-204ENST00000433655 ARHGEF5Q12774 1597 aa24.05■■□□□ 1.44
CTSD-204ENST00000433655 C9orf84Q5VXU9 1444 aa24.04■■□□□ 1.44
CTSD-204ENST00000433655 SAMD9LQ8IVG5 1584 aa24.03■■□□□ 1.44
CTSD-204ENST00000433655 ANKRD50Q9ULJ7 1429 aa24.02■■□□□ 1.44
CTSD-204ENST00000433655 HSPA5P11021 654 aaKnown RBP24.01■■□□□ 1.43
CTSD-204ENST00000433655 MBD5Q9P267 1494 aa24■■□□□ 1.43
CTSD-204ENST00000433655 KIAA1107Q9UPP5 1409 aa23.99■■□□□ 1.43
CTSD-204ENST00000433655 CCER2I3L3R5 266 aa23.98■■□□□ 1.43
CTSD-204ENST00000433655 TTC37Q6PGP7 1564 aa23.97■■□□□ 1.43
CTSD-204ENST00000433655 NBPF8Q3BBV2 869 aa23.97■■□□□ 1.43
CTSD-204ENST00000433655 ABCC2Q92887 1545 aa23.97■■□□□ 1.43
CTSD-204ENST00000433655 KDM5DQ9BY66 1539 aa23.97■■□□□ 1.43
CTSD-204ENST00000433655 ANP32CO43423 234 aa23.96■■□□□ 1.43
CTSD-204ENST00000433655 WASHC2AQ641Q2 1341 aa23.96■■□□□ 1.43
CTSD-204ENST00000433655 CLASP1Q7Z460 1538 aa23.95■■□□□ 1.42
CTSD-204ENST00000433655 EIF4G2P78344 907 aaKnown RBP eCLIP23.93■■□□□ 1.42
CTSD-204ENST00000433655 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.93■■□□□ 1.425e-7■■■■□ 21.6
CTSD-204ENST00000433655 CCDC141Q6ZP82 1450 aa23.92■■□□□ 1.42
CTSD-204ENST00000433655 HNRNPMP52272 730 aaKnown RBP eCLIP23.91■■□□□ 1.42
CTSD-204ENST00000433655 POLR1AO95602 1720 aaPredicted RBP23.9■■□□□ 1.42
CTSD-204ENST00000433655 PKD2Q13563 968 aa23.89■■□□□ 1.41
CTSD-204ENST00000433655 SPATA31E1Q6ZUB1 1445 aa23.89■■□□□ 1.41
CTSD-204ENST00000433655 KIF15Q9NS87 1388 aa23.88■■□□□ 1.41
CTSD-204ENST00000433655 MYO5CQ9NQX4 1742 aa23.88■■□□□ 1.41
CTSD-204ENST00000433655 SYCP2Q9BX26 1530 aa23.87■■□□□ 1.41
CTSD-204ENST00000433655 MAST1Q9Y2H9 1570 aa23.86■■□□□ 1.41
CTSD-204ENST00000433655 TSPY4P0CV99 314 aa23.86■■□□□ 1.41
CTSD-204ENST00000433655 TSPY10P0CW01 314 aa23.86■■□□□ 1.41
CTSD-204ENST00000433655 NUP155O75694 1391 aa23.86■■□□□ 1.41
CTSD-204ENST00000433655 PELP1Q8IZL8 1130 aaKnown RBP23.85■■□□□ 1.41
CTSD-204ENST00000433655 ARHGAP5Q13017 1502 aa23.85■■□□□ 1.41
CTSD-204ENST00000433655 ZCCHC11Q5TAX3 1644 aaKnown RBP23.85■■□□□ 1.41
CTSD-204ENST00000433655 C11orf95C9JLR9 678 aaPredicted RBP23.84■■□□□ 1.41
CTSD-204ENST00000433655 CNTLNQ9NXG0 1405 aa23.83■■□□□ 1.41
CTSD-204ENST00000433655 CCDC7Q96M83 1385 aa23.83■■□□□ 1.4
CTSD-204ENST00000433655 UHRF1BP1LA0JNW5 1464 aa23.8■■□□□ 1.4
CTSD-204ENST00000433655 SUPT16HQ9Y5B9 1047 aaKnown RBP23.8■■□□□ 1.4
CTSD-204ENST00000433655 UNC13BO14795 1591 aa23.78■■□□□ 1.4
CTSD-204ENST00000433655 PLXNC1O60486 1568 aa23.78■■□□□ 1.4
CTSD-204ENST00000433655 RSPH4AQ5TD94 716 aa23.77■■□□□ 1.4
CTSD-204ENST00000433655 FAM135AQ9P2D6 1515 aa23.77■■□□□ 1.4
CTSD-204ENST00000433655 ARHGEF12Q9NZN5 1544 aa23.76■■□□□ 1.39
CTSD-204ENST00000433655 UHRF1BP1Q6BDS2 1440 aa23.75■■□□□ 1.39
CTSD-204ENST00000433655 KDM5CP41229 1560 aa23.74■■□□□ 1.39
CTSD-204ENST00000433655 BCORL1Q5H9F3 1711 aa23.74■■□□□ 1.39
CTSD-204ENST00000433655 PLEKHH2Q8IVE3 1493 aa23.74■■□□□ 1.39
CTSD-204ENST00000433655 KIF7Q2M1P5 1343 aa23.71■■□□□ 1.39
CTSD-204ENST00000433655 RALGAPBQ86X10 1494 aa23.71■■□□□ 1.39
CTSD-204ENST00000433655 PLCH2O75038 1416 aa23.69■■□□□ 1.38
CTSD-204ENST00000433655 ABCC1P33527 1531 aa23.68■■□□□ 1.38
CTSD-204ENST00000433655 USP47Q96K76 1375 aa23.67■■□□□ 1.38
CTSD-204ENST00000433655 IQGAP3Q86VI3 1631 aa23.67■■□□□ 1.38
CTSD-204ENST00000433655 MAGI2Q86UL8 1455 aa23.64■■□□□ 1.37
CTSD-204ENST00000433655 ZNF326Q5BKZ1 582 aaKnown RBP23.64■■□□□ 1.37
CTSD-204ENST00000433655 DUOX2Q9NRD8 1548 aa23.64■■□□□ 1.37
CTSD-204ENST00000433655 PLA2R1Q13018 1463 aa23.62■■□□□ 1.37
CTSD-204ENST00000433655 PRKRIP1Q9H875 184 aaPredicted RBP23.6■■□□□ 1.37
CTSD-204ENST00000433655 CCDC184Q52MB2 194 aa23.59■■□□□ 1.37
CTSD-204ENST00000433655 ARAP3Q8WWN8 1544 aa23.59■■□□□ 1.37
CTSD-204ENST00000433655 ERBINQ96RT1 1412 aa23.59■■□□□ 1.37
CTSD-204ENST00000433655 TRAPPC8Q9Y2L5 1435 aa23.58■■□□□ 1.36
CTSD-204ENST00000433655 TRPM1Q7Z4N2 1603 aa23.56■■□□□ 1.36
CTSD-204ENST00000433655 EFCAB2Q5VUJ9 269 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms