RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 ABCC2Q92887 1545 aa28.63■■■□□ 2.17
VRK2-205ENST00000432057 RRP7BPQ9NSQ0 103 aa28.62■■■□□ 2.17
VRK2-205ENST00000432057 ABCC5O15440 1437 aa28.61■■■□□ 2.17
VRK2-205ENST00000432057 ADGBQ8N7X0 1667 aa28.61■■■□□ 2.17
VRK2-205ENST00000432057 CFDP1Q9UEE9 299 aaPredicted RBP28.57■■■□□ 2.16
VRK2-205ENST00000432057 DIEXFQ68CQ4 756 aaKnown RBP28.53■■■□□ 2.16
VRK2-205ENST00000432057 ROCK1Q13464 1354 aa28.53■■■□□ 2.16
VRK2-205ENST00000432057 CDC42BPBQ9Y5S2 1711 aa28.52■■■□□ 2.16
VRK2-205ENST00000432057 PREX2Q70Z35 1606 aa28.52■■■□□ 2.16
VRK2-205ENST00000432057 SIN3AQ96ST3 1273 aa28.52■■■□□ 2.16
VRK2-205ENST00000432057 ZCCHC11Q5TAX3 1644 aaKnown RBP28.52■■■□□ 2.16
VRK2-205ENST00000432057 OSCARQ8IYS5 282 aa28.5■■■□□ 2.15
VRK2-205ENST00000432057 ZNF777Q9ULD5 760 aaPredicted RBP28.49■■■□□ 2.15
VRK2-205ENST00000432057 TTC37Q6PGP7 1564 aa28.47■■■□□ 2.15
VRK2-205ENST00000432057 NEUROD1Q13562 356 aa28.46■■■□□ 2.15
VRK2-205ENST00000432057 UHRF1BP1LA0JNW5 1464 aa28.45■■■□□ 2.14
VRK2-205ENST00000432057 MYO5CQ9NQX4 1742 aa28.43■■■□□ 2.14
VRK2-205ENST00000432057 ADGRL2O95490 1459 aa28.42■■■□□ 2.14
VRK2-205ENST00000432057 SAMD9LQ8IVG5 1584 aa28.42■■■□□ 2.14
VRK2-205ENST00000432057 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.41■■■□□ 2.14
VRK2-205ENST00000432057 DENND4BO75064 1496 aaPredicted RBP28.41■■■□□ 2.14
VRK2-205ENST00000432057 KDM5BQ9UGL1 1544 aa28.38■■■□□ 2.13
VRK2-205ENST00000432057 ARHGEF5Q12774 1597 aa28.37■■■□□ 2.13
VRK2-205ENST00000432057 TRIM52Q96A61 297 aa28.37■■■□□ 2.13
VRK2-205ENST00000432057 SHANK2Q9UPX8 1470 aa28.37■■■□□ 2.13
VRK2-205ENST00000432057 NCOA1Q15788 1441 aa28.36■■■□□ 2.13
VRK2-205ENST00000432057 TIMELESSQ9UNS1 1208 aa28.32■■■□□ 2.12
VRK2-205ENST00000432057 ARHGAP5Q13017 1502 aa28.31■■■□□ 2.12
VRK2-205ENST00000432057 C9orf84Q5VXU9 1444 aa28.3■■■□□ 2.12
VRK2-205ENST00000432057 ANKRD30AQ9BXX3 1397 aa28.29■■■□□ 2.12
VRK2-205ENST00000432057 MBD5Q9P267 1494 aa28.28■■■□□ 2.12
VRK2-205ENST00000432057 TONSLQ96HA7 1378 aa28.27■■■□□ 2.12
VRK2-205ENST00000432057 SYCP2Q9BX26 1530 aa28.26■■■□□ 2.11
VRK2-205ENST00000432057 MPHOSPH9Q99550 1183 aa28.26■■■□□ 2.11
VRK2-205ENST00000432057 CCDC141Q6ZP82 1450 aa28.24■■■□□ 2.11
VRK2-205ENST00000432057 ACIN1Q9UKV3 1341 aaKnown RBP28.24■■■□□ 2.11
VRK2-205ENST00000432057 HNRNPMP52272 730 aaKnown RBP eCLIP28.23■■■□□ 2.11
VRK2-205ENST00000432057 KCNH8Q96L42 1107 aa28.21■■■□□ 2.11
VRK2-205ENST00000432057 PZPP20742 1482 aa28.2■■■□□ 2.11
VRK2-205ENST00000432057 PPP1R15AO75807 674 aaPredicted RBP28.19■■■□□ 2.1
VRK2-205ENST00000432057 ANKRD50Q9ULJ7 1429 aa28.18■■■□□ 2.1
VRK2-205ENST00000432057 MAST1Q9Y2H9 1570 aa28.17■■■□□ 2.1
VRK2-205ENST00000432057 TSPY4P0CV99 314 aa28.15■■■□□ 2.1
VRK2-205ENST00000432057 TSPY10P0CW01 314 aa28.15■■■□□ 2.1
VRK2-205ENST00000432057 FOXD1Q16676 465 aa28.15■■■□□ 2.1
VRK2-205ENST00000432057 PLEKHH2Q8IVE3 1493 aa28.13■■■□□ 2.09
VRK2-205ENST00000432057 PLCH2O75038 1416 aa28.13■■■□□ 2.09
VRK2-205ENST00000432057 WDR7Q9Y4E6 1490 aa28.13■■■□□ 2.09
VRK2-205ENST00000432057 KIF15Q9NS87 1388 aa28.12■■■□□ 2.09
VRK2-205ENST00000432057 SLC4A1APQ9BWU0 796 aaKnown RBP28.11■■■□□ 2.09
VRK2-205ENST00000432057 ANKRD30BQ9BXX2 1392 aa28.1■■■□□ 2.09
VRK2-205ENST00000432057 ABCC1P33527 1531 aa28.1■■■□□ 2.09
VRK2-205ENST00000432057 KIAA1107Q9UPP5 1409 aa28.09■■■□□ 2.09
VRK2-205ENST00000432057 ARHGEF12Q9NZN5 1544 aa28.09■■■□□ 2.09
VRK2-205ENST00000432057 PLXNC1O60486 1568 aa28.08■■■□□ 2.09
VRK2-205ENST00000432057 KDM5DQ9BY66 1539 aa28.07■■■□□ 2.08
VRK2-205ENST00000432057 RSPH4AQ5TD94 716 aa28.07■■■□□ 2.08
VRK2-205ENST00000432057 ABCA9Q8IUA7 1624 aa28.06■■■□□ 2.08
VRK2-205ENST00000432057 ARAP3Q8WWN8 1544 aa28.06■■■□□ 2.08
VRK2-205ENST00000432057 RPRD2Q5VT52 1461 aaKnown RBP28.05■■■□□ 2.08
VRK2-205ENST00000432057 MIER1Q8N108 512 aa28.04■■■□□ 2.08
VRK2-205ENST00000432057 EFCAB2Q5VUJ9 269 aa28■■■□□ 2.07
VRK2-205ENST00000432057 ASXL2Q76L83 1435 aa27.99■■■□□ 2.07
VRK2-205ENST00000432057 UNC13BO14795 1591 aa27.98■■■□□ 2.07
VRK2-205ENST00000432057 TEX14Q8IWB6 1497 aa27.97■■■□□ 2.07
VRK2-205ENST00000432057 NUP155O75694 1391 aa27.97■■■□□ 2.07
VRK2-205ENST00000432057 PKD2Q13563 968 aa27.93■■■□□ 2.06
VRK2-205ENST00000432057 TRAPPC8Q9Y2L5 1435 aa27.93■■■□□ 2.06
VRK2-205ENST00000432057 DUOX2Q9NRD8 1548 aa27.91■■■□□ 2.06
VRK2-205ENST00000432057 L3MBTL2Q969R5 705 aa27.91■■■□□ 2.06
VRK2-205ENST00000432057 FAM135AQ9P2D6 1515 aa27.9■■■□□ 2.06
VRK2-205ENST00000432057 FANCAO15360 1455 aa27.89■■■□□ 2.06
VRK2-205ENST00000432057 HIRIP3Q9BW71 556 aaPredicted RBP27.88■■■□□ 2.05
VRK2-205ENST00000432057 ZFYVE16Q7Z3T8 1539 aa27.87■■■□□ 2.05
VRK2-205ENST00000432057 IQGAP3Q86VI3 1631 aa27.86■■■□□ 2.05
VRK2-205ENST00000432057 RIMBP3CA6NJZ7 1639 aa27.84■■■□□ 2.05
VRK2-205ENST00000432057 RIMBP3BA6NNM3 1639 aa27.84■■■□□ 2.05
VRK2-205ENST00000432057 RIMBP3Q9UFD9 1639 aa27.84■■■□□ 2.05
VRK2-205ENST00000432057 ERBINQ96RT1 1412 aa27.83■■■□□ 2.05
VRK2-205ENST00000432057 INO80Q9ULG1 1556 aaPredicted RBP27.83■■■□□ 2.05
VRK2-205ENST00000432057 NPM1P06748 294 aaKnown RBP eCLIP27.82■■■□□ 2.04
VRK2-205ENST00000432057 MAGI2Q86UL8 1455 aa27.8■■■□□ 2.04
VRK2-205ENST00000432057 ADGRL1O94910 1474 aa27.8■■■□□ 2.04
VRK2-205ENST00000432057 RTEL1-TNFRSF6BF6WH68 1400 aa27.77■■■□□ 2.04
VRK2-205ENST00000432057 ATP7AQ04656 1500 aa27.77■■■□□ 2.04
VRK2-205ENST00000432057 SPAG9O60271 1321 aaKnown RBP27.76■■■□□ 2.04
VRK2-205ENST00000432057 AFAP1Q8N556 730 aa27.75■■■□□ 2.03
VRK2-205ENST00000432057 CFAP74Q9C0B2 1584 aa27.75■■■□□ 2.03
VRK2-205ENST00000432057 NBPF8Q3BBV2 869 aa27.74■■■□□ 2.03
VRK2-205ENST00000432057 DDX10Q13206 875 aaKnown RBP27.73■■■□□ 2.03
VRK2-205ENST00000432057 CYB5RLQ6IPT4 315 aa27.73■■■□□ 2.03
VRK2-205ENST00000432057 SCAPERQ9BY12 1400 aa27.73■■■□□ 2.03
VRK2-205ENST00000432057 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.71■■■□□ 2.039e-6■□□□□ 10.7
VRK2-205ENST00000432057 YTHDC1Q96MU7 727 aaKnown RBP27.7■■■□□ 2.02
VRK2-205ENST00000432057 DEPDC5O75140 1603 aa27.7■■■□□ 2.02
VRK2-205ENST00000432057 HSPA5P11021 654 aaKnown RBP27.68■■■□□ 2.02
VRK2-205ENST00000432057 KIDINS220Q9ULH0 1771 aa27.67■■■□□ 2.02
VRK2-205ENST00000432057 CD109Q6YHK3 1445 aa27.66■■■□□ 2.02
VRK2-205ENST00000432057 CENPBP07199 599 aaPredicted RBP27.66■■■□□ 2.02
VRK2-205ENST00000432057 POLR1AO95602 1720 aaPredicted RBP27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms