RNA–Protein interactions for RNA: ENST00000422508.6

CD109-202, Transcript of CD109 molecule, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CD109, Length 9,221 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD109-202ENST00000422508 CDR1P51861 262 aa11.6□□□□□ -0.55
CD109-202ENST00000422508 ROCK2O75116 1388 aaKnown RBP11.6□□□□□ -0.55
CD109-202ENST00000422508 PMFBP1Q8TBY8 1022 aa11.6□□□□□ -0.55
CD109-202ENST00000422508 HSP90AA2PQ14568 343 aaPredicted RBP11.59□□□□□ -0.55
CD109-202ENST00000422508 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.59□□□□□ -0.55
CD109-202ENST00000422508 KTN1Q86UP2 1357 aaKnown RBP11.59□□□□□ -0.55
CD109-202ENST00000422508 DEKP35659 375 aaKnown RBP11.59□□□□□ -0.55
CD109-202ENST00000422508 ACBD3Q9H3P7 528 aa11.58□□□□□ -0.56
CD109-202ENST00000422508 RWDD1Q9H446 243 aaPredicted RBP11.58□□□□□ -0.56
CD109-202ENST00000422508 ARHGAP35Q9NRY4 1499 aa11.57□□□□□ -0.56
CD109-202ENST00000422508 C14orf37Q86TY3 774 aa11.57□□□□□ -0.56
CD109-202ENST00000422508 NAP1L2Q9ULW6 460 aaPredicted RBP11.57□□□□□ -0.56
CD109-202ENST00000422508 LRRFIP1Q32MZ4 808 aaKnown RBP11.57□□□□□ -0.56
CD109-202ENST00000422508 HOOK1Q9UJC3 728 aaKnown RBP11.57□□□□□ -0.56
CD109-202ENST00000422508 RRP12Q5JTH9 1297 aaKnown RBP11.57□□□□□ -0.56
CD109-202ENST00000422508 MIER1Q8N108 512 aa11.57□□□□□ -0.56
CD109-202ENST00000422508 ST18O60284 1047 aa11.57□□□□□ -0.56
CD109-202ENST00000422508 P3H3Q8IVL6 736 aa11.57□□□□□ -0.56
CD109-202ENST00000422508 TMF1P82094 1093 aa11.56□□□□□ -0.56
CD109-202ENST00000422508 CWC15Q9P013 229 aaKnown RBP11.56□□□□□ -0.56
CD109-202ENST00000422508 TMX4Q9H1E5 349 aaPredicted RBP11.56□□□□□ -0.56
CD109-202ENST00000422508 MAP7D2Q96T17 732 aa11.56□□□□□ -0.56
CD109-202ENST00000422508 KDM2AQ9Y2K7 1162 aa11.56□□□□□ -0.56
CD109-202ENST00000422508 DHX8Q14562 1220 aaKnown RBP11.56□□□□□ -0.56
CD109-202ENST00000422508 SUPT16HQ9Y5B9 1047 aaKnown RBP11.55□□□□□ -0.56
CD109-202ENST00000422508 RDXP35241 583 aaKnown RBP11.54□□□□□ -0.56
CD109-202ENST00000422508 CARD11Q9BXL7 1154 aa11.54□□□□□ -0.56
CD109-202ENST00000422508 MYO6Q9UM54 1294 aa11.54□□□□□ -0.56
CD109-202ENST00000422508 DCTN1Q14203 1278 aa11.54□□□□□ -0.56
CD109-202ENST00000422508 RALBP1Q15311 655 aa11.54□□□□□ -0.56
CD109-202ENST00000422508 AK7Q96M32 723 aa11.53□□□□□ -0.56
CD109-202ENST00000422508 HSP90B1P14625 803 aaKnown RBP11.53□□□□□ -0.56
CD109-202ENST00000422508 BAZ1BQ9UIG0 1483 aaKnown RBP11.52□□□□□ -0.56
CD109-202ENST00000422508 ANKRD20A12PQ8NF67 263 aa11.52□□□□□ -0.56
CD109-202ENST00000422508 SPAG9O60271 1321 aaKnown RBP11.52□□□□□ -0.56
CD109-202ENST00000422508 PLEKHD1A6NEE1 506 aa11.52□□□□□ -0.57
CD109-202ENST00000422508 RGS3P49796 1198 aa11.52□□□□□ -0.57
CD109-202ENST00000422508 WWC1Q8IX03 1113 aa11.52□□□□□ -0.57
CD109-202ENST00000422508 IPO7O95373 1038 aaKnown RBP11.51□□□□□ -0.57
CD109-202ENST00000422508 RTF1Q92541 710 aaKnown RBP11.51□□□□□ -0.57
CD109-202ENST00000422508 A0A0G2JS52 829 aa11.51□□□□□ -0.57
CD109-202ENST00000422508 TNIKQ9UKE5 1360 aa11.51□□□□□ -0.57
CD109-202ENST00000422508 TULP1O00294 542 aaPredicted RBP11.5□□□□□ -0.57
CD109-202ENST00000422508 LMOD3Q0VAK6 560 aa11.5□□□□□ -0.57
CD109-202ENST00000422508 ARGLU1Q9NWB6 273 aaPredicted RBP11.5□□□□□ -0.57
CD109-202ENST00000422508 CAGE1Q8TC20 777 aa11.5□□□□□ -0.57
CD109-202ENST00000422508 GOLGA6L19H0YKK7 550 aa11.49□□□□□ -0.57
CD109-202ENST00000422508 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.49□□□□□ -0.57
CD109-202ENST00000422508 CHMP7Q8WUX9 453 aaPredicted RBP11.49□□□□□ -0.57
CD109-202ENST00000422508 POGKQ9P215 609 aa11.49□□□□□ -0.57
CD109-202ENST00000422508 ROCK1Q13464 1354 aa11.48□□□□□ -0.57
CD109-202ENST00000422508 PDE3BQ13370 1112 aa11.48□□□□□ -0.57
CD109-202ENST00000422508 IRX6P78412 446 aaPredicted RBP11.48□□□□□ -0.57
CD109-202ENST00000422508 FRAT1Q92837 279 aaPredicted RBP11.48□□□□□ -0.57
CD109-202ENST00000422508 CCNB3Q8WWL7 1395 aa11.47□□□□□ -0.57
CD109-202ENST00000422508 CCDC191Q8NCU4 936 aa11.47□□□□□ -0.57
CD109-202ENST00000422508 AAMPQ13685 434 aa11.47□□□□□ -0.57
CD109-202ENST00000422508 IPO9Q96P70 1041 aaKnown RBP11.47□□□□□ -0.57
CD109-202ENST00000422508 PRM3Q9NNZ6 103 aa11.47□□□□□ -0.57
CD109-202ENST00000422508 UACAQ9BZF9 1416 aa11.46□□□□□ -0.57
CD109-202ENST00000422508 ZRSR2Q15696 482 aaKnown RBP11.46□□□□□ -0.57
CD109-202ENST00000422508 TAF3Q5VWG9 929 aa11.46□□□□□ -0.57
CD109-202ENST00000422508 CCDC66A2RUB6 948 aa11.46□□□□□ -0.58
CD109-202ENST00000422508 CCP110O43303 1012 aa11.46□□□□□ -0.58
CD109-202ENST00000422508 PABPN1Q86U42 306 aaKnown RBP eCLIP11.46□□□□□ -0.58
CD109-202ENST00000422508 CHIC2Q9UKJ5 165 aa11.46□□□□□ -0.58
CD109-202ENST00000422508 NGEFQ8N5V2 710 aa11.45□□□□□ -0.58
CD109-202ENST00000422508 RUFY1Q96T51 708 aa11.45□□□□□ -0.58
CD109-202ENST00000422508 ERCC4Q92889 916 aaPredicted RBP11.45□□□□□ -0.58
CD109-202ENST00000422508 CFDP1Q9UEE9 299 aaPredicted RBP11.44□□□□□ -0.58
CD109-202ENST00000422508 SMARCA2P51531 1590 aa11.44□□□□□ -0.58
CD109-202ENST00000422508 TPD52L1Q16890 204 aaPredicted RBP11.44□□□□□ -0.58
CD109-202ENST00000422508 ARID3CA6NKF2 412 aa11.44□□□□□ -0.58
CD109-202ENST00000422508 WRNQ14191 1432 aaPredicted RBP eCLIP11.43□□□□□ -0.58
CD109-202ENST00000422508 CCDC47Q96A33 483 aaKnown RBP11.43□□□□□ -0.58
CD109-202ENST00000422508 RTN4Q9NQC3 1192 aaKnown RBP11.43□□□□□ -0.58
CD109-202ENST00000422508 RASSF8Q8NHQ8 419 aa11.43□□□□□ -0.58
CD109-202ENST00000422508 PRDM2Q13029 1718 aa11.43□□□□□ -0.58
CD109-202ENST00000422508 SETD5Q9C0A6 1442 aa11.43□□□□□ -0.58
CD109-202ENST00000422508 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.42□□□□□ -0.58
CD109-202ENST00000422508 HSP90B2PQ58FF3 399 aa11.42□□□□□ -0.58
CD109-202ENST00000422508 NAT10Q9H0A0 1025 aaKnown RBP11.42□□□□□ -0.58
CD109-202ENST00000422508 FMN1Q68DA7 1419 aa11.42□□□□□ -0.58
CD109-202ENST00000422508 TPRNQ4KMQ1 711 aa11.41□□□□□ -0.58
CD109-202ENST00000422508 ZNF771Q7L3S4 317 aaPredicted RBP11.41□□□□□ -0.58
CD109-202ENST00000422508 TXLNBQ8N3L3 684 aa11.41□□□□□ -0.58
CD109-202ENST00000422508 KIF7Q2M1P5 1343 aa11.41□□□□□ -0.58
CD109-202ENST00000422508 HDGFL2Q7Z4V5 671 aaPredicted RBP11.41□□□□□ -0.58
CD109-202ENST00000422508 NEXNQ0ZGT2 675 aa11.41□□□□□ -0.58
CD109-202ENST00000422508 CCDC173Q0VFZ6 552 aa11.41□□□□□ -0.58
CD109-202ENST00000422508 STK31Q9BXU1 1019 aa11.4□□□□□ -0.58
CD109-202ENST00000422508 RCAN3Q9UKA8 241 aa11.4□□□□□ -0.58
CD109-202ENST00000422508 INCENPQ9NQS7 918 aa11.4□□□□□ -0.58
CD109-202ENST00000422508 ZBTB7CA1YPR0 619 aa11.39□□□□□ -0.59
CD109-202ENST00000422508 RBM19Q9Y4C8 960 aaKnown RBP11.39□□□□□ -0.59
CD109-202ENST00000422508 DIAPH3Q9NSV4 1193 aa11.39□□□□□ -0.59
CD109-202ENST00000422508 CAVIN1Q6NZI2 390 aaKnown RBP11.38□□□□□ -0.59
CD109-202ENST00000422508 MORC1Q86VD1 984 aa11.38□□□□□ -0.59
CD109-202ENST00000422508 REC8O95072 547 aa11.38□□□□□ -0.59
CD109-202ENST00000422508 H3BQV1 296 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms