RNA–Protein interactions for RNA: ENST00000420820.6

CROCCP3-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

BASIC

Gene CROCCP3, Length 1,947 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-202ENST00000420820 KIF14Q15058 1648 aa27.21■■□□□ 1.95
CROCCP3-202ENST00000420820 TONSLQ96HA7 1378 aa27.2■■□□□ 1.95
CROCCP3-202ENST00000420820 GPATCH8Q9UKJ3 1502 aaKnown RBP27.19■■□□□ 1.94
CROCCP3-202ENST00000420820 YTHDC1Q96MU7 727 aaKnown RBP27.18■■□□□ 1.94
CROCCP3-202ENST00000420820 ZNF644Q9H582 1327 aaPredicted RBP27.16■■□□□ 1.94
CROCCP3-202ENST00000420820 CAMSAP2Q08AD1 1489 aa27.15■■□□□ 1.94
CROCCP3-202ENST00000420820 ATP10BO94823 1461 aa27.13■■□□□ 1.93
CROCCP3-202ENST00000420820 GTF3C3Q9Y5Q9 886 aa27.12■■□□□ 1.93
CROCCP3-202ENST00000420820 CHD1O14646 1710 aa27.12■■□□□ 1.93
CROCCP3-202ENST00000420820 CROCC2H7BZ55 1655 aa27.11■■□□□ 1.93
CROCCP3-202ENST00000420820 ADGBQ8N7X0 1667 aa27.1■■□□□ 1.93
CROCCP3-202ENST00000420820 ABCC10Q5T3U5 1492 aa27.09■■□□□ 1.93
CROCCP3-202ENST00000420820 MPHOSPH9Q99550 1183 aa27.09■■□□□ 1.93
CROCCP3-202ENST00000420820 CDC42BPAQ5VT25 1732 aa27.09■■□□□ 1.93
CROCCP3-202ENST00000420820 CFDP1Q9UEE9 299 aaPredicted RBP27.07■■□□□ 1.92
CROCCP3-202ENST00000420820 ADGRL2O95490 1459 aa27.07■■□□□ 1.92
CROCCP3-202ENST00000420820 SHROOM2Q13796 1616 aa27.07■■□□□ 1.92
CROCCP3-202ENST00000420820 TRIM52Q96A61 297 aa27.06■■□□□ 1.92
CROCCP3-202ENST00000420820 NCOA1Q15788 1441 aa27.02■■□□□ 1.92
CROCCP3-202ENST00000420820 PLEKHD1A6NEE1 506 aa27.02■■□□□ 1.92
CROCCP3-202ENST00000420820 PTPRGP23470 1445 aa27.01■■□□□ 1.91
CROCCP3-202ENST00000420820 ANKRD30BQ9BXX2 1392 aa26.98■■□□□ 1.91
CROCCP3-202ENST00000420820 DDX10Q13206 875 aaKnown RBP26.95■■□□□ 1.9
CROCCP3-202ENST00000420820 SHANK2Q9UPX8 1470 aa26.95■■□□□ 1.9
CROCCP3-202ENST00000420820 PZPP20742 1482 aa26.93■■□□□ 1.9
CROCCP3-202ENST00000420820 RPRD2Q5VT52 1461 aaKnown RBP26.93■■□□□ 1.9
CROCCP3-202ENST00000420820 HIRIP3Q9BW71 556 aaPredicted RBP26.9■■□□□ 1.9
CROCCP3-202ENST00000420820 ANKRD30AQ9BXX3 1397 aa26.89■■□□□ 1.89
CROCCP3-202ENST00000420820 ARHGEF5Q12774 1597 aa26.88■■□□□ 1.89
CROCCP3-202ENST00000420820 ZNF777Q9ULD5 760 aaPredicted RBP26.88■■□□□ 1.89
CROCCP3-202ENST00000420820 FOXD1Q16676 465 aa26.86■■□□□ 1.89
CROCCP3-202ENST00000420820 TEX14Q8IWB6 1497 aa26.86■■□□□ 1.89
CROCCP3-202ENST00000420820 CDC42BPBQ9Y5S2 1711 aa26.85■■□□□ 1.89
CROCCP3-202ENST00000420820 PREX2Q70Z35 1606 aa26.85■■□□□ 1.89
CROCCP3-202ENST00000420820 L3MBTL2Q969R5 705 aa26.84■■□□□ 1.89
CROCCP3-202ENST00000420820 SLC4A1APQ9BWU0 796 aaKnown RBP26.84■■□□□ 1.89
CROCCP3-202ENST00000420820 C9orf84Q5VXU9 1444 aa26.82■■□□□ 1.88
CROCCP3-202ENST00000420820 ERCC6L2Q5T890 1561 aa26.81■■□□□ 1.88
CROCCP3-202ENST00000420820 MBD5Q9P267 1494 aa26.81■■□□□ 1.88
CROCCP3-202ENST00000420820 ANKRD50Q9ULJ7 1429 aa26.81■■□□□ 1.88
CROCCP3-202ENST00000420820 ABCC2Q92887 1545 aa26.8■■□□□ 1.88
CROCCP3-202ENST00000420820 SAMD9LQ8IVG5 1584 aa26.79■■□□□ 1.88
CROCCP3-202ENST00000420820 CLASP1Q7Z460 1538 aa26.79■■□□□ 1.88
CROCCP3-202ENST00000420820 KIAA1107Q9UPP5 1409 aa26.77■■□□□ 1.88
CROCCP3-202ENST00000420820 KCNH8Q96L42 1107 aa26.77■■□□□ 1.88
CROCCP3-202ENST00000420820 KDM5DQ9BY66 1539 aa26.77■■□□□ 1.88
CROCCP3-202ENST00000420820 CCER2I3L3R5 266 aa26.75■■□□□ 1.87
CROCCP3-202ENST00000420820 HSPA5P11021 654 aaKnown RBP26.73■■□□□ 1.87
CROCCP3-202ENST00000420820 TTC37Q6PGP7 1564 aa26.72■■□□□ 1.87
CROCCP3-202ENST00000420820 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.71■■□□□ 1.87
CROCCP3-202ENST00000420820 CCDC141Q6ZP82 1450 aa26.71■■□□□ 1.87
CROCCP3-202ENST00000420820 TSPY4P0CV99 314 aa26.69■■□□□ 1.86
CROCCP3-202ENST00000420820 TSPY10P0CW01 314 aa26.69■■□□□ 1.86
CROCCP3-202ENST00000420820 EIF4G2P78344 907 aaKnown RBP eCLIP26.69■■□□□ 1.86
CROCCP3-202ENST00000420820 NBPF8Q3BBV2 869 aa26.69■■□□□ 1.86
CROCCP3-202ENST00000420820 ANP32CO43423 234 aa26.68■■□□□ 1.86
CROCCP3-202ENST00000420820 RSPH4AQ5TD94 716 aa26.68■■□□□ 1.86
CROCCP3-202ENST00000420820 MAST1Q9Y2H9 1570 aa26.67■■□□□ 1.86
CROCCP3-202ENST00000420820 HNRNPMP52272 730 aaKnown RBP eCLIP26.67■■□□□ 1.86
CROCCP3-202ENST00000420820 OSCARQ8IYS5 282 aa26.67■■□□□ 1.86
CROCCP3-202ENST00000420820 UHRF1BP1LA0JNW5 1464 aa26.67■■□□□ 1.86
CROCCP3-202ENST00000420820 KIF15Q9NS87 1388 aa26.66■■□□□ 1.86
CROCCP3-202ENST00000420820 WASHC2AQ641Q2 1341 aa26.66■■□□□ 1.86
CROCCP3-202ENST00000420820 MYO5CQ9NQX4 1742 aa26.66■■□□□ 1.86
CROCCP3-202ENST00000420820 PKD2Q13563 968 aa26.65■■□□□ 1.86
CROCCP3-202ENST00000420820 SPATA31E1Q6ZUB1 1445 aa26.64■■□□□ 1.85
CROCCP3-202ENST00000420820 ZCCHC11Q5TAX3 1644 aaKnown RBP26.62■■□□□ 1.85
CROCCP3-202ENST00000420820 NUP155O75694 1391 aa26.61■■□□□ 1.85
CROCCP3-202ENST00000420820 SYCP2Q9BX26 1530 aa26.61■■□□□ 1.85
CROCCP3-202ENST00000420820 POLR1AO95602 1720 aaPredicted RBP26.61■■□□□ 1.85
CROCCP3-202ENST00000420820 ARHGAP5Q13017 1502 aa26.6■■□□□ 1.85
CROCCP3-202ENST00000420820 PLEKHH2Q8IVE3 1493 aa26.58■■□□□ 1.85
CROCCP3-202ENST00000420820 PLXNC1O60486 1568 aa26.56■■□□□ 1.84
CROCCP3-202ENST00000420820 CCDC7Q96M83 1385 aa26.53■■□□□ 1.84
CROCCP3-202ENST00000420820 UNC13BO14795 1591 aa26.53■■□□□ 1.84
CROCCP3-202ENST00000420820 UHRF1BP1Q6BDS2 1440 aa26.53■■□□□ 1.84
CROCCP3-202ENST00000420820 CNTLNQ9NXG0 1405 aa26.53■■□□□ 1.84
CROCCP3-202ENST00000420820 ARHGEF12Q9NZN5 1544 aa26.53■■□□□ 1.84
CROCCP3-202ENST00000420820 C11orf95C9JLR9 678 aaPredicted RBP26.51■■□□□ 1.83
CROCCP3-202ENST00000420820 FAM135AQ9P2D6 1515 aa26.51■■□□□ 1.83
CROCCP3-202ENST00000420820 PLCH2O75038 1416 aa26.51■■□□□ 1.83
CROCCP3-202ENST00000420820 PELP1Q8IZL8 1130 aaKnown RBP26.47■■□□□ 1.83
CROCCP3-202ENST00000420820 RALGAPBQ86X10 1494 aa26.43■■□□□ 1.82
CROCCP3-202ENST00000420820 KDM5CP41229 1560 aa26.43■■□□□ 1.82
CROCCP3-202ENST00000420820 ABCC1P33527 1531 aa26.43■■□□□ 1.82
CROCCP3-202ENST00000420820 ARAP3Q8WWN8 1544 aa26.43■■□□□ 1.82
CROCCP3-202ENST00000420820 IQGAP3Q86VI3 1631 aa26.42■■□□□ 1.82
CROCCP3-202ENST00000420820 DUOX2Q9NRD8 1548 aa26.41■■□□□ 1.82
CROCCP3-202ENST00000420820 MAGI2Q86UL8 1455 aa26.4■■□□□ 1.82
CROCCP3-202ENST00000420820 KIF7Q2M1P5 1343 aa26.4■■□□□ 1.82
CROCCP3-202ENST00000420820 SUPT16HQ9Y5B9 1047 aaKnown RBP26.39■■□□□ 1.81
CROCCP3-202ENST00000420820 BCORL1Q5H9F3 1711 aa26.38■■□□□ 1.81
CROCCP3-202ENST00000420820 EFCAB2Q5VUJ9 269 aa26.37■■□□□ 1.81
CROCCP3-202ENST00000420820 USP47Q96K76 1375 aa26.37■■□□□ 1.81
CROCCP3-202ENST00000420820 ERBINQ96RT1 1412 aa26.37■■□□□ 1.81
CROCCP3-202ENST00000420820 PLA2R1Q13018 1463 aa26.34■■□□□ 1.81
CROCCP3-202ENST00000420820 TRAPPC8Q9Y2L5 1435 aa26.31■■□□□ 1.8
CROCCP3-202ENST00000420820 ARID4BQ4LE39 1312 aaPredicted RBP26.31■■□□□ 1.8
CROCCP3-202ENST00000420820 ATP10AO60312 1499 aa26.3■■□□□ 1.8
CROCCP3-202ENST00000420820 PRKRIP1Q9H875 184 aaPredicted RBP26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms