RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 CERKQ8TCT0 537 aa16.69■□□□□ 0.26
MDC1-202ENST00000416571 ATP1B4Q9UN42 357 aaPredicted RBP16.69■□□□□ 0.26
MDC1-202ENST00000416571 YEATS2Q9ULM3 1422 aa16.69■□□□□ 0.26
MDC1-202ENST00000416571 MLECQ14165 292 aa16.68■□□□□ 0.26
MDC1-202ENST00000416571 SCAPERQ9BY12 1400 aa16.68■□□□□ 0.26
MDC1-202ENST00000416571 MYO5CQ9NQX4 1742 aa16.67■□□□□ 0.26
MDC1-202ENST00000416571 PLCH2O75038 1416 aa16.67■□□□□ 0.26
MDC1-202ENST00000416571 SIGLEC1Q9BZZ2 1709 aa16.67■□□□□ 0.26
MDC1-202ENST00000416571 HSPA2P54652 639 aa16.66■□□□□ 0.26
MDC1-202ENST00000416571 FMN1Q68DA7 1419 aa16.65■□□□□ 0.26
MDC1-202ENST00000416571 UBTFP17480 764 aaKnown RBP16.65■□□□□ 0.26
MDC1-202ENST00000416571 EHMT2Q96KQ7 1210 aa16.64■□□□□ 0.25
MDC1-202ENST00000416571 CDK11AQ9UQ88 783 aaPredicted RBP16.64■□□□□ 0.25
MDC1-202ENST00000416571 ATP10AO60312 1499 aa16.62■□□□□ 0.25
MDC1-202ENST00000416571 EFCAB2Q5VUJ9 269 aa16.62■□□□□ 0.25
MDC1-202ENST00000416571 KIF14Q15058 1648 aa16.62■□□□□ 0.25
MDC1-202ENST00000416571 C9orf84Q5VXU9 1444 aa16.61■□□□□ 0.25
MDC1-202ENST00000416571 ARHGEF12Q9NZN5 1544 aa16.59■□□□□ 0.25
MDC1-202ENST00000416571 PREX1Q8TCU6 1659 aa16.59■□□□□ 0.25
MDC1-202ENST00000416571 MYT1LQ9UL68 1186 aa16.58■□□□□ 0.24
MDC1-202ENST00000416571 CLIP1P30622 1438 aa16.58■□□□□ 0.24
MDC1-202ENST00000416571 ZNF518AQ6AHZ1 1483 aa16.58■□□□□ 0.24
MDC1-202ENST00000416571 ARHGAP35Q9NRY4 1499 aa16.58■□□□□ 0.24
MDC1-202ENST00000416571 ARHGAP5Q13017 1502 aa16.58■□□□□ 0.24
MDC1-202ENST00000416571 TROQ12816 1431 aaPredicted RBP16.56■□□□□ 0.24
MDC1-202ENST00000416571 KDM5CP41229 1560 aa16.53■□□□□ 0.24
MDC1-202ENST00000416571 CEBPAP49715 358 aaPredicted RBP16.52■□□□□ 0.24
MDC1-202ENST00000416571 LRRIQ1Q96JM4 1722 aa16.52■□□□□ 0.24
MDC1-202ENST00000416571 AFAP1Q8N556 730 aa16.51■□□□□ 0.23
MDC1-202ENST00000416571 DIP2CQ9Y2E4 1556 aa16.51■□□□□ 0.23
MDC1-202ENST00000416571 UHRF1BP1Q6BDS2 1440 aa16.5■□□□□ 0.23
MDC1-202ENST00000416571 CDC42BPBQ9Y5S2 1711 aa16.5■□□□□ 0.23
MDC1-202ENST00000416571 DMRT2Q9Y5R5 561 aa16.49■□□□□ 0.23
MDC1-202ENST00000416571 REREQ9P2R6 1566 aa16.48■□□□□ 0.23
MDC1-202ENST00000416571 ESF1Q9H501 851 aaKnown RBP16.48■□□□□ 0.23
MDC1-202ENST00000416571 PREX2Q70Z35 1606 aa16.48■□□□□ 0.23
MDC1-202ENST00000416571 ABCA6Q8N139 1617 aa16.48■□□□□ 0.23
MDC1-202ENST00000416571 CCDC18Q5T9S5 1454 aa16.47■□□□□ 0.23
MDC1-202ENST00000416571 SETD1BQ9UPS6 1966 aaKnown RBP16.46■□□□□ 0.23
MDC1-202ENST00000416571 MLH3Q9UHC1 1453 aa16.46■□□□□ 0.23
MDC1-202ENST00000416571 ABCC1P33527 1531 aa16.45■□□□□ 0.22
MDC1-202ENST00000416571 C3P01024 1663 aa16.45■□□□□ 0.22
MDC1-202ENST00000416571 ITSN2Q9NZM3 1697 aa16.45■□□□□ 0.22
MDC1-202ENST00000416571 STRCQ7RTU9 1775 aa16.44■□□□□ 0.22
MDC1-202ENST00000416571 CASKIN1Q8WXD9 1431 aa16.43■□□□□ 0.22
MDC1-202ENST00000416571 AGLP35573 1532 aa16.42■□□□□ 0.22
MDC1-202ENST00000416571 CHIC1Q5VXU3 224 aa16.42■□□□□ 0.22
MDC1-202ENST00000416571 TRAPPC8Q9Y2L5 1435 aa16.42■□□□□ 0.22
MDC1-202ENST00000416571 CDC42BPAQ5VT25 1732 aa16.41■□□□□ 0.22
MDC1-202ENST00000416571 KIDINS220Q9ULH0 1771 aa16.39■□□□□ 0.21
MDC1-202ENST00000416571 CNTLNQ9NXG0 1405 aa16.38■□□□□ 0.21
MDC1-202ENST00000416571 ZNF777Q9ULD5 760 aaPredicted RBP16.37■□□□□ 0.21
MDC1-202ENST00000416571 PTPRTO14522 1441 aa16.36■□□□□ 0.21
MDC1-202ENST00000416571 FYCO1Q9BQS8 1478 aa16.36■□□□□ 0.21
MDC1-202ENST00000416571 SAMD9LQ8IVG5 1584 aa16.34■□□□□ 0.21
MDC1-202ENST00000416571 SYCP2Q9BX26 1530 aa16.34■□□□□ 0.21
MDC1-202ENST00000416571 MROH2AA6NES4 1674 aa16.34■□□□□ 0.21
MDC1-202ENST00000416571 SUPT6HQ7KZ85 1726 aaKnown RBP16.33■□□□□ 0.2
MDC1-202ENST00000416571 SPAG9O60271 1321 aaKnown RBP16.31■□□□□ 0.2
MDC1-202ENST00000416571 NPATQ14207 1427 aa16.3■□□□□ 0.2
MDC1-202ENST00000416571 NCOA1Q15788 1441 aa16.3■□□□□ 0.2
MDC1-202ENST00000416571 ATP7AQ04656 1500 aa16.29■□□□□ 0.2
MDC1-202ENST00000416571 GPATCH8Q9UKJ3 1502 aaKnown RBP16.29■□□□□ 0.2
MDC1-202ENST00000416571 HNRNPMP52272 730 aaKnown RBP eCLIP16.29■□□□□ 0.2
MDC1-202ENST00000416571 CAMSAP1Q5T5Y3 1602 aa16.29■□□□□ 0.2
MDC1-202ENST00000416571 PLEKHH2Q8IVE3 1493 aa16.29■□□□□ 0.2
MDC1-202ENST00000416571 CLTCQ00610 1675 aaKnown RBP16.27■□□□□ 0.2
MDC1-202ENST00000416571 ZMYM3Q14202 1370 aa16.27■□□□□ 0.2
MDC1-202ENST00000416571 LTBP4Q8N2S1 1624 aa16.27■□□□□ 0.2
MDC1-202ENST00000416571 CFDP1Q9UEE9 299 aaPredicted RBP16.27■□□□□ 0.2
MDC1-202ENST00000416571 CCNB3Q8WWL7 1395 aa16.26■□□□□ 0.19
MDC1-202ENST00000416571 INO80Q9ULG1 1556 aaPredicted RBP16.26■□□□□ 0.19
MDC1-202ENST00000416571 IQSEC2Q5JU85 1478 aa16.26■□□□□ 0.19
MDC1-202ENST00000416571 A2MP01023 1474 aa16.25■□□□□ 0.19
MDC1-202ENST00000416571 KIAA1107Q9UPP5 1409 aa16.25■□□□□ 0.19
MDC1-202ENST00000416571 MYO3AQ8NEV4 1616 aa16.24■□□□□ 0.19
MDC1-202ENST00000416571 PLXNC1O60486 1568 aa16.24■□□□□ 0.19
MDC1-202ENST00000416571 MTUS2Q5JR59 1369 aa16.24■□□□□ 0.19
MDC1-202ENST00000416571 ZNF142P52746 1687 aaPredicted RBP16.23■□□□□ 0.19
MDC1-202ENST00000416571 ADGBQ8N7X0 1667 aa16.23■□□□□ 0.19
MDC1-202ENST00000416571 GGT6Q6P531 493 aa16.22■□□□□ 0.19
MDC1-202ENST00000416571 CEP170BQ9Y4F5 1589 aaPredicted RBP16.21■□□□□ 0.19
MDC1-202ENST00000416571 NCKAP5LQ9HCH0 1330 aa16.2■□□□□ 0.18
MDC1-202ENST00000416571 PLA2R1Q13018 1463 aa16.2■□□□□ 0.18
MDC1-202ENST00000416571 PTPRKQ15262 1439 aa16.19■□□□□ 0.18
MDC1-202ENST00000416571 PKD2Q13563 968 aa16.18■□□□□ 0.18
MDC1-202ENST00000416571 PPP6R1Q9UPN7 881 aa16.17■□□□□ 0.18
MDC1-202ENST00000416571 EHBP1L1Q8N3D4 1523 aa16.17■□□□□ 0.18
MDC1-202ENST00000416571 TIAM1Q13009 1591 aa16.17■□□□□ 0.18
MDC1-202ENST00000416571 ZNF335Q9H4Z2 1342 aaPredicted RBP16.17■□□□□ 0.18
MDC1-202ENST00000416571 UBAP1LF5GYI3 381 aa16.15■□□□□ 0.18
MDC1-202ENST00000416571 TCOF1Q13428 1488 aaKnown RBP16.15■□□□□ 0.18
MDC1-202ENST00000416571 MED1Q15648 1581 aaPredicted RBP16.14■□□□□ 0.17
MDC1-202ENST00000416571 ZNF644Q9H582 1327 aaPredicted RBP16.14■□□□□ 0.17
MDC1-202ENST00000416571 RTEL1-TNFRSF6BF6WH68 1400 aa16.12■□□□□ 0.17
MDC1-202ENST00000416571 A2ML1A8K2U0 1454 aa16.12■□□□□ 0.17
MDC1-202ENST00000416571 MBD5Q9P267 1494 aa16.11■□□□□ 0.17
MDC1-202ENST00000416571 DNMT1P26358 1616 aaKnown RBP16.11■□□□□ 0.17
MDC1-202ENST00000416571 CEP162Q5TB80 1403 aa16.11■□□□□ 0.17
MDC1-202ENST00000416571 POLR1AO95602 1720 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms