RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 DAPK1P53355 1430 aa18.68■□□□□ 0.58
LITAF-203ENST00000413364 ATP10BO94823 1461 aa18.68■□□□□ 0.58
LITAF-203ENST00000413364 DNMT1P26358 1616 aaKnown RBP18.68■□□□□ 0.58
LITAF-203ENST00000413364 SHROOM2Q13796 1616 aa18.68■□□□□ 0.58
LITAF-203ENST00000413364 ITSN2Q9NZM3 1697 aa18.67■□□□□ 0.58
LITAF-203ENST00000413364 KIF14Q15058 1648 aa18.67■□□□□ 0.58
LITAF-203ENST00000413364 ROCK1Q13464 1354 aa18.66■□□□□ 0.58
LITAF-203ENST00000413364 ABCC5O15440 1437 aa18.66■□□□□ 0.58
LITAF-203ENST00000413364 GPATCH8Q9UKJ3 1502 aaKnown RBP18.65■□□□□ 0.58
LITAF-203ENST00000413364 ZNF644Q9H582 1327 aaPredicted RBP18.64■□□□□ 0.58
LITAF-203ENST00000413364 PLEKHD1A6NEE1 506 aa18.64■□□□□ 0.57
LITAF-203ENST00000413364 CFDP1Q9UEE9 299 aaPredicted RBP18.62■□□□□ 0.57
LITAF-203ENST00000413364 CAMSAP2Q08AD1 1489 aa18.62■□□□□ 0.57
LITAF-203ENST00000413364 KDM6BO15054 1643 aa18.61■□□□□ 0.57
LITAF-203ENST00000413364 ABCC10Q5T3U5 1492 aa18.6■□□□□ 0.57
LITAF-203ENST00000413364 MIER1Q8N108 512 aa18.56■□□□□ 0.56
LITAF-203ENST00000413364 PPP1R15AO75807 674 aaPredicted RBP18.56■□□□□ 0.56
LITAF-203ENST00000413364 CLASP1Q7Z460 1538 aa18.55■□□□□ 0.56
LITAF-203ENST00000413364 CDC42BPAQ5VT25 1732 aa18.55■□□□□ 0.56
LITAF-203ENST00000413364 TRIM52Q96A61 297 aa18.54■□□□□ 0.56
LITAF-203ENST00000413364 DENND4BO75064 1496 aaPredicted RBP18.54■□□□□ 0.56
LITAF-203ENST00000413364 TONSLQ96HA7 1378 aa18.54■□□□□ 0.56
LITAF-203ENST00000413364 ERCC6L2Q5T890 1561 aa18.53■□□□□ 0.56
LITAF-203ENST00000413364 CROCC2H7BZ55 1655 aa18.52■□□□□ 0.56
LITAF-203ENST00000413364 ZNF777Q9ULD5 760 aaPredicted RBP18.52■□□□□ 0.56
LITAF-203ENST00000413364 ADGRL2O95490 1459 aa18.52■□□□□ 0.55
LITAF-203ENST00000413364 ADGBQ8N7X0 1667 aa18.51■□□□□ 0.55
LITAF-203ENST00000413364 MPHOSPH9Q99550 1183 aa18.51■□□□□ 0.55
LITAF-203ENST00000413364 NCOA1Q15788 1441 aa18.5■□□□□ 0.55
LITAF-203ENST00000413364 ABCC2Q92887 1545 aa18.49■□□□□ 0.55
LITAF-203ENST00000413364 SHANK2Q9UPX8 1470 aa18.47■□□□□ 0.55
LITAF-203ENST00000413364 ANKRD30AQ9BXX3 1397 aa18.46■□□□□ 0.55
LITAF-203ENST00000413364 KDM5BQ9UGL1 1544 aa18.44■□□□□ 0.54
LITAF-203ENST00000413364 PREX2Q70Z35 1606 aa18.43■□□□□ 0.54
LITAF-203ENST00000413364 ARHGEF5Q12774 1597 aa18.42■□□□□ 0.54
LITAF-203ENST00000413364 UHRF1BP1LA0JNW5 1464 aa18.42■□□□□ 0.54
LITAF-203ENST00000413364 C9orf84Q5VXU9 1444 aa18.41■□□□□ 0.54
LITAF-203ENST00000413364 ANKRD30BQ9BXX2 1392 aa18.4■□□□□ 0.54
LITAF-203ENST00000413364 CDC42BPBQ9Y5S2 1711 aa18.4■□□□□ 0.54
LITAF-203ENST00000413364 MBD5Q9P267 1494 aa18.39■□□□□ 0.54
LITAF-203ENST00000413364 PZPP20742 1482 aa18.39■□□□□ 0.53
LITAF-203ENST00000413364 SAMD9LQ8IVG5 1584 aa18.39■□□□□ 0.53
LITAF-203ENST00000413364 SLC4A1APQ9BWU0 796 aaKnown RBP18.38■□□□□ 0.53
LITAF-203ENST00000413364 TTC37Q6PGP7 1564 aa18.38■□□□□ 0.53
LITAF-203ENST00000413364 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.38■□□□□ 0.53
LITAF-203ENST00000413364 ANKRD50Q9ULJ7 1429 aa18.37■□□□□ 0.53
LITAF-203ENST00000413364 TSPY4P0CV99 314 aa18.37■□□□□ 0.53
LITAF-203ENST00000413364 TSPY10P0CW01 314 aa18.37■□□□□ 0.53
LITAF-203ENST00000413364 FOXD1Q16676 465 aa18.37■□□□□ 0.53
LITAF-203ENST00000413364 CCDC141Q6ZP82 1450 aa18.36■□□□□ 0.53
LITAF-203ENST00000413364 HNRNPMP52272 730 aaKnown RBP eCLIP18.35■□□□□ 0.531e-6■■■□□ 15.6
LITAF-203ENST00000413364 ZCCHC11Q5TAX3 1644 aaKnown RBP18.35■□□□□ 0.53
LITAF-203ENST00000413364 TSHZ2Q9NRE2 1034 aa18.35■□□□□ 0.53
LITAF-203ENST00000413364 RPRD2Q5VT52 1461 aaKnown RBP18.35■□□□□ 0.53
LITAF-203ENST00000413364 RSPH4AQ5TD94 716 aa18.34■□□□□ 0.53
LITAF-203ENST00000413364 ARHGAP5Q13017 1502 aa18.33■□□□□ 0.52
LITAF-203ENST00000413364 MYO5CQ9NQX4 1742 aa18.32■□□□□ 0.52
LITAF-203ENST00000413364 YTHDC1Q96MU7 727 aaKnown RBP18.31■□□□□ 0.52
LITAF-203ENST00000413364 KIF15Q9NS87 1388 aa18.31■□□□□ 0.52
LITAF-203ENST00000413364 KIAA1107Q9UPP5 1409 aa18.31■□□□□ 0.52
LITAF-203ENST00000413364 PLEKHH2Q8IVE3 1493 aa18.3■□□□□ 0.52
LITAF-203ENST00000413364 L3MBTL2Q969R5 705 aa18.3■□□□□ 0.52
LITAF-203ENST00000413364 SYCP2Q9BX26 1530 aa18.29■□□□□ 0.52
LITAF-203ENST00000413364 KDM5DQ9BY66 1539 aa18.29■□□□□ 0.52
LITAF-203ENST00000413364 MAST1Q9Y2H9 1570 aa18.28■□□□□ 0.52
LITAF-203ENST00000413364 TEX14Q8IWB6 1497 aa18.28■□□□□ 0.52
LITAF-203ENST00000413364 KCNH8Q96L42 1107 aa18.28■□□□□ 0.52
LITAF-203ENST00000413364 HIRIP3Q9BW71 556 aaPredicted RBP18.28■□□□□ 0.52
LITAF-203ENST00000413364 DDX10Q13206 875 aaKnown RBP18.27■□□□□ 0.52
LITAF-203ENST00000413364 PLCH2O75038 1416 aa18.26■□□□□ 0.51
LITAF-203ENST00000413364 NUP155O75694 1391 aa18.26■□□□□ 0.51
LITAF-203ENST00000413364 PKD2Q13563 968 aa18.25■□□□□ 0.51
LITAF-203ENST00000413364 SLC24A1O60721 1099 aa18.23■□□□□ 0.51
LITAF-203ENST00000413364 EFCAB2Q5VUJ9 269 aa18.21■□□□□ 0.51
LITAF-203ENST00000413364 PLXNC1O60486 1568 aa18.21■□□□□ 0.51
LITAF-203ENST00000413364 ARHGEF12Q9NZN5 1544 aa18.2■□□□□ 0.5
LITAF-203ENST00000413364 SUPT16HQ9Y5B9 1047 aaKnown RBP18.19■□□□□ 0.5
LITAF-203ENST00000413364 ARAP3Q8WWN8 1544 aa18.19■□□□□ 0.5
LITAF-203ENST00000413364 HSPA5P11021 654 aaKnown RBP18.19■□□□□ 0.5
LITAF-203ENST00000413364 WDR7Q9Y4E6 1490 aa18.18■□□□□ 0.5
LITAF-203ENST00000413364 ABCC1P33527 1531 aa18.18■□□□□ 0.5
LITAF-203ENST00000413364 EIF4G2P78344 907 aaKnown RBP eCLIP18.18■□□□□ 0.5
LITAF-203ENST00000413364 NBPF8Q3BBV2 869 aa18.18■□□□□ 0.5
LITAF-203ENST00000413364 MYT1LQ9UL68 1186 aa18.18■□□□□ 0.5
LITAF-203ENST00000413364 OSCARQ8IYS5 282 aa18.16■□□□□ 0.5
LITAF-203ENST00000413364 FAM135AQ9P2D6 1515 aa18.15■□□□□ 0.5
LITAF-203ENST00000413364 UNC13BO14795 1591 aa18.15■□□□□ 0.5
LITAF-203ENST00000413364 DUOX2Q9NRD8 1548 aa18.14■□□□□ 0.49
LITAF-203ENST00000413364 UBE2Q2Q8WVN8 375 aa18.12■□□□□ 0.49
LITAF-203ENST00000413364 TRAPPC8Q9Y2L5 1435 aa18.11■□□□□ 0.49
LITAF-203ENST00000413364 ERBINQ96RT1 1412 aa18.11■□□□□ 0.49
LITAF-203ENST00000413364 ABCA9Q8IUA7 1624 aa18.1■□□□□ 0.49
LITAF-203ENST00000413364 ANP32CO43423 234 aa18.09■□□□□ 0.49
LITAF-203ENST00000413364 WASHC2AQ641Q2 1341 aa18.09■□□□□ 0.49
LITAF-203ENST00000413364 ASXL2Q76L83 1435 aa18.08■□□□□ 0.49
LITAF-203ENST00000413364 IQGAP3Q86VI3 1631 aa18.08■□□□□ 0.48
LITAF-203ENST00000413364 SPATA31E1Q6ZUB1 1445 aa18.08■□□□□ 0.48
LITAF-203ENST00000413364 RTEL1-TNFRSF6BF6WH68 1400 aa18.07■□□□□ 0.48
LITAF-203ENST00000413364 UHRF1BP1Q6BDS2 1440 aa18.07■□□□□ 0.48
LITAF-203ENST00000413364 MAGI2Q86UL8 1455 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms