RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 ANKRD30BQ9BXX2 1392 aa24.22■■□□□ 1.47
SDCBP-202ENST00000413219 PDS5BQ9NTI5 1447 aa24.21■■□□□ 1.47
SDCBP-202ENST00000413219 IQGAP2Q13576 1575 aa24.21■■□□□ 1.47
SDCBP-202ENST00000413219 TEX14Q8IWB6 1497 aa24.2■■□□□ 1.47
SDCBP-202ENST00000413219 CCDC184Q52MB2 194 aa24.2■■□□□ 1.47
SDCBP-202ENST00000413219 WDR62O43379 1518 aa24.2■■□□□ 1.46
SDCBP-202ENST00000413219 TARBP1Q13395 1621 aaKnown RBP24.2■■□□□ 1.46
SDCBP-202ENST00000413219 C11orf95C9JLR9 678 aaPredicted RBP24.19■■□□□ 1.46
SDCBP-202ENST00000413219 SPATA31E1Q6ZUB1 1445 aa24.18■■□□□ 1.46
SDCBP-202ENST00000413219 MRS2Q9HD23 443 aa24.17■■□□□ 1.46
SDCBP-202ENST00000413219 CDK13Q14004 1512 aaKnown RBP24.16■■□□□ 1.46
SDCBP-202ENST00000413219 DAPK1P53355 1430 aa24.15■■□□□ 1.46
SDCBP-202ENST00000413219 ERICH6Q7L0X2 663 aa24.15■■□□□ 1.46
SDCBP-202ENST00000413219 DNMT1P26358 1616 aaKnown RBP24.14■■□□□ 1.46
SDCBP-202ENST00000413219 PBRM1Q86U86 1689 aa24.12■■□□□ 1.45
SDCBP-202ENST00000413219 NBPF8Q3BBV2 869 aa24.12■■□□□ 1.45
SDCBP-202ENST00000413219 FAM9BQ8IZU0 186 aa24.12■■□□□ 1.45
SDCBP-202ENST00000413219 KIF7Q2M1P5 1343 aa24.11■■□□□ 1.45
SDCBP-202ENST00000413219 MYT1LQ9UL68 1186 aa24.11■■□□□ 1.45
SDCBP-202ENST00000413219 ADAMTS12P58397 1594 aa24.09■■□□□ 1.45
SDCBP-202ENST00000413219 ABCC5O15440 1437 aa24.09■■□□□ 1.45
SDCBP-202ENST00000413219 FOXD1Q16676 465 aa24.07■■□□□ 1.44
SDCBP-202ENST00000413219 SMG6Q86US8 1419 aaKnown RBP24.06■■□□□ 1.44
SDCBP-202ENST00000413219 B4GALNT3Q6L9W6 998 aa24.01■■□□□ 1.43
SDCBP-202ENST00000413219 MBD5Q9P267 1494 aa24.01■■□□□ 1.43
SDCBP-202ENST00000413219 SLC4A1APQ9BWU0 796 aaKnown RBP24.01■■□□□ 1.43
SDCBP-202ENST00000413219 DHX29Q7Z478 1369 aaKnown RBP24■■□□□ 1.43
SDCBP-202ENST00000413219 ARID4BQ4LE39 1312 aaPredicted RBP23.99■■□□□ 1.43
SDCBP-202ENST00000413219 PZPP20742 1482 aa23.98■■□□□ 1.43
SDCBP-202ENST00000413219 RNF123Q5XPI4 1314 aa23.98■■□□□ 1.43
SDCBP-202ENST00000413219 KIAA0556O60303 1618 aa23.94■■□□□ 1.42
SDCBP-202ENST00000413219 NUDCQ9Y266 331 aa23.94■■□□□ 1.42
SDCBP-202ENST00000413219 NUP153P49790 1475 aaKnown RBP23.93■■□□□ 1.42
SDCBP-202ENST00000413219 KIF14Q15058 1648 aa23.93■■□□□ 1.42
SDCBP-202ENST00000413219 ADGBQ8N7X0 1667 aa23.92■■□□□ 1.42
SDCBP-202ENST00000413219 KIAA1107Q9UPP5 1409 aa23.92■■□□□ 1.42
SDCBP-202ENST00000413219 RAPGEF6Q8TEU7 1601 aa23.91■■□□□ 1.42
SDCBP-202ENST00000413219 KIAA0586Q9BVV6 1533 aa23.91■■□□□ 1.42
SDCBP-202ENST00000413219 ADGRL2O95490 1459 aa23.91■■□□□ 1.42
SDCBP-202ENST00000413219 DISP1Q96F81 1524 aa23.9■■□□□ 1.42
SDCBP-202ENST00000413219 USP47Q96K76 1375 aa23.9■■□□□ 1.42
SDCBP-202ENST00000413219 ZNF644Q9H582 1327 aaPredicted RBP23.89■■□□□ 1.42
SDCBP-202ENST00000413219 ROCK2O75116 1388 aaKnown RBP23.89■■□□□ 1.42
SDCBP-202ENST00000413219 BCORL1Q5H9F3 1711 aa23.89■■□□□ 1.41
SDCBP-202ENST00000413219 KDM5CP41229 1560 aa23.88■■□□□ 1.41
SDCBP-202ENST00000413219 ITSN2Q9NZM3 1697 aa23.88■■□□□ 1.41
SDCBP-202ENST00000413219 CAMSAP2Q08AD1 1489 aa23.87■■□□□ 1.41
SDCBP-202ENST00000413219 ARID3CA6NKF2 412 aa23.86■■□□□ 1.41
SDCBP-202ENST00000413219 TROQ12816 1431 aaPredicted RBP23.85■■□□□ 1.41
SDCBP-202ENST00000413219 NOP58Q9Y2X3 529 aaKnown RBP23.85■■□□□ 1.41
SDCBP-202ENST00000413219 UHRF1BP1Q6BDS2 1440 aa23.85■■□□□ 1.41
SDCBP-202ENST00000413219 CROCC2H7BZ55 1655 aa23.83■■□□□ 1.41
SDCBP-202ENST00000413219 RALGAPBQ86X10 1494 aa23.82■■□□□ 1.4
SDCBP-202ENST00000413219 MRC2Q9UBG0 1479 aa23.81■■□□□ 1.4
SDCBP-202ENST00000413219 ADCY10Q96PN6 1610 aa23.81■■□□□ 1.4
SDCBP-202ENST00000413219 PNISRQ8TF01 805 aaKnown RBP23.79■■□□□ 1.4
SDCBP-202ENST00000413219 CCDC136Q96JN2 1154 aa23.79■■□□□ 1.4
SDCBP-202ENST00000413219 ARHGEF12Q9NZN5 1544 aa23.79■■□□□ 1.4
SDCBP-202ENST00000413219 KTN1Q86UP2 1357 aaKnown RBP23.79■■□□□ 1.4
SDCBP-202ENST00000413219 GPATCH8Q9UKJ3 1502 aaKnown RBP23.78■■□□□ 1.4
SDCBP-202ENST00000413219 ANKRD30AQ9BXX3 1397 aa23.78■■□□□ 1.4
SDCBP-202ENST00000413219 CFDP1Q9UEE9 299 aaPredicted RBP23.77■■□□□ 1.4
SDCBP-202ENST00000413219 IFT140Q96RY7 1462 aa23.76■■□□□ 1.39
SDCBP-202ENST00000413219 PRG4Q92954 1404 aaPredicted RBP23.76■■□□□ 1.39
SDCBP-202ENST00000413219 PKD2Q13563 968 aa23.75■■□□□ 1.39
SDCBP-202ENST00000413219 KIF15Q9NS87 1388 aa23.75■■□□□ 1.39
SDCBP-202ENST00000413219 LRPPRCP42704 1394 aaKnown RBP23.75■■□□□ 1.39
SDCBP-202ENST00000413219 BRD4O60885 1362 aaPredicted RBP23.73■■□□□ 1.39
SDCBP-202ENST00000413219 DEKP35659 375 aaKnown RBP23.72■■□□□ 1.39
SDCBP-202ENST00000413219 TMC1Q8TDI8 760 aa23.72■■□□□ 1.39
SDCBP-202ENST00000413219 ANP32AP39687 249 aaKnown RBP23.72■■□□□ 1.39
SDCBP-202ENST00000413219 ANKRD50Q9ULJ7 1429 aa23.72■■□□□ 1.39
SDCBP-202ENST00000413219 GRIN2AQ12879 1464 aa23.72■■□□□ 1.39
SDCBP-202ENST00000413219 KDM5DQ9BY66 1539 aa23.71■■□□□ 1.39
SDCBP-202ENST00000413219 SHANK2Q9UPX8 1470 aa23.7■■□□□ 1.39
SDCBP-202ENST00000413219 IPO9Q96P70 1041 aaKnown RBP23.7■■□□□ 1.38
SDCBP-202ENST00000413219 POLR3GLQ9BT43 218 aa23.69■■□□□ 1.38
SDCBP-202ENST00000413219 RALBP1Q15311 655 aa23.68■■□□□ 1.38
SDCBP-202ENST00000413219 ZNF326Q5BKZ1 582 aaKnown RBP23.68■■□□□ 1.38
SDCBP-202ENST00000413219 MYBBP1AQ9BQG0 1328 aaKnown RBP23.67■■□□□ 1.38
SDCBP-202ENST00000413219 ZNF608Q9ULD9 1512 aaPredicted RBP23.67■■□□□ 1.38
SDCBP-202ENST00000413219 PAK3O75914 559 aaPredicted RBP23.67■■□□□ 1.38
SDCBP-202ENST00000413219 E9PCH4 1651 aa23.66■■□□□ 1.38
SDCBP-202ENST00000413219 CARD11Q9BXL7 1154 aa23.65■■□□□ 1.38
SDCBP-202ENST00000413219 DNAJC5BQ9UF47 199 aa23.64■■□□□ 1.38
SDCBP-202ENST00000413219 CEP170Q5SW79 1584 aa23.63■■□□□ 1.37
SDCBP-202ENST00000413219 NUP155O75694 1391 aa23.61■■□□□ 1.37
SDCBP-202ENST00000413219 PLB1Q6P1J6 1458 aa23.61■■□□□ 1.37
SDCBP-202ENST00000413219 PTPRGP23470 1445 aa23.6■■□□□ 1.37
SDCBP-202ENST00000413219 RRP1P56182 461 aaKnown RBP23.6■■□□□ 1.37
SDCBP-202ENST00000413219 CNGB1Q14028 1251 aaPredicted RBP23.6■■□□□ 1.37
SDCBP-202ENST00000413219 ZNF777Q9ULD5 760 aaPredicted RBP23.6■■□□□ 1.37
SDCBP-202ENST00000413219 CDC42BPAQ5VT25 1732 aa23.59■■□□□ 1.37
SDCBP-202ENST00000413219 C9orf84Q5VXU9 1444 aa23.59■■□□□ 1.37
SDCBP-202ENST00000413219 ZBTB47Q9UFB7 747 aaPredicted RBP23.59■■□□□ 1.37
SDCBP-202ENST00000413219 PDE3BQ13370 1112 aa23.58■■□□□ 1.36
SDCBP-202ENST00000413219 ST20-MTHFSA0A0A6YYL1 179 aa23.56■■□□□ 1.36
SDCBP-202ENST00000413219 TCERG1O14776 1098 aaKnown RBP23.56■■□□□ 1.36
SDCBP-202ENST00000413219 EIF4G3O43432 1585 aaKnown RBP23.56■■□□□ 1.36
SDCBP-202ENST00000413219 ABCC10Q5T3U5 1492 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms