RNA–Protein interactions for RNA: ENST00000411849.1

HMGN1P20-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 20, humanhuman

BASIC

Gene HMGN1P20, Length 300 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P20-201ENST00000411849 TTC37Q6PGP7 1564 aa10.27□□□□□ -0.76
HMGN1P20-201ENST00000411849 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.27□□□□□ -0.77
HMGN1P20-201ENST00000411849 HNRNPUL2Q1KMD3 747 aaKnown RBP10.27□□□□□ -0.77
HMGN1P20-201ENST00000411849 P3H3Q8IVL6 736 aa10.27□□□□□ -0.77
HMGN1P20-201ENST00000411849 ZFYVE16Q7Z3T8 1539 aa10.27□□□□□ -0.77
HMGN1P20-201ENST00000411849 SIGLEC1Q9BZZ2 1709 aa10.27□□□□□ -0.77
HMGN1P20-201ENST00000411849 AKNAQ7Z591 1439 aa10.26□□□□□ -0.77
HMGN1P20-201ENST00000411849 NUP153P49790 1475 aaKnown RBP10.26□□□□□ -0.77
HMGN1P20-201ENST00000411849 FHOD3Q2V2M9 1422 aa10.25□□□□□ -0.77
HMGN1P20-201ENST00000411849 MAGI2Q86UL8 1455 aa10.24□□□□□ -0.77
HMGN1P20-201ENST00000411849 HSPA2P54652 639 aa10.24□□□□□ -0.77
HMGN1P20-201ENST00000411849 CERKQ8TCT0 537 aa10.24□□□□□ -0.77
HMGN1P20-201ENST00000411849 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.23□□□□□ -0.77
HMGN1P20-201ENST00000411849 HECW1Q76N89 1606 aa10.22□□□□□ -0.77
HMGN1P20-201ENST00000411849 MYO5CQ9NQX4 1742 aa10.22□□□□□ -0.77
HMGN1P20-201ENST00000411849 PLEKHD1A6NEE1 506 aa10.22□□□□□ -0.77
HMGN1P20-201ENST00000411849 SETD1BQ9UPS6 1966 aaKnown RBP10.21□□□□□ -0.77
HMGN1P20-201ENST00000411849 STRCQ7RTU9 1775 aa10.21□□□□□ -0.78
HMGN1P20-201ENST00000411849 ARHGEF12Q9NZN5 1544 aa10.19□□□□□ -0.78
HMGN1P20-201ENST00000411849 YEATS2Q9ULM3 1422 aa10.19□□□□□ -0.78
HMGN1P20-201ENST00000411849 DISP3Q9P2K9 1392 aa10.18□□□□□ -0.78
HMGN1P20-201ENST00000411849 C1QBPQ07021 282 aaKnown RBP10.18□□□□□ -0.78
HMGN1P20-201ENST00000411849 ATP10AO60312 1499 aa10.17□□□□□ -0.78
HMGN1P20-201ENST00000411849 MLECQ14165 292 aa10.17□□□□□ -0.78
HMGN1P20-201ENST00000411849 C9orf84Q5VXU9 1444 aa10.16□□□□□ -0.78
HMGN1P20-201ENST00000411849 SOCS7O14512 581 aa10.16□□□□□ -0.78
HMGN1P20-201ENST00000411849 CSRNP3Q8WYN3 585 aa10.16□□□□□ -0.78
HMGN1P20-201ENST00000411849 SPATA31D1Q6ZQQ2 1576 aa10.16□□□□□ -0.78
HMGN1P20-201ENST00000411849 SCAPERQ9BY12 1400 aa10.16□□□□□ -0.78
HMGN1P20-201ENST00000411849 C3P01024 1663 aa10.15□□□□□ -0.79
HMGN1P20-201ENST00000411849 PLCH2O75038 1416 aa10.15□□□□□ -0.79
HMGN1P20-201ENST00000411849 UHRF1BP1Q6BDS2 1440 aa10.14□□□□□ -0.79
HMGN1P20-201ENST00000411849 CDK13Q14004 1512 aaKnown RBP10.13□□□□□ -0.79
HMGN1P20-201ENST00000411849 RANGAP1P46060 587 aaPredicted RBP10.13□□□□□ -0.79
HMGN1P20-201ENST00000411849 EEA1Q15075 1411 aa10.13□□□□□ -0.79
HMGN1P20-201ENST00000411849 ZNF518AQ6AHZ1 1483 aa10.12□□□□□ -0.79
HMGN1P20-201ENST00000411849 KIF14Q15058 1648 aa10.12□□□□□ -0.79
HMGN1P20-201ENST00000411849 KDM5CP41229 1560 aa10.12□□□□□ -0.79
HMGN1P20-201ENST00000411849 REREQ9P2R6 1566 aa10.12□□□□□ -0.79
HMGN1P20-201ENST00000411849 ILDR2Q71H61 639 aa10.11□□□□□ -0.79
HMGN1P20-201ENST00000411849 DIP2CQ9Y2E4 1556 aa10.1□□□□□ -0.79
HMGN1P20-201ENST00000411849 PTPRTO14522 1441 aa10.1□□□□□ -0.79
HMGN1P20-201ENST00000411849 EFCAB2Q5VUJ9 269 aa10.1□□□□□ -0.79
HMGN1P20-201ENST00000411849 SUPT6HQ7KZ85 1726 aaKnown RBP10.1□□□□□ -0.79
HMGN1P20-201ENST00000411849 IQSEC2Q5JU85 1478 aa10.1□□□□□ -0.79
HMGN1P20-201ENST00000411849 ARHGAP5Q13017 1502 aa10.09□□□□□ -0.79
HMGN1P20-201ENST00000411849 ABCA6Q8N139 1617 aa10.09□□□□□ -0.79
HMGN1P20-201ENST00000411849 CEBPAP49715 358 aaPredicted RBP10.09□□□□□ -0.79
HMGN1P20-201ENST00000411849 CDC42BPBQ9Y5S2 1711 aa10.09□□□□□ -0.79
HMGN1P20-201ENST00000411849 LRRIQ1Q96JM4 1722 aa10.07□□□□□ -0.8
HMGN1P20-201ENST00000411849 MROH2AA6NES4 1674 aa10.07□□□□□ -0.8
HMGN1P20-201ENST00000411849 ITSN2Q9NZM3 1697 aa10.07□□□□□ -0.8
HMGN1P20-201ENST00000411849 CDK11AQ9UQ88 783 aaPredicted RBP10.07□□□□□ -0.8
HMGN1P20-201ENST00000411849 LTBP4Q8N2S1 1624 aa10.07□□□□□ -0.8
HMGN1P20-201ENST00000411849 FMN1Q68DA7 1419 aa10.07□□□□□ -0.8
HMGN1P20-201ENST00000411849 ESF1Q9H501 851 aaKnown RBP10.06□□□□□ -0.8
HMGN1P20-201ENST00000411849 MYT1LQ9UL68 1186 aa10.06□□□□□ -0.8
HMGN1P20-201ENST00000411849 PREX2Q70Z35 1606 aa10.06□□□□□ -0.8
HMGN1P20-201ENST00000411849 AGLP35573 1532 aa10.06□□□□□ -0.8
HMGN1P20-201ENST00000411849 CLIP1P30622 1438 aa10.05□□□□□ -0.8
HMGN1P20-201ENST00000411849 MLH3Q9UHC1 1453 aa10.04□□□□□ -0.8
HMGN1P20-201ENST00000411849 NPM3O75607 178 aaKnown RBP10.04□□□□□ -0.8
HMGN1P20-201ENST00000411849 CNTLNQ9NXG0 1405 aa10.04□□□□□ -0.8
HMGN1P20-201ENST00000411849 TRAPPC8Q9Y2L5 1435 aa10.04□□□□□ -0.8
HMGN1P20-201ENST00000411849 KIDINS220Q9ULH0 1771 aa10.03□□□□□ -0.8
HMGN1P20-201ENST00000411849 TROQ12816 1431 aaPredicted RBP10.03□□□□□ -0.8
HMGN1P20-201ENST00000411849 CDC42BPAQ5VT25 1732 aa10.03□□□□□ -0.8
HMGN1P20-201ENST00000411849 AFAP1Q8N556 730 aa10.03□□□□□ -0.8
HMGN1P20-201ENST00000411849 ATP1B4Q9UN42 357 aaPredicted RBP10.03□□□□□ -0.8
HMGN1P20-201ENST00000411849 ZNF142P52746 1687 aaPredicted RBP10.02□□□□□ -0.8
HMGN1P20-201ENST00000411849 ABCC1P33527 1531 aa10.02□□□□□ -0.8
HMGN1P20-201ENST00000411849 NCOA1Q15788 1441 aa10.02□□□□□ -0.81
HMGN1P20-201ENST00000411849 CAMSAP1Q5T5Y3 1602 aa10.02□□□□□ -0.81
HMGN1P20-201ENST00000411849 NPATQ14207 1427 aa10□□□□□ -0.81
HMGN1P20-201ENST00000411849 NCBP3Q53F19 620 aaKnown RBP10□□□□□ -0.81
HMGN1P20-201ENST00000411849 MYO3AQ8NEV4 1616 aa10□□□□□ -0.81
HMGN1P20-201ENST00000411849 CLTCQ00610 1675 aaKnown RBP9.99□□□□□ -0.81
HMGN1P20-201ENST00000411849 ARHGAP35Q9NRY4 1499 aa9.99□□□□□ -0.81
HMGN1P20-201ENST00000411849 CCDC18Q5T9S5 1454 aa9.97□□□□□ -0.81
HMGN1P20-201ENST00000411849 SAMD9LQ8IVG5 1584 aa9.97□□□□□ -0.81
HMGN1P20-201ENST00000411849 CEP170BQ9Y4F5 1589 aaPredicted RBP9.97□□□□□ -0.81
HMGN1P20-201ENST00000411849 POLR1AO95602 1720 aaPredicted RBP9.96□□□□□ -0.81
HMGN1P20-201ENST00000411849 UBTFP17480 764 aaKnown RBP9.96□□□□□ -0.82
HMGN1P20-201ENST00000411849 PLA2R1Q13018 1463 aa9.96□□□□□ -0.82
HMGN1P20-201ENST00000411849 UBAP1LF5GYI3 381 aa9.95□□□□□ -0.82
HMGN1P20-201ENST00000411849 ADGBQ8N7X0 1667 aa9.95□□□□□ -0.82
HMGN1P20-201ENST00000411849 PLXNC1O60486 1568 aa9.93□□□□□ -0.82
HMGN1P20-201ENST00000411849 INO80Q9ULG1 1556 aaPredicted RBP9.93□□□□□ -0.82
HMGN1P20-201ENST00000411849 ATP7AQ04656 1500 aa9.93□□□□□ -0.82
HMGN1P20-201ENST00000411849 ZMYM3Q14202 1370 aa9.93□□□□□ -0.82
HMGN1P20-201ENST00000411849 ZNF335Q9H4Z2 1342 aaPredicted RBP9.93□□□□□ -0.82
HMGN1P20-201ENST00000411849 PKD2Q13563 968 aa9.93□□□□□ -0.82
HMGN1P20-201ENST00000411849 SYCP2Q9BX26 1530 aa9.92□□□□□ -0.82
HMGN1P20-201ENST00000411849 TCOF1Q13428 1488 aaKnown RBP9.92□□□□□ -0.82
HMGN1P20-201ENST00000411849 NCKAP5LQ9HCH0 1330 aa9.92□□□□□ -0.82
HMGN1P20-201ENST00000411849 MED1Q15648 1581 aaPredicted RBP9.92□□□□□ -0.82
HMGN1P20-201ENST00000411849 CASKIN1Q8WXD9 1431 aa9.91□□□□□ -0.82
HMGN1P20-201ENST00000411849 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.91□□□□□ -0.82
HMGN1P20-201ENST00000411849 PLEKHH2Q8IVE3 1493 aa9.9□□□□□ -0.83
HMGN1P20-201ENST00000411849 PTPRKQ15262 1439 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms