RNA–Protein interactions for RNA: ENST00000404933.6

SMS-202, Transcript of spermine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMS, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-202ENST00000404933 UHRF1BP1LA0JNW5 1464 aa17.27■□□□□ 0.36
SMS-202ENST00000404933 ABCC5O15440 1437 aa17.27■□□□□ 0.36
SMS-202ENST00000404933 ZNF644Q9H582 1327 aaPredicted RBP17.26■□□□□ 0.35
SMS-202ENST00000404933 RRP7BPQ9NSQ0 103 aa17.26■□□□□ 0.35
SMS-202ENST00000404933 ZNF316A6NFI3 1004 aaPredicted RBP17.24■□□□□ 0.35
SMS-202ENST00000404933 ACIN1Q9UKV3 1341 aaKnown RBP17.24■□□□□ 0.35
SMS-202ENST00000404933 CROCC2H7BZ55 1655 aa17.22■□□□□ 0.35
SMS-202ENST00000404933 ADGBQ8N7X0 1667 aa17.22■□□□□ 0.35
SMS-202ENST00000404933 ZNF777Q9ULD5 760 aaPredicted RBP17.21■□□□□ 0.35
SMS-202ENST00000404933 ZCCHC11Q5TAX3 1644 aaKnown RBP17.21■□□□□ 0.35
SMS-202ENST00000404933 PREX2Q70Z35 1606 aa17.2■□□□□ 0.34
SMS-202ENST00000404933 KDM5BQ9UGL1 1544 aa17.2■□□□□ 0.34
SMS-202ENST00000404933 KDM6BO15054 1643 aa17.18■□□□□ 0.34
SMS-202ENST00000404933 SCAF1Q9H7N4 1312 aaKnown RBP17.18■□□□□ 0.34
SMS-202ENST00000404933 CDC42BPBQ9Y5S2 1711 aa17.18■□□□□ 0.34
SMS-202ENST00000404933 OSCARQ8IYS5 282 aa17.18■□□□□ 0.34
SMS-202ENST00000404933 TIMELESSQ9UNS1 1208 aa17.18■□□□□ 0.34
SMS-202ENST00000404933 ADGRL2O95490 1459 aa17.17■□□□□ 0.34
SMS-202ENST00000404933 SHANK2Q9UPX8 1470 aa17.16■□□□□ 0.34
SMS-202ENST00000404933 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.16■□□□□ 0.34
SMS-202ENST00000404933 TTC37Q6PGP7 1564 aa17.15■□□□□ 0.34
SMS-202ENST00000404933 MYO5CQ9NQX4 1742 aa17.15■□□□□ 0.34
SMS-202ENST00000404933 ARHGEF5Q12774 1597 aa17.15■□□□□ 0.34
SMS-202ENST00000404933 SIN3AQ96ST3 1273 aa17.14■□□□□ 0.34
SMS-202ENST00000404933 NCOA1Q15788 1441 aa17.14■□□□□ 0.33
SMS-202ENST00000404933 NEUROD1Q13562 356 aa17.13■□□□□ 0.33
SMS-202ENST00000404933 DIEXFQ68CQ4 756 aaKnown RBP17.13■□□□□ 0.33
SMS-202ENST00000404933 TRIM52Q96A61 297 aa17.13■□□□□ 0.33
SMS-202ENST00000404933 ANKRD30AQ9BXX3 1397 aa17.13■□□□□ 0.33
SMS-202ENST00000404933 SAMD9LQ8IVG5 1584 aa17.13■□□□□ 0.33
SMS-202ENST00000404933 ARHGAP5Q13017 1502 aa17.1■□□□□ 0.33
SMS-202ENST00000404933 C9orf84Q5VXU9 1444 aa17.1■□□□□ 0.33
SMS-202ENST00000404933 RSPH4AQ5TD94 716 aa17.1■□□□□ 0.33
SMS-202ENST00000404933 MBD5Q9P267 1494 aa17.09■□□□□ 0.33
SMS-202ENST00000404933 TSPY4P0CV99 314 aa17.09■□□□□ 0.33
SMS-202ENST00000404933 TSPY10P0CW01 314 aa17.09■□□□□ 0.33
SMS-202ENST00000404933 KCNH8Q96L42 1107 aa17.08■□□□□ 0.33
SMS-202ENST00000404933 CCDC141Q6ZP82 1450 aa17.08■□□□□ 0.32
SMS-202ENST00000404933 PLEKHH2Q8IVE3 1493 aa17.08■□□□□ 0.32
SMS-202ENST00000404933 MPHOSPH9Q99550 1183 aa17.07■□□□□ 0.32
SMS-202ENST00000404933 DENND4BO75064 1496 aaPredicted RBP17.07■□□□□ 0.32
SMS-202ENST00000404933 HNRNPMP52272 730 aaKnown RBP eCLIP17.06■□□□□ 0.32
SMS-202ENST00000404933 PLCH2O75038 1416 aa17.05■□□□□ 0.32
SMS-202ENST00000404933 TONSLQ96HA7 1378 aa17.05■□□□□ 0.32
SMS-202ENST00000404933 KIAA1107Q9UPP5 1409 aa17.04■□□□□ 0.32
SMS-202ENST00000404933 CENPBP07199 599 aaPredicted RBP17.04■□□□□ 0.32
SMS-202ENST00000404933 SYCP2Q9BX26 1530 aa17.04■□□□□ 0.32
SMS-202ENST00000404933 WDR7Q9Y4E6 1490 aa17.04■□□□□ 0.32
SMS-202ENST00000404933 ANKRD50Q9ULJ7 1429 aa17.03■□□□□ 0.32
SMS-202ENST00000404933 MAST1Q9Y2H9 1570 aa17.02■□□□□ 0.32
SMS-202ENST00000404933 PPP1R15AO75807 674 aaPredicted RBP17.02■□□□□ 0.31
SMS-202ENST00000404933 ARAP3Q8WWN8 1544 aa17.01■□□□□ 0.31
SMS-202ENST00000404933 EFCAB2Q5VUJ9 269 aa17■□□□□ 0.31
SMS-202ENST00000404933 KIF15Q9NS87 1388 aa17■□□□□ 0.31
SMS-202ENST00000404933 SLC4A1APQ9BWU0 796 aaKnown RBP16.99■□□□□ 0.31
SMS-202ENST00000404933 PZPP20742 1482 aa16.99■□□□□ 0.31
SMS-202ENST00000404933 ABCA9Q8IUA7 1624 aa16.97■□□□□ 0.31
SMS-202ENST00000404933 MYT1Q01538 1121 aa16.97■□□□□ 0.31
SMS-202ENST00000404933 ABCC1P33527 1531 aa16.96■□□□□ 0.31
SMS-202ENST00000404933 ANKRD30BQ9BXX2 1392 aa16.96■□□□□ 0.31
SMS-202ENST00000404933 ASXL2Q76L83 1435 aa16.96■□□□□ 0.31
SMS-202ENST00000404933 NPM1P06748 294 aaKnown RBP eCLIP16.96■□□□□ 0.3
SMS-202ENST00000404933 PLXNC1O60486 1568 aa16.96■□□□□ 0.3
SMS-202ENST00000404933 KDM5DQ9BY66 1539 aa16.94■□□□□ 0.3
SMS-202ENST00000404933 ARHGEF12Q9NZN5 1544 aa16.94■□□□□ 0.3
SMS-202ENST00000404933 FOXD1Q16676 465 aa16.93■□□□□ 0.3
SMS-202ENST00000404933 RPRD2Q5VT52 1461 aaKnown RBP16.92■□□□□ 0.3
SMS-202ENST00000404933 NUP155O75694 1391 aa16.91■□□□□ 0.3
SMS-202ENST00000404933 DUOX2Q9NRD8 1548 aa16.89■□□□□ 0.29
SMS-202ENST00000404933 FANCAO15360 1455 aa16.89■□□□□ 0.29
SMS-202ENST00000404933 PKD2Q13563 968 aa16.87■□□□□ 0.29
SMS-202ENST00000404933 TRAPPC8Q9Y2L5 1435 aa16.87■□□□□ 0.29
SMS-202ENST00000404933 UNC13BO14795 1591 aa16.86■□□□□ 0.29
SMS-202ENST00000404933 RTEL1-TNFRSF6BF6WH68 1400 aa16.86■□□□□ 0.29
SMS-202ENST00000404933 ERBINQ96RT1 1412 aa16.85■□□□□ 0.29
SMS-202ENST00000404933 L3MBTL2Q969R5 705 aa16.84■□□□□ 0.29
SMS-202ENST00000404933 FAM135AQ9P2D6 1515 aa16.83■□□□□ 0.29
SMS-202ENST00000404933 SPAG9O60271 1321 aaKnown RBP16.83■□□□□ 0.29
SMS-202ENST00000404933 TEX14Q8IWB6 1497 aa16.82■□□□□ 0.28
SMS-202ENST00000404933 ADGRL1O94910 1474 aa16.82■□□□□ 0.28
SMS-202ENST00000404933 ZFYVE16Q7Z3T8 1539 aa16.82■□□□□ 0.28
SMS-202ENST00000404933 CFAP74Q9C0B2 1584 aa16.81■□□□□ 0.28
SMS-202ENST00000404933 IQGAP3Q86VI3 1631 aa16.81■□□□□ 0.28
SMS-202ENST00000404933 MIER1Q8N108 512 aa16.8■□□□□ 0.28
SMS-202ENST00000404933 INO80Q9ULG1 1556 aaPredicted RBP16.79■□□□□ 0.28
SMS-202ENST00000404933 SCAPERQ9BY12 1400 aa16.79■□□□□ 0.28
SMS-202ENST00000404933 MAGI2Q86UL8 1455 aa16.79■□□□□ 0.28
SMS-202ENST00000404933 AFAP1Q8N556 730 aa16.79■□□□□ 0.28
SMS-202ENST00000404933 CD109Q6YHK3 1445 aa16.78■□□□□ 0.28
SMS-202ENST00000404933 ATP7AQ04656 1500 aa16.78■□□□□ 0.28
SMS-202ENST00000404933 RIMBP3CA6NJZ7 1639 aa16.77■□□□□ 0.28
SMS-202ENST00000404933 RIMBP3BA6NNM3 1639 aa16.77■□□□□ 0.28
SMS-202ENST00000404933 RIMBP3Q9UFD9 1639 aa16.77■□□□□ 0.28
SMS-202ENST00000404933 GTF3C3Q9Y5Q9 886 aa16.77■□□□□ 0.27
SMS-202ENST00000404933 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.74■□□□□ 0.272e-6■□□□□ 9.7
SMS-202ENST00000404933 ZNF518AQ6AHZ1 1483 aa16.73■□□□□ 0.27
SMS-202ENST00000404933 CYB5RLQ6IPT4 315 aa16.72■□□□□ 0.27
SMS-202ENST00000404933 DEPDC5O75140 1603 aa16.71■□□□□ 0.27
SMS-202ENST00000404933 HIRIP3Q9BW71 556 aaPredicted RBP16.7■□□□□ 0.26
SMS-202ENST00000404933 EIF2AK4Q9P2K8 1649 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms