RNA–Protein interactions for RNA: ENST00000402802.7

PDGFA-203, Transcript of platelet derived growth factor subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFA, Length 2,305 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-203ENST00000402802 MIA2Q96PC5 1412 aa23.04■■□□□ 1.28
PDGFA-203ENST00000402802 SETD5Q9C0A6 1442 aa23.04■■□□□ 1.28
PDGFA-203ENST00000402802 ADCY10Q96PN6 1610 aa23.04■■□□□ 1.28
PDGFA-203ENST00000402802 DHX57Q6P158 1386 aaKnown RBP23.04■■□□□ 1.28
PDGFA-203ENST00000402802 GPATCH8Q9UKJ3 1502 aaKnown RBP23.03■■□□□ 1.28
PDGFA-203ENST00000402802 CFDP1Q9UEE9 299 aaPredicted RBP23.03■■□□□ 1.28
PDGFA-203ENST00000402802 KCNH8Q96L42 1107 aa23■■□□□ 1.27
PDGFA-203ENST00000402802 ABCC10Q5T3U5 1492 aa23■■□□□ 1.27
PDGFA-203ENST00000402802 RRP7BPQ9NSQ0 103 aa22.98■■□□□ 1.27
PDGFA-203ENST00000402802 ZCCHC11Q5TAX3 1644 aaKnown RBP22.98■■□□□ 1.27
PDGFA-203ENST00000402802 UHRF1BP1LA0JNW5 1464 aa22.96■■□□□ 1.27
PDGFA-203ENST00000402802 CAMSAP2Q08AD1 1489 aa22.94■■□□□ 1.26
PDGFA-203ENST00000402802 KDM5BQ9UGL1 1544 aa22.94■■□□□ 1.26
PDGFA-203ENST00000402802 CDC42BPAQ5VT25 1732 aa22.94■■□□□ 1.26
PDGFA-203ENST00000402802 ITSN2Q9NZM3 1697 aa22.93■■□□□ 1.26
PDGFA-203ENST00000402802 AEBP2Q6ZN18 517 aaPredicted RBP22.91■■□□□ 1.26
PDGFA-203ENST00000402802 ABCC5O15440 1437 aa22.91■■□□□ 1.26
PDGFA-203ENST00000402802 DAPK1P53355 1430 aa22.91■■□□□ 1.26
PDGFA-203ENST00000402802 HFM1A2PYH4 1435 aa22.9■■□□□ 1.26
PDGFA-203ENST00000402802 NAIPQ13075 1403 aa22.9■■□□□ 1.26
PDGFA-203ENST00000402802 TTC37Q6PGP7 1564 aa22.9■■□□□ 1.26
PDGFA-203ENST00000402802 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.88■■□□□ 1.252e-6■■■■■ 37.8
PDGFA-203ENST00000402802 DNMT1P26358 1616 aaKnown RBP22.86■■□□□ 1.25
PDGFA-203ENST00000402802 HNRNPMP52272 730 aaKnown RBP eCLIP22.83■■□□□ 1.25
PDGFA-203ENST00000402802 KDM6BO15054 1643 aa22.82■■□□□ 1.24
PDGFA-203ENST00000402802 CDC42BPBQ9Y5S2 1711 aa22.82■■□□□ 1.24
PDGFA-203ENST00000402802 MAPKBP1O60336 1514 aa22.81■■□□□ 1.24
PDGFA-203ENST00000402802 PREX2Q70Z35 1606 aa22.8■■□□□ 1.24
PDGFA-203ENST00000402802 ARHGAP5Q13017 1502 aa22.78■■□□□ 1.24
PDGFA-203ENST00000402802 SAMD9LQ8IVG5 1584 aa22.77■■□□□ 1.24
PDGFA-203ENST00000402802 AKNAQ7Z591 1439 aa22.77■■□□□ 1.24
PDGFA-203ENST00000402802 WDR7Q9Y4E6 1490 aa22.76■■□□□ 1.23
PDGFA-203ENST00000402802 GCC2Q8IWJ2 1684 aa22.75■■□□□ 1.23
PDGFA-203ENST00000402802 CYB5RLQ6IPT4 315 aa22.75■■□□□ 1.23
PDGFA-203ENST00000402802 ASXL2Q76L83 1435 aa22.75■■□□□ 1.23
PDGFA-203ENST00000402802 TRIM52Q96A61 297 aa22.73■■□□□ 1.23
PDGFA-203ENST00000402802 MYO5CQ9NQX4 1742 aa22.73■■□□□ 1.23
PDGFA-203ENST00000402802 NPM1P06748 294 aaKnown RBP eCLIP22.73■■□□□ 1.23
PDGFA-203ENST00000402802 SIN3AQ96ST3 1273 aa22.73■■□□□ 1.23
PDGFA-203ENST00000402802 ROCK1Q13464 1354 aa22.72■■□□□ 1.23
PDGFA-203ENST00000402802 MBD5Q9P267 1494 aa22.71■■□□□ 1.23
PDGFA-203ENST00000402802 CROCC2H7BZ55 1655 aa22.71■■□□□ 1.23
PDGFA-203ENST00000402802 SYCP2Q9BX26 1530 aa22.7■■□□□ 1.23
PDGFA-203ENST00000402802 NCOA1Q15788 1441 aa22.7■■□□□ 1.22
PDGFA-203ENST00000402802 PLCH2O75038 1416 aa22.69■■□□□ 1.22
PDGFA-203ENST00000402802 C9orf84Q5VXU9 1444 aa22.68■■□□□ 1.22
PDGFA-203ENST00000402802 RIMBP3CA6NJZ7 1639 aa22.68■■□□□ 1.22
PDGFA-203ENST00000402802 RIMBP3BA6NNM3 1639 aa22.68■■□□□ 1.22
PDGFA-203ENST00000402802 RIMBP3Q9UFD9 1639 aa22.68■■□□□ 1.22
PDGFA-203ENST00000402802 TSPY4P0CV99 314 aa22.66■■□□□ 1.22
PDGFA-203ENST00000402802 TSPY10P0CW01 314 aa22.66■■□□□ 1.22
PDGFA-203ENST00000402802 ARHGEF12Q9NZN5 1544 aa22.65■■□□□ 1.22
PDGFA-203ENST00000402802 ADGBQ8N7X0 1667 aa22.65■■□□□ 1.22
PDGFA-203ENST00000402802 ANKRD30AQ9BXX3 1397 aa22.64■■□□□ 1.21
PDGFA-203ENST00000402802 EFCAB2Q5VUJ9 269 aa22.64■■□□□ 1.21
PDGFA-203ENST00000402802 ADGRL2O95490 1459 aa22.63■■□□□ 1.21
PDGFA-203ENST00000402802 CCDC141Q6ZP82 1450 aa22.63■■□□□ 1.21
PDGFA-203ENST00000402802 ARHGEF5Q12774 1597 aa22.63■■□□□ 1.21
PDGFA-203ENST00000402802 FOXD1Q16676 465 aa22.62■■□□□ 1.21
PDGFA-203ENST00000402802 DENND4BO75064 1496 aaPredicted RBP22.61■■□□□ 1.21
PDGFA-203ENST00000402802 SHANK2Q9UPX8 1470 aa22.61■■□□□ 1.21
PDGFA-203ENST00000402802 ABCA9Q8IUA7 1624 aa22.58■■□□□ 1.21
PDGFA-203ENST00000402802 MPHOSPH9Q99550 1183 aa22.58■■□□□ 1.2
PDGFA-203ENST00000402802 KIF15Q9NS87 1388 aa22.57■■□□□ 1.2
PDGFA-203ENST00000402802 ANKRD50Q9ULJ7 1429 aa22.57■■□□□ 1.2
PDGFA-203ENST00000402802 TRAPPC8Q9Y2L5 1435 aa22.57■■□□□ 1.2
PDGFA-203ENST00000402802 KIAA1107Q9UPP5 1409 aa22.56■■□□□ 1.2
PDGFA-203ENST00000402802 ABCC1P33527 1531 aa22.55■■□□□ 1.2
PDGFA-203ENST00000402802 RBM19Q9Y4C8 960 aaKnown RBP22.55■■□□□ 1.2
PDGFA-203ENST00000402802 FANCAO15360 1455 aa22.54■■□□□ 1.2
PDGFA-203ENST00000402802 AFAP1Q8N556 730 aa22.54■■□□□ 1.2
PDGFA-203ENST00000402802 ERICH6Q7L0X2 663 aa22.54■■□□□ 1.2
PDGFA-203ENST00000402802 PLEKHH2Q8IVE3 1493 aa22.54■■□□□ 1.2
PDGFA-203ENST00000402802 RSPH4AQ5TD94 716 aa22.53■■□□□ 1.2
PDGFA-203ENST00000402802 SLC4A1APQ9BWU0 796 aaKnown RBP22.51■■□□□ 1.19
PDGFA-203ENST00000402802 ARAP3Q8WWN8 1544 aa22.48■■□□□ 1.19
PDGFA-203ENST00000402802 CD109Q6YHK3 1445 aa22.48■■□□□ 1.19
PDGFA-203ENST00000402802 PZPP20742 1482 aa22.47■■□□□ 1.19
PDGFA-203ENST00000402802 FKBP8Q14318 412 aa22.47■■□□□ 1.19
PDGFA-203ENST00000402802 BCANQ96GW7 911 aa22.47■■□□□ 1.19
PDGFA-203ENST00000402802 ADGRL1O94910 1474 aa22.45■■□□□ 1.19
PDGFA-203ENST00000402802 SCAPERQ9BY12 1400 aa22.45■■□□□ 1.18
PDGFA-203ENST00000402802 MAST1Q9Y2H9 1570 aa22.45■■□□□ 1.18
PDGFA-203ENST00000402802 NUP155O75694 1391 aa22.44■■□□□ 1.18
PDGFA-203ENST00000402802 SPAG9O60271 1321 aaKnown RBP22.43■■□□□ 1.18
PDGFA-203ENST00000402802 MYT1LQ9UL68 1186 aa22.41■■□□□ 1.18
PDGFA-203ENST00000402802 PKD2Q13563 968 aa22.4■■□□□ 1.18
PDGFA-203ENST00000402802 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.4■■□□□ 1.18
PDGFA-203ENST00000402802 TONSLQ96HA7 1378 aa22.39■■□□□ 1.18
PDGFA-203ENST00000402802 PLXNC1O60486 1568 aa22.38■■□□□ 1.17
PDGFA-203ENST00000402802 ANKRD30BQ9BXX2 1392 aa22.37■■□□□ 1.17
PDGFA-203ENST00000402802 ZFYVE16Q7Z3T8 1539 aa22.37■■□□□ 1.17
PDGFA-203ENST00000402802 NEFLP07196 543 aa22.36■■□□□ 1.17
PDGFA-203ENST00000402802 FAM69CQ0P6D2 419 aa22.35■■□□□ 1.17
PDGFA-203ENST00000402802 PPP1R15AO75807 674 aaPredicted RBP22.34■■□□□ 1.17
PDGFA-203ENST00000402802 DUOX2Q9NRD8 1548 aa22.33■■□□□ 1.16
PDGFA-203ENST00000402802 MSH5O43196 834 aa22.32■■□□□ 1.16
PDGFA-203ENST00000402802 ATP7AQ04656 1500 aa22.31■■□□□ 1.16
PDGFA-203ENST00000402802 RAPGEF3O95398 923 aa22.3■■□□□ 1.16
PDGFA-203ENST00000402802 TIMELESSQ9UNS1 1208 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms